data_6E1M # _model_server_result.job_id weJVQD4JESCUP22zkh6QAQ _model_server_result.datetime_utc '2024-11-08 00:38:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6e1m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":806}' # _entry.id 6E1M # _exptl.entry_id 6E1M _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6E1M _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6E1M _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SEP 12 A SEP 22 1_555 A N GLU 13 A GLU 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C ILE 15 A ILE 25 1_555 A N TPO 16 A TPO 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C TPO 16 A TPO 26 1_555 A N HIS 17 A HIS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C GLY 18 A GLY 28 1_555 A N TPO 19 A TPO 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C TPO 19 A TPO 29 1_555 A N PRO 20 A PRO 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? covale ? covale6 A CE2 PHE 69 A PHE 79 1_555 O C36 3PH . A 3PH 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.497 ? covale ? covale7 A CG2 ILE 189 A ILE 199 1_555 O C34 3PH . A 3PH 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.5 ? covale ? covale8 A OE1 GLU 191 A GLU 201 1_555 O C23 3PH . A 3PH 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale9 A NE1 TRP 270 A TRP 280 1_555 M O1 PLM . A PLM 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.296 ? metalc ? metalc1 A OD1 ASP 325 A ASP 335 1_555 G CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc2 A OD1 ASN 329 A ASN 339 1_555 G CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc3 A O GLU 331 A GLU 341 1_555 G CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc4 A OE2 GLU 364 A GLU 374 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? covale ? covale10 A OG1 THR 640 A THR 650 1_555 N CA PLM . A PLM 812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale11 B C SEP 12 B SEP 22 1_555 B N GLU 13 B GLU 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale12 B C ILE 15 B ILE 25 1_555 B N TPO 16 B TPO 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 B C TPO 16 B TPO 26 1_555 B N HIS 17 B HIS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale14 B C GLY 18 B GLY 28 1_555 B N TPO 19 B TPO 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale15 B C TPO 19 B TPO 29 1_555 B N PRO 20 B PRO 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale16 B CZ PHE 69 B PHE 79 1_555 Y C35 3PH . B 3PH 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.497 ? covale ? covale17 B CG2 ILE 189 B ILE 199 1_555 Y C34 3PH . B 3PH 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.495 ? covale ? covale18 B OE1 GLU 191 B GLU 201 1_555 Y C23 3PH . B 3PH 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? metalc ? metalc5 B OD1 ASP 327 B ASP 337 1_555 Q CA CA . B CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.015 ? metalc ? metalc6 B OD2 ASP 327 B ASP 337 1_555 Q CA CA . B CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc7 B OD1 ASN 329 B ASN 339 1_555 Q CA CA . B CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? metalc ? metalc8 B O GLU 331 B GLU 341 1_555 Q CA CA . B CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc9 B OE1 GLU 364 B GLU 374 1_555 P CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.984 ? metalc ? metalc10 B OE2 GLU 364 B GLU 374 1_555 P CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? covale ? covale19 B OG1 THR 640 B THR 650 1_555 X CA PLM . B PLM 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.378 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6E1M _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 801 802 CA CA . D 2 CA A 1 802 803 CA CA . E 2 CA A 1 803 804 CA CA . F 2 CA A 1 804 805 CA CA . G 2 CA A 1 805 806 CA CA . H 3 PLM A 1 806 901 PLM PLM . I 3 PLM A 1 807 902 PLM PLM . J 3 PLM A 1 808 903 PLM PLM . K 3 PLM A 1 809 904 PLM PLM . L 3 PLM A 1 810 905 PLM PLM . M 3 PLM A 1 811 906 PLM PLM . N 3 PLM A 1 812 907 PLM PLM . O 4 3PH A 1 813 920 3PH 6PH . P 2 CA B 1 801 805 CA CA . Q 2 CA B 1 802 806 CA CA . R 3 PLM B 1 803 901 PLM PLM . S 3 PLM B 1 804 902 PLM PLM . T 3 PLM B 1 805 903 PLM PLM . U 3 PLM B 1 806 904 PLM PLM . V 3 PLM B 1 807 905 PLM PLM . W 3 PLM B 1 808 906 PLM PLM . X 3 PLM B 1 809 907 PLM PLM . Y 4 3PH B 1 810 920 3PH 6PH . Z 5 HOH A 1 901 1 HOH HOH . AA 5 HOH B 1 901 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . H 3 145.143 130.962 129.096 1 65.72 ? C1 PLM 806 A 1 HETATM 2 O O1 PLM . . . H 3 146.353 131.134 128.819 1 65.72 ? O1 PLM 806 A 1 HETATM 3 O O2 PLM . . . H 3 144.325 130.802 128.157 1 65.72 ? O2 PLM 806 A 1 HETATM 4 C C2 PLM . . . H 3 144.667 130.973 130.543 1 65.72 ? C2 PLM 806 A 1 HETATM 5 C C3 PLM . . . H 3 145.645 130.274 131.477 1 65.72 ? C3 PLM 806 A 1 HETATM 6 C C4 PLM . . . H 3 146.812 131.179 131.849 1 65.72 ? C4 PLM 806 A 1 HETATM 7 C C5 PLM . . . H 3 147.041 131.234 133.347 1 65.72 ? C5 PLM 806 A 1 HETATM 8 C C6 PLM . . . H 3 148.526 131.288 133.629 1 65.72 ? C6 PLM 806 A 1 HETATM 9 C C7 PLM . . . H 3 148.83 132.11 134.864 1 65.72 ? C7 PLM 806 A 1 HETATM 10 C C8 PLM . . . H 3 149.487 131.248 135.921 1 65.72 ? C8 PLM 806 A 1 HETATM 11 C C9 PLM . . . H 3 148.827 131.391 137.285 1 65.72 ? C9 PLM 806 A 1 HETATM 12 C CA PLM . . . H 3 149.643 132.341 138.144 1 65.72 ? CA PLM 806 A 1 HETATM 13 C CB PLM . . . H 3 150.961 132.64 137.456 1 65.72 ? CB PLM 806 A 1 HETATM 14 C CC PLM . . . H 3 152.144 132.568 138.406 1 65.72 ? CC PLM 806 A 1 HETATM 15 C CD PLM . . . H 3 151.76 132.613 139.881 1 65.72 ? CD PLM 806 A 1 HETATM 16 C CE PLM . . . H 3 152.968 132.63 140.816 1 65.72 ? CE PLM 806 A 1 HETATM 17 C CF PLM . . . H 3 153.619 131.26 140.972 1 65.72 ? CF PLM 806 A 1 HETATM 18 C CG PLM . . . H 3 155.146 131.295 140.982 1 65.72 ? CG PLM 806 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 23 _model_server_stats.element_count 18 #