data_6DYX # _model_server_result.job_id 5RcKzmptFVtHpQ9pkA7sIA _model_server_result.datetime_utc '2025-04-12 18:16:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dyx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6DYX # _exptl.entry_id 6DYX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6DYX _cell.length_a 58.281 _cell.length_b 58.281 _cell.length_c 155.358 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DYX _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 22 _struct_conn.ptnr1_auth_asym_id D _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 22 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 96 _struct_conn.ptnr2_auth_asym_id D _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 96 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.031 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 6DYX _atom_sites.fract_transf_matrix[1][1] 0.017158 _atom_sites.fract_transf_matrix[1][2] 0.009906 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019813 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 D 1 201 201 SO4 SO4 . C 3 ACT D 1 202 401 ACT ACT . D 2 SO4 D 1 203 501 SO4 SO4 . E 4 HOH D 1 301 121 HOH HOH . E 4 HOH D 2 302 111 HOH HOH . E 4 HOH D 3 303 119 HOH HOH . E 4 HOH D 4 304 106 HOH HOH . E 4 HOH D 5 305 42 HOH HOH . E 4 HOH D 6 306 117 HOH HOH . E 4 HOH D 7 307 61 HOH HOH . E 4 HOH D 8 308 120 HOH HOH . E 4 HOH D 9 309 18 HOH HOH . E 4 HOH D 10 310 17 HOH HOH . E 4 HOH D 11 311 86 HOH HOH . E 4 HOH D 12 312 34 HOH HOH . E 4 HOH D 13 313 64 HOH HOH . E 4 HOH D 14 314 60 HOH HOH . E 4 HOH D 15 315 128 HOH HOH . E 4 HOH D 16 316 26 HOH HOH . E 4 HOH D 17 317 16 HOH HOH . E 4 HOH D 18 318 76 HOH HOH . E 4 HOH D 19 319 13 HOH HOH . E 4 HOH D 20 320 50 HOH HOH . E 4 HOH D 21 321 91 HOH HOH . E 4 HOH D 22 322 44 HOH HOH . E 4 HOH D 23 323 5 HOH HOH . E 4 HOH D 24 324 3 HOH HOH . E 4 HOH D 25 325 54 HOH HOH . E 4 HOH D 26 326 147 HOH HOH . E 4 HOH D 27 327 11 HOH HOH . E 4 HOH D 28 328 38 HOH HOH . E 4 HOH D 29 329 31 HOH HOH . E 4 HOH D 30 330 25 HOH HOH . E 4 HOH D 31 331 118 HOH HOH . E 4 HOH D 32 332 59 HOH HOH . E 4 HOH D 33 333 143 HOH HOH . E 4 HOH D 34 334 23 HOH HOH . E 4 HOH D 35 335 24 HOH HOH . E 4 HOH D 36 336 72 HOH HOH . E 4 HOH D 37 337 66 HOH HOH . E 4 HOH D 38 338 45 HOH HOH . E 4 HOH D 39 339 89 HOH HOH . E 4 HOH D 40 340 27 HOH HOH . E 4 HOH D 41 341 37 HOH HOH . E 4 HOH D 42 342 62 HOH HOH . E 4 HOH D 43 343 55 HOH HOH . E 4 HOH D 44 344 82 HOH HOH . E 4 HOH D 45 345 15 HOH HOH . E 4 HOH D 46 346 131 HOH HOH . E 4 HOH D 47 347 81 HOH HOH . E 4 HOH D 48 348 8 HOH HOH . E 4 HOH D 49 349 29 HOH HOH . E 4 HOH D 50 350 1 HOH HOH . E 4 HOH D 51 351 12 HOH HOH . E 4 HOH D 52 352 2 HOH HOH . E 4 HOH D 53 353 133 HOH HOH . E 4 HOH D 54 354 78 HOH HOH . E 4 HOH D 55 355 73 HOH HOH . E 4 HOH D 56 356 79 HOH HOH . E 4 HOH D 57 357 87 HOH HOH . E 4 HOH D 58 358 10 HOH HOH . E 4 HOH D 59 359 48 HOH HOH . E 4 HOH D 60 360 149 HOH HOH . E 4 HOH D 61 361 144 HOH HOH . E 4 HOH D 62 362 90 HOH HOH . E 4 HOH D 63 363 112 HOH HOH . E 4 HOH D 64 364 100 HOH HOH . E 4 HOH D 65 365 7 HOH HOH . E 4 HOH D 66 366 101 HOH HOH . E 4 HOH D 67 367 9 HOH HOH . E 4 HOH D 68 368 99 HOH HOH . E 4 HOH D 69 369 35 HOH HOH . E 4 HOH D 70 370 39 HOH HOH . E 4 HOH D 71 371 57 HOH HOH . E 4 HOH D 72 372 88 HOH HOH . E 4 HOH D 73 373 85 HOH HOH . E 4 HOH D 74 374 96 HOH HOH . E 4 HOH D 75 375 21 HOH HOH . E 4 HOH D 76 376 97 HOH HOH . E 4 HOH D 77 377 20 HOH HOH . E 4 HOH D 78 378 19 HOH HOH . E 4 HOH D 79 379 65 HOH HOH . E 4 HOH D 80 380 4 HOH HOH . E 4 HOH D 81 381 83 HOH HOH . E 4 HOH D 82 382 56 HOH HOH . E 4 HOH D 83 383 95 HOH HOH . E 4 HOH D 84 384 67 HOH HOH . E 4 HOH D 85 385 51 HOH HOH . E 4 HOH D 86 386 32 HOH HOH . E 4 HOH D 87 387 84 HOH HOH . E 4 HOH D 88 388 80 HOH HOH . E 4 HOH D 89 389 52 HOH HOH . E 4 HOH D 90 390 30 HOH HOH . E 4 HOH D 91 391 14 HOH HOH . E 4 HOH D 92 392 132 HOH HOH . E 4 HOH D 93 393 98 HOH HOH . E 4 HOH D 94 394 102 HOH HOH . E 4 HOH D 95 395 33 HOH HOH . E 4 HOH D 96 396 142 HOH HOH . E 4 HOH D 97 397 6 HOH HOH . E 4 HOH D 98 398 108 HOH HOH . E 4 HOH D 99 399 103 HOH HOH . E 4 HOH D 100 400 123 HOH HOH . E 4 HOH D 101 401 146 HOH HOH . E 4 HOH D 102 402 75 HOH HOH . E 4 HOH D 103 403 93 HOH HOH . E 4 HOH D 104 404 116 HOH HOH . E 4 HOH D 105 405 68 HOH HOH . E 4 HOH D 106 406 43 HOH HOH . E 4 HOH D 107 407 47 HOH HOH . E 4 HOH D 108 408 53 HOH HOH . E 4 HOH D 109 409 70 HOH HOH . E 4 HOH D 110 410 141 HOH HOH . E 4 HOH D 111 411 110 HOH HOH . E 4 HOH D 112 412 63 HOH HOH . E 4 HOH D 113 413 71 HOH HOH . E 4 HOH D 114 414 140 HOH HOH . E 4 HOH D 115 415 115 HOH HOH . E 4 HOH D 116 416 122 HOH HOH . E 4 HOH D 117 417 109 HOH HOH . E 4 HOH D 118 418 129 HOH HOH . E 4 HOH D 119 419 74 HOH HOH . E 4 HOH D 120 420 36 HOH HOH . E 4 HOH D 121 421 22 HOH HOH . E 4 HOH D 122 422 58 HOH HOH . E 4 HOH D 123 423 150 HOH HOH . E 4 HOH D 124 424 114 HOH HOH . E 4 HOH D 125 425 69 HOH HOH . E 4 HOH D 126 426 151 HOH HOH . E 4 HOH D 127 427 40 HOH HOH . E 4 HOH D 128 428 105 HOH HOH . E 4 HOH D 129 429 113 HOH HOH . E 4 HOH D 130 430 92 HOH HOH . E 4 HOH D 131 431 124 HOH HOH . E 4 HOH D 132 432 130 HOH HOH . E 4 HOH D 133 433 77 HOH HOH . E 4 HOH D 134 434 148 HOH HOH . E 4 HOH D 135 435 94 HOH HOH . E 4 HOH D 136 436 49 HOH HOH . E 4 HOH D 137 437 137 HOH HOH . E 4 HOH D 138 438 46 HOH HOH . E 4 HOH D 139 439 107 HOH HOH . E 4 HOH D 140 440 41 HOH HOH . E 4 HOH D 141 441 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . C 3 16.888 -18.201 -13.131 1 41.71 ? C ACT 202 D 1 HETATM 2 O O ACT . . . C 3 17.517 -17.446 -13.916 1 44.88 ? O ACT 202 D 1 HETATM 3 O OXT ACT . . . C 3 15.748 -18.033 -12.628 1 41.88 ? OXT ACT 202 D 1 HETATM 4 C CH3 ACT . . . C 3 17.589 -19.524 -12.718 1 38.69 ? CH3 ACT 202 D 1 HETATM 5 H H1 ACT . . . C 3 18.008 -19.411 -11.85 1 46.49 ? H1 ACT 202 D 1 HETATM 6 H H2 ACT . . . C 3 18.265 -19.75 -13.376 1 46.49 ? H2 ACT 202 D 1 HETATM 7 H H3 ACT . . . C 3 16.933 -20.237 -12.67 1 46.49 ? H3 ACT 202 D 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #