data_6DZH # _model_server_result.job_id Al8-Mvt3PU6GoAgCoybsJw _model_server_result.datetime_utc '2024-11-22 23:00:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dzh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 6DZH # _exptl.entry_id 6DZH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6DZH _cell.length_a 60.571 _cell.length_b 71.41 _cell.length_c 94.861 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DZH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,O 1 1 B,G,H,I,J,K,P 2 1 C,L,M,N,Q 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 G N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 E MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc2 D O3B GDP . A GDP 201 1_555 E MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc3 E MG MG . A MG 202 1_555 O O HOH . A HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc4 E MG MG . A MG 202 1_555 O O HOH . A HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc5 E MG MG . A MG 202 1_555 O O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc6 E MG MG . A MG 202 1_555 O O HOH . A HOH 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc7 O O HOH . A HOH 309 1_555 J CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc8 O O HOH . A HOH 339 1_555 J CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc9 B OD1 ASP 13 B ASP 13 1_555 J CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc10 B OG SER 17 B SER 17 1_555 I MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc11 B OD1 ASP 33 B ASP 33 1_555 I MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc12 B OD2 ASP 33 B ASP 33 1_555 I MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc13 B OD2 ASP 33 B ASP 33 1_555 J CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc14 B O GLY 138 B GLY 138 1_555 H MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc15 G O3B GDP . B GDP 201 1_555 I MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc16 G O1B GDP . B GDP 201 1_555 J CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc17 G O1A GDP . B GDP 201 1_555 J CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc18 H MG MG . B MG 202 1_555 P O HOH . B HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc19 H MG MG . B MG 202 1_555 P O HOH . B HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc20 H MG MG . B MG 202 1_555 P O HOH . B HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc21 H MG MG . B MG 202 1_555 P O HOH . B HOH 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc22 H MG MG . B MG 202 1_555 P O HOH . B HOH 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc23 I MG MG . B MG 203 1_555 P O HOH . B HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc24 I MG MG . B MG 203 1_555 P O HOH . B HOH 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc25 I MG MG . B MG 203 1_555 P O HOH . B HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc26 C O GLU 3 C GLU 3 1_555 N CA CA . C CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc27 C OG SER 17 C SER 17 1_555 M MG MG . C MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc28 C OE1 GLU 76 C GLU 76 1_555 N CA CA . C CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.826 ? metalc ? metalc29 C OE2 GLU 76 C GLU 76 1_555 N CA CA . C CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc30 L O1B GDP . C GDP 201 1_555 M MG MG . C MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc31 M MG MG . C MG 202 1_555 Q O HOH . C HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.782 ? metalc ? metalc32 M MG MG . C MG 202 1_555 Q O HOH . C HOH 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc33 M MG MG . C MG 202 1_555 Q O HOH . C HOH 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc34 N CA CA . C CA 203 1_555 Q O HOH . C HOH 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc35 N CA CA . C CA 203 1_555 Q O HOH . C HOH 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 100 n n PB O2B GDP sing 101 n n PB O3B GDP sing 102 n n PB O3A GDP sing 103 n n O2B HOB2 GDP sing 104 n n O3B HOB3 GDP sing 105 n n O3A PA GDP sing 106 n n PA O1A GDP doub 107 n n PA O2A GDP sing 108 n n PA O5' GDP sing 109 n n O2A HOA2 GDP sing 110 n n O5' C5' GDP sing 111 n n C5' C4' GDP sing 112 n n C5' H5' GDP sing 113 n n C5' "H5''" GDP sing 114 n n C4' O4' GDP sing 115 n n C4' C3' GDP sing 116 n n C4' H4' GDP sing 117 n n O4' C1' GDP sing 118 n n C3' O3' GDP sing 119 n n C3' C2' GDP sing 120 n n C3' H3' GDP sing 121 n n O3' HO3' GDP sing 122 n n C2' O2' GDP sing 123 n n C2' C1' GDP sing 124 n n C2' H2' GDP sing 125 n n O2' HO2' GDP sing 126 n n C1' N9 GDP sing 127 n n C1' H1' GDP sing 128 n n N9 C8 GDP sing 129 n y N9 C4 GDP sing 130 n y C8 N7 GDP doub 131 n y C8 H8 GDP sing 132 n n N7 C5 GDP sing 133 n y C5 C6 GDP sing 134 n n C5 C4 GDP doub 135 n y C6 O6 GDP doub 136 n n C6 N1 GDP sing 137 n n N1 C2 GDP sing 138 n n N1 HN1 GDP sing 139 n n C2 N2 GDP sing 140 n n C2 N3 GDP doub 141 n n N2 HN21 GDP sing 142 n n N2 HN22 GDP sing 143 n n N3 C4 GDP sing 144 n n # _atom_sites.entry_id 6DZH _atom_sites.fract_transf_matrix[1][1] 0.01651 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014004 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010542 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GDP A 1 201 201 GDP GDP . E 3 MG A 1 202 202 MG MG . F 4 GOL A 1 203 3968 GOL GOL . G 2 GDP B 1 201 202 GDP GDP . H 3 MG B 1 202 203 MG MG . I 3 MG B 1 203 204 MG MG . J 5 CA B 1 204 205 CA CA . K 6 DTT B 1 205 3236 DTT DTT . L 2 GDP C 1 201 203 GDP GDP . M 3 MG C 1 202 204 MG MG . N 5 CA C 1 203 205 CA CA . O 7 HOH A 1 301 247 HOH HOH . O 7 HOH A 2 302 174 HOH HOH . O 7 HOH A 3 303 192 HOH HOH . O 7 HOH A 4 304 250 HOH HOH . O 7 HOH A 5 305 172 HOH HOH . O 7 HOH A 6 306 262 HOH HOH . O 7 HOH A 7 307 195 HOH HOH . O 7 HOH A 8 308 151 HOH HOH . O 7 HOH A 9 309 47 HOH HOH . O 7 HOH A 10 310 243 HOH HOH . O 7 HOH A 11 311 251 HOH HOH . O 7 HOH A 12 312 124 HOH HOH . O 7 HOH A 13 313 23 HOH HOH . O 7 HOH A 14 314 126 HOH HOH . O 7 HOH A 15 315 122 HOH HOH . O 7 HOH A 16 316 205 HOH HOH . O 7 HOH A 17 317 273 HOH HOH . O 7 HOH A 18 318 110 HOH HOH . O 7 HOH A 19 319 133 HOH HOH . O 7 HOH A 20 320 257 HOH HOH . O 7 HOH A 21 321 1 HOH HOH . O 7 HOH A 22 322 156 HOH HOH . O 7 HOH A 23 323 13 HOH HOH . O 7 HOH A 24 324 178 HOH HOH . O 7 HOH A 25 325 2 HOH HOH . O 7 HOH A 26 326 12 HOH HOH . O 7 HOH A 27 327 80 HOH HOH . O 7 HOH A 28 328 72 HOH HOH . O 7 HOH A 29 329 15 HOH HOH . O 7 HOH A 30 330 238 HOH HOH . O 7 HOH A 31 331 42 HOH HOH . O 7 HOH A 32 332 150 HOH HOH . O 7 HOH A 33 333 244 HOH HOH . O 7 HOH A 34 334 242 HOH HOH . O 7 HOH A 35 335 27 HOH HOH . O 7 HOH A 36 336 22 HOH HOH . O 7 HOH A 37 337 29 HOH HOH . O 7 HOH A 38 338 152 HOH HOH . O 7 HOH A 39 339 48 HOH HOH . O 7 HOH A 40 340 63 HOH HOH . O 7 HOH A 41 341 183 HOH HOH . O 7 HOH A 42 342 78 HOH HOH . O 7 HOH A 43 343 21 HOH HOH . O 7 HOH A 44 344 194 HOH HOH . O 7 HOH A 45 345 227 HOH HOH . O 7 HOH A 46 346 157 HOH HOH . O 7 HOH A 47 347 7 HOH HOH . O 7 HOH A 48 348 131 HOH HOH . O 7 HOH A 49 349 3 HOH HOH . O 7 HOH A 50 350 109 HOH HOH . O 7 HOH A 51 351 123 HOH HOH . O 7 HOH A 52 352 200 HOH HOH . O 7 HOH A 53 353 225 HOH HOH . O 7 HOH A 54 354 182 HOH HOH . O 7 HOH A 55 355 76 HOH HOH . O 7 HOH A 56 356 130 HOH HOH . O 7 HOH A 57 357 187 HOH HOH . O 7 HOH A 58 358 77 HOH HOH . O 7 HOH A 59 359 95 HOH HOH . O 7 HOH A 60 360 61 HOH HOH . O 7 HOH A 61 361 81 HOH HOH . O 7 HOH A 62 362 17 HOH HOH . O 7 HOH A 63 363 99 HOH HOH . O 7 HOH A 64 364 154 HOH HOH . O 7 HOH A 65 365 60 HOH HOH . O 7 HOH A 66 366 239 HOH HOH . O 7 HOH A 67 367 197 HOH HOH . O 7 HOH A 68 368 159 HOH HOH . O 7 HOH A 69 369 226 HOH HOH . O 7 HOH A 70 370 236 HOH HOH . O 7 HOH A 71 371 208 HOH HOH . O 7 HOH A 72 372 140 HOH HOH . O 7 HOH A 73 373 79 HOH HOH . O 7 HOH A 74 374 255 HOH HOH . O 7 HOH A 75 375 160 HOH HOH . O 7 HOH A 76 376 265 HOH HOH . O 7 HOH A 77 377 206 HOH HOH . O 7 HOH A 78 378 20 HOH HOH . O 7 HOH A 79 379 26 HOH HOH . O 7 HOH A 80 380 267 HOH HOH . O 7 HOH A 81 381 196 HOH HOH . O 7 HOH A 82 382 129 HOH HOH . O 7 HOH A 83 383 261 HOH HOH . O 7 HOH A 84 384 184 HOH HOH . O 7 HOH A 85 385 177 HOH HOH . O 7 HOH A 86 386 149 HOH HOH . P 7 HOH B 1 301 249 HOH HOH . P 7 HOH B 2 302 269 HOH HOH . P 7 HOH B 3 303 216 HOH HOH . P 7 HOH B 4 304 204 HOH HOH . P 7 HOH B 5 305 275 HOH HOH . P 7 HOH B 6 306 270 HOH HOH . P 7 HOH B 7 307 142 HOH HOH . P 7 HOH B 8 308 163 HOH HOH . P 7 HOH B 9 309 4 HOH HOH . P 7 HOH B 10 310 246 HOH HOH . P 7 HOH B 11 311 191 HOH HOH . P 7 HOH B 12 312 37 HOH HOH . P 7 HOH B 13 313 256 HOH HOH . P 7 HOH B 14 314 254 HOH HOH . P 7 HOH B 15 315 50 HOH HOH . P 7 HOH B 16 316 271 HOH HOH . P 7 HOH B 17 317 245 HOH HOH . P 7 HOH B 18 318 51 HOH HOH . P 7 HOH B 19 319 105 HOH HOH . P 7 HOH B 20 320 92 HOH HOH . P 7 HOH B 21 321 104 HOH HOH . P 7 HOH B 22 322 114 HOH HOH . P 7 HOH B 23 323 31 HOH HOH . P 7 HOH B 24 324 82 HOH HOH . P 7 HOH B 25 325 217 HOH HOH . P 7 HOH B 26 326 52 HOH HOH . P 7 HOH B 27 327 235 HOH HOH . P 7 HOH B 28 328 132 HOH HOH . P 7 HOH B 29 329 155 HOH HOH . P 7 HOH B 30 330 161 HOH HOH . P 7 HOH B 31 331 8 HOH HOH . P 7 HOH B 32 332 143 HOH HOH . P 7 HOH B 33 333 222 HOH HOH . P 7 HOH B 34 334 9 HOH HOH . P 7 HOH B 35 335 67 HOH HOH . P 7 HOH B 36 336 100 HOH HOH . P 7 HOH B 37 337 16 HOH HOH . P 7 HOH B 38 338 56 HOH HOH . P 7 HOH B 39 339 10 HOH HOH . P 7 HOH B 40 340 171 HOH HOH . P 7 HOH B 41 341 68 HOH HOH . P 7 HOH B 42 342 117 HOH HOH . P 7 HOH B 43 343 145 HOH HOH . P 7 HOH B 44 344 248 HOH HOH . P 7 HOH B 45 345 33 HOH HOH . P 7 HOH B 46 346 241 HOH HOH . P 7 HOH B 47 347 64 HOH HOH . P 7 HOH B 48 348 88 HOH HOH . P 7 HOH B 49 349 101 HOH HOH . P 7 HOH B 50 350 103 HOH HOH . P 7 HOH B 51 351 253 HOH HOH . P 7 HOH B 52 352 111 HOH HOH . P 7 HOH B 53 353 264 HOH HOH . P 7 HOH B 54 354 35 HOH HOH . P 7 HOH B 55 355 5 HOH HOH . P 7 HOH B 56 356 186 HOH HOH . P 7 HOH B 57 357 70 HOH HOH . P 7 HOH B 58 358 69 HOH HOH . P 7 HOH B 59 359 49 HOH HOH . P 7 HOH B 60 360 223 HOH HOH . P 7 HOH B 61 361 229 HOH HOH . P 7 HOH B 62 362 201 HOH HOH . P 7 HOH B 63 363 180 HOH HOH . P 7 HOH B 64 364 116 HOH HOH . P 7 HOH B 65 365 34 HOH HOH . P 7 HOH B 66 366 107 HOH HOH . P 7 HOH B 67 367 162 HOH HOH . P 7 HOH B 68 368 259 HOH HOH . P 7 HOH B 69 369 252 HOH HOH . P 7 HOH B 70 370 230 HOH HOH . P 7 HOH B 71 371 228 HOH HOH . P 7 HOH B 72 372 102 HOH HOH . P 7 HOH B 73 373 128 HOH HOH . P 7 HOH B 74 374 276 HOH HOH . Q 7 HOH C 1 301 40 HOH HOH . Q 7 HOH C 2 302 83 HOH HOH . Q 7 HOH C 3 303 215 HOH HOH . Q 7 HOH C 4 304 268 HOH HOH . Q 7 HOH C 5 305 213 HOH HOH . Q 7 HOH C 6 306 65 HOH HOH . Q 7 HOH C 7 307 274 HOH HOH . Q 7 HOH C 8 308 135 HOH HOH . Q 7 HOH C 9 309 94 HOH HOH . Q 7 HOH C 10 310 58 HOH HOH . Q 7 HOH C 11 311 233 HOH HOH . Q 7 HOH C 12 312 43 HOH HOH . Q 7 HOH C 13 313 240 HOH HOH . Q 7 HOH C 14 314 138 HOH HOH . Q 7 HOH C 15 315 136 HOH HOH . Q 7 HOH C 16 316 168 HOH HOH . Q 7 HOH C 17 317 118 HOH HOH . Q 7 HOH C 18 318 119 HOH HOH . Q 7 HOH C 19 319 73 HOH HOH . Q 7 HOH C 20 320 146 HOH HOH . Q 7 HOH C 21 321 219 HOH HOH . Q 7 HOH C 22 322 55 HOH HOH . Q 7 HOH C 23 323 263 HOH HOH . Q 7 HOH C 24 324 266 HOH HOH . Q 7 HOH C 25 325 137 HOH HOH . Q 7 HOH C 26 326 181 HOH HOH . Q 7 HOH C 27 327 260 HOH HOH . Q 7 HOH C 28 328 14 HOH HOH . Q 7 HOH C 29 329 24 HOH HOH . Q 7 HOH C 30 330 46 HOH HOH . Q 7 HOH C 31 331 91 HOH HOH . Q 7 HOH C 32 332 54 HOH HOH . Q 7 HOH C 33 333 147 HOH HOH . Q 7 HOH C 34 334 89 HOH HOH . Q 7 HOH C 35 335 44 HOH HOH . Q 7 HOH C 36 336 121 HOH HOH . Q 7 HOH C 37 337 41 HOH HOH . Q 7 HOH C 38 338 173 HOH HOH . Q 7 HOH C 39 339 96 HOH HOH . Q 7 HOH C 40 340 202 HOH HOH . Q 7 HOH C 41 341 165 HOH HOH . Q 7 HOH C 42 342 45 HOH HOH . Q 7 HOH C 43 343 158 HOH HOH . Q 7 HOH C 44 344 85 HOH HOH . Q 7 HOH C 45 345 11 HOH HOH . Q 7 HOH C 46 346 166 HOH HOH . Q 7 HOH C 47 347 30 HOH HOH . Q 7 HOH C 48 348 93 HOH HOH . Q 7 HOH C 49 349 179 HOH HOH . Q 7 HOH C 50 350 221 HOH HOH . Q 7 HOH C 51 351 232 HOH HOH . Q 7 HOH C 52 352 19 HOH HOH . Q 7 HOH C 53 353 144 HOH HOH . Q 7 HOH C 54 354 188 HOH HOH . Q 7 HOH C 55 355 36 HOH HOH . Q 7 HOH C 56 356 209 HOH HOH . Q 7 HOH C 57 357 57 HOH HOH . Q 7 HOH C 58 358 74 HOH HOH . Q 7 HOH C 59 359 218 HOH HOH . Q 7 HOH C 60 360 59 HOH HOH . Q 7 HOH C 61 361 127 HOH HOH . Q 7 HOH C 62 362 234 HOH HOH . Q 7 HOH C 63 363 231 HOH HOH . Q 7 HOH C 64 364 39 HOH HOH . Q 7 HOH C 65 365 170 HOH HOH . Q 7 HOH C 66 366 169 HOH HOH . Q 7 HOH C 67 367 164 HOH HOH . Q 7 HOH C 68 368 106 HOH HOH . Q 7 HOH C 69 369 167 HOH HOH . Q 7 HOH C 70 370 108 HOH HOH . Q 7 HOH C 71 371 203 HOH HOH . Q 7 HOH C 72 372 75 HOH HOH . Q 7 HOH C 73 373 134 HOH HOH . Q 7 HOH C 74 374 84 HOH HOH . Q 7 HOH C 75 375 53 HOH HOH . Q 7 HOH C 76 376 272 HOH HOH . Q 7 HOH C 77 377 141 HOH HOH . Q 7 HOH C 78 378 220 HOH HOH . Q 7 HOH C 79 379 277 HOH HOH . Q 7 HOH C 80 380 189 HOH HOH . Q 7 HOH C 81 381 207 HOH HOH . Q 7 HOH C 82 382 153 HOH HOH . Q 7 HOH C 83 383 97 HOH HOH . Q 7 HOH C 84 384 193 HOH HOH . Q 7 HOH C 85 385 86 HOH HOH . Q 7 HOH C 86 386 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . D 2 8.801 -17.437 -11.45 1 16.45 ? PB GDP 201 A 1 HETATM 2 O O1B GDP . . . D 2 7.804 -18.262 -12.233 1 14.3 ? O1B GDP 201 A 1 HETATM 3 O O2B GDP . . . D 2 8.117 -16.211 -10.873 1 13.1 ? O2B GDP 201 A 1 HETATM 4 O O3B GDP . . . D 2 9.409 -18.278 -10.345 1 14.35 ? O3B GDP 201 A 1 HETATM 5 O O3A GDP . . . D 2 9.99 -16.93 -12.404 1 13.61 ? O3A GDP 201 A 1 HETATM 6 P PA GDP . . . D 2 11.377 -17.725 -12.648 1 16.4 ? PA GDP 201 A 1 HETATM 7 O O1A GDP . . . D 2 11.094 -19.205 -12.778 1 19.16 ? O1A GDP 201 A 1 HETATM 8 O O2A GDP . . . D 2 12.354 -17.408 -11.559 1 18.35 ? O2A GDP 201 A 1 HETATM 9 O O5' GDP . . . D 2 11.814 -17.066 -14.027 1 14.01 ? O5' GDP 201 A 1 HETATM 10 C C5' GDP . . . D 2 11.011 -17.236 -15.193 1 14.19 ? C5' GDP 201 A 1 HETATM 11 C C4' GDP . . . D 2 11.862 -16.902 -16.414 1 18.52 ? C4' GDP 201 A 1 HETATM 12 O O4' GDP . . . D 2 12.281 -15.529 -16.368 1 14.33 ? O4' GDP 201 A 1 HETATM 13 C C3' GDP . . . D 2 13.125 -17.751 -16.426 1 21.8 ? C3' GDP 201 A 1 HETATM 14 O O3' GDP . . . D 2 13.389 -18.15 -17.776 1 21.91 ? O3' GDP 201 A 1 HETATM 15 C C2' GDP . . . D 2 14.216 -16.813 -15.94 1 19.74 ? C2' GDP 201 A 1 HETATM 16 O O2' GDP . . . D 2 15.485 -17.098 -16.525 1 23.4 ? O2' GDP 201 A 1 HETATM 17 C C1' GDP . . . D 2 13.713 -15.466 -16.41 1 17.04 ? C1' GDP 201 A 1 HETATM 18 N N9 GDP . . . D 2 14.151 -14.419 -15.481 1 18.51 ? N9 GDP 201 A 1 HETATM 19 C C8 GDP . . . D 2 13.916 -14.366 -14.155 1 14.17 ? C8 GDP 201 A 1 HETATM 20 N N7 GDP . . . D 2 14.459 -13.243 -13.635 1 14.66 ? N7 GDP 201 A 1 HETATM 21 C C5 GDP . . . D 2 15.025 -12.56 -14.648 1 16.4 ? C5 GDP 201 A 1 HETATM 22 C C6 GDP . . . D 2 15.75 -11.288 -14.798 1 16.07 ? C6 GDP 201 A 1 HETATM 23 O O6 GDP . . . D 2 15.959 -10.588 -13.786 1 15.11 ? O6 GDP 201 A 1 HETATM 24 N N1 GDP . . . D 2 16.171 -10.937 -16.025 1 17.04 ? N1 GDP 201 A 1 HETATM 25 C C2 GDP . . . D 2 15.935 -11.703 -17.11 1 14.63 ? C2 GDP 201 A 1 HETATM 26 N N2 GDP . . . D 2 16.372 -11.307 -18.331 1 14.67 ? N2 GDP 201 A 1 HETATM 27 N N3 GDP . . . D 2 15.273 -12.877 -17.039 1 15.15 ? N3 GDP 201 A 1 HETATM 28 C C4 GDP . . . D 2 14.818 -13.341 -15.859 1 16.5 ? C4 GDP 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #