data_6DY1
#
_model_server_result.job_id            zNJT4wSJgHJG6L0eP8DbeA 
_model_server_result.datetime_utc      '2024-11-15 00:35:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6dy1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":414}' 
#
_entry.id    6DY1 
#
_exptl.entry_id    6DY1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              35.453 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHLORIDE ION' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6DY1 
_cell.length_a            159.351 
_cell.length_b            159.351 
_cell.length_c            159.351 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6DY1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        212 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 N N N 
? 5 O N N 
? 5 P N N 
? 5 Q N N 
? 5 R N N 
? 5 S N N 
? 5 T N N 
? 5 U N N 
? 5 V N N 
? 5 W N N 
? 5 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A ND2 ASN 19 A ASN 39 1_555 C C1 NAG . A NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale2 A ND2 ASN 89 A ASN 109 1_555 D C1 NAG . A NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale3 B ND2 ASN 208 B ASN 335 1_555 I C1 NAG . B NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
#
_chem_comp.formula           'Cl -1' 
_chem_comp.formula_weight    35.453 
_chem_comp.id                CL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHLORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6DY1 
_atom_sites.fract_transf_matrix[1][1]    0.006275 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006275 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006275 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NAG A 1 201 1 NAG NAG . 
D 3 NAG A 1 202 2 NAG NAG . 
E 4 SO4 A 1 203 5 SO4 SO4 . 
F 5 CL A 1 204 5 CL CL . 
G 6 TON A 1 205 1 TON TON . 
H 6 TON A 1 206 2 TON TON . 
I 3 NAG B 1 401 3 NAG NAG . 
J 4 SO4 B 1 402 1 SO4 SO4 . 
K 4 SO4 B 1 403 2 SO4 SO4 . 
L 4 SO4 B 1 404 3 SO4 SO4 . 
M 4 SO4 B 1 405 4 SO4 SO4 . 
N 5 CL B 1 406 1 CL CL . 
O 5 CL B 1 407 2 CL CL . 
P 5 CL B 1 408 3 CL CL . 
Q 5 CL B 1 409 4 CL CL . 
R 5 CL B 1 410 6 CL CL . 
S 5 CL B 1 411 7 CL CL . 
T 5 CL B 1 412 8 CL CL . 
U 5 CL B 1 413 9 CL CL . 
V 5 CL B 1 414 10 CL CL . 
W 5 CL B 1 415 11 CL CL . 
X 5 CL B 1 416 12 CL CL . 
Y 7 MYR B 1 417 1 MYR MYR . 
Z 8 HOH A 1 301 16 HOH HOH . 
Z 8 HOH A 2 302 3 HOH HOH . 
Z 8 HOH A 3 303 40 HOH HOH . 
Z 8 HOH A 4 304 5 HOH HOH . 
Z 8 HOH A 5 305 34 HOH HOH . 
Z 8 HOH A 6 306 86 HOH HOH . 
Z 8 HOH A 7 307 63 HOH HOH . 
Z 8 HOH A 8 308 77 HOH HOH . 
Z 8 HOH A 9 309 64 HOH HOH . 
Z 8 HOH A 10 310 32 HOH HOH . 
Z 8 HOH A 11 311 10 HOH HOH . 
Z 8 HOH A 12 312 52 HOH HOH . 
Z 8 HOH A 13 313 41 HOH HOH . 
Z 8 HOH A 14 314 55 HOH HOH . 
Z 8 HOH A 15 315 87 HOH HOH . 
Z 8 HOH A 16 316 20 HOH HOH . 
Z 8 HOH A 17 317 54 HOH HOH . 
Z 8 HOH A 18 318 36 HOH HOH . 
Z 8 HOH A 19 319 17 HOH HOH . 
Z 8 HOH A 20 320 53 HOH HOH . 
Z 8 HOH A 21 321 11 HOH HOH . 
Z 8 HOH A 22 322 68 HOH HOH . 
Z 8 HOH A 23 323 62 HOH HOH . 
Z 8 HOH A 24 324 22 HOH HOH . 
Z 8 HOH A 25 325 70 HOH HOH . 
AA 8 HOH B 1 501 79 HOH HOH . 
AA 8 HOH B 2 502 21 HOH HOH . 
AA 8 HOH B 3 503 6 HOH HOH . 
AA 8 HOH B 4 504 42 HOH HOH . 
AA 8 HOH B 5 505 1 HOH HOH . 
AA 8 HOH B 6 506 78 HOH HOH . 
AA 8 HOH B 7 507 27 HOH HOH . 
AA 8 HOH B 8 508 46 HOH HOH . 
AA 8 HOH B 9 509 15 HOH HOH . 
AA 8 HOH B 10 510 2 HOH HOH . 
AA 8 HOH B 11 511 67 HOH HOH . 
AA 8 HOH B 12 512 43 HOH HOH . 
AA 8 HOH B 13 513 12 HOH HOH . 
AA 8 HOH B 14 514 80 HOH HOH . 
AA 8 HOH B 15 515 9 HOH HOH . 
AA 8 HOH B 16 516 66 HOH HOH . 
AA 8 HOH B 17 517 18 HOH HOH . 
AA 8 HOH B 18 518 4 HOH HOH . 
AA 8 HOH B 19 519 47 HOH HOH . 
AA 8 HOH B 20 520 57 HOH HOH . 
AA 8 HOH B 21 521 60 HOH HOH . 
AA 8 HOH B 22 522 7 HOH HOH . 
AA 8 HOH B 23 523 65 HOH HOH . 
AA 8 HOH B 24 524 13 HOH HOH . 
AA 8 HOH B 25 525 14 HOH HOH . 
AA 8 HOH B 26 526 23 HOH HOH . 
AA 8 HOH B 27 527 76 HOH HOH . 
AA 8 HOH B 28 528 74 HOH HOH . 
AA 8 HOH B 29 529 24 HOH HOH . 
AA 8 HOH B 30 530 33 HOH HOH . 
AA 8 HOH B 31 531 31 HOH HOH . 
AA 8 HOH B 32 532 49 HOH HOH . 
AA 8 HOH B 33 533 84 HOH HOH . 
AA 8 HOH B 34 534 71 HOH HOH . 
AA 8 HOH B 35 535 19 HOH HOH . 
AA 8 HOH B 36 536 48 HOH HOH . 
AA 8 HOH B 37 537 81 HOH HOH . 
AA 8 HOH B 38 538 26 HOH HOH . 
AA 8 HOH B 39 539 44 HOH HOH . 
AA 8 HOH B 40 540 29 HOH HOH . 
AA 8 HOH B 41 541 30 HOH HOH . 
AA 8 HOH B 42 542 82 HOH HOH . 
AA 8 HOH B 43 543 58 HOH HOH . 
AA 8 HOH B 44 544 75 HOH HOH . 
AA 8 HOH B 45 545 37 HOH HOH . 
AA 8 HOH B 46 546 51 HOH HOH . 
AA 8 HOH B 47 547 73 HOH HOH . 
AA 8 HOH B 48 548 25 HOH HOH . 
AA 8 HOH B 49 549 83 HOH HOH . 
AA 8 HOH B 50 550 72 HOH HOH . 
AA 8 HOH B 51 551 45 HOH HOH . 
AA 8 HOH B 52 552 59 HOH HOH . 
AA 8 HOH B 53 553 8 HOH HOH . 
AA 8 HOH B 54 554 56 HOH HOH . 
AA 8 HOH B 55 555 50 HOH HOH . 
AA 8 HOH B 56 556 28 HOH HOH . 
AA 8 HOH B 57 557 89 HOH HOH . 
AA 8 HOH B 58 558 85 HOH HOH . 
AA 8 HOH B 59 559 88 HOH HOH . 
AA 8 HOH B 60 560 61 HOH HOH . 
AA 8 HOH B 61 561 35 HOH HOH . 
AA 8 HOH B 62 562 39 HOH HOH . 
AA 8 HOH B 63 563 38 HOH HOH . 
AA 8 HOH B 64 564 69 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CL 
_atom_site.label_atom_id         CL 
_atom_site.label_comp_id         CL 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         V 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               -47.79 
_atom_site.Cartn_y               14.518 
_atom_site.Cartn_z               15.431 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        80.14 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CL 
_atom_site.auth_comp_id          CL 
_atom_site.auth_seq_id           414 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#