data_6E1P # _model_server_result.job_id WpWp0RRhASJeOd1RMRslbQ _model_server_result.datetime_utc '2024-11-07 22:40:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6e1p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 6E1P # _exptl.entry_id 6E1P _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6E1P _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6E1P _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 M N N ? 2 Q N N ? 2 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SEP 12 A SEP 22 1_555 A N GLU 13 A GLU 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A O1P SEP 12 A SEP 22 1_555 A CG PRO 395 A PRO 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale3 A C ILE 15 A ILE 25 1_555 A N TPO 16 A TPO 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C TPO 16 A TPO 26 1_555 A N HIS 17 A HIS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale5 A C GLY 18 A GLY 28 1_555 A N TPO 19 A TPO 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A CB TPO 19 A TPO 29 1_555 A OG SER 50 A SER 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale7 A C TPO 19 A TPO 29 1_555 A N PRO 20 A PRO 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale8 A CG GLU 101 A GLU 111 1_555 K O2 PLM . A PLM 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? covale ? covale9 A NE1 TRP 270 A TRP 280 1_555 L O2 PLM . A PLM 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.294 ? metalc ? metalc1 A OD1 ASP 325 A ASP 335 1_555 D CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.924 ? metalc ? metalc2 A OD1 ASP 327 A ASP 337 1_555 D CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? metalc ? metalc3 A OD2 ASP 327 A ASP 337 1_555 D CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc4 A O GLU 331 A GLU 341 1_555 D CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc5 A O ARG 369 A ARG 379 1_555 C CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? covale ? covale10 B C SEP 12 B SEP 22 1_555 B N GLU 13 B GLU 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 B C ILE 15 B ILE 25 1_555 B N TPO 16 B TPO 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale12 B C TPO 16 B TPO 26 1_555 B N HIS 17 B HIS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale13 B C GLY 18 B GLY 28 1_555 B N TPO 19 B TPO 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 B CB TPO 19 B TPO 29 1_555 B OG SER 50 B SER 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale15 B C TPO 19 B TPO 29 1_555 B N PRO 20 B PRO 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale16 B CG GLU 101 B GLU 111 1_555 O O2 PLM . B PLM 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale17 B CD1 TRP 270 B TRP 280 1_555 P O2 PLM . B PLM 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.543 ? covale ? covale18 B NE1 TRP 270 B TRP 280 1_555 P O2 PLM . B PLM 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.298 ? metalc ? metalc6 B OD1 ASP 325 B ASP 335 1_555 R CA CA . B CA 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? metalc ? metalc7 B OD1 ASP 327 B ASP 337 1_555 R CA CA . B CA 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc8 B OD2 ASP 327 B ASP 337 1_555 R CA CA . B CA 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc9 B O GLU 331 B GLU 341 1_555 R CA CA . B CA 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc10 B O ARG 369 B ARG 379 1_555 Q CA CA . B CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc11 B OD1 ASP 596 B ASP 606 1_555 M CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.165 ? covale ? covale19 K CB PLM . A PLM 809 1_555 P C9 PLM . B PLM 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale20 K CB PLM . A PLM 809 1_555 P CA PLM . B PLM 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.491 ? covale ? covale21 K CC PLM . A PLM 809 1_555 P CA PLM . B PLM 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.571 ? covale ? covale22 L C2 PLM . A PLM 810 1_555 O C4 PLM . B PLM 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.397 ? covale ? covale23 L C3 PLM . A PLM 810 1_555 O C4 PLM . B PLM 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.493 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6E1P _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 801 805 CA CA . D 2 CA A 1 802 806 CA CA . E 3 PLM A 1 803 901 PLM PMA . F 3 PLM A 1 804 902 PLM PMA . G 3 PLM A 1 805 903 PLM PMA . H 3 PLM A 1 806 904 PLM PMA . I 3 PLM A 1 807 907 PLM PMA . J 3 PLM A 1 808 905 PLM PMA . K 3 PLM A 1 809 906 PLM PMA . L 3 PLM A 1 810 908 PLM PMA . M 2 CA B 1 801 804 CA CA . N 3 PLM B 1 802 905 PLM PMA . O 3 PLM B 1 803 906 PLM PMA . P 3 PLM B 1 804 908 PLM PMA . Q 2 CA B 1 805 805 CA CA . R 2 CA B 1 806 806 CA CA . S 3 PLM B 1 807 901 PLM PMA . T 3 PLM B 1 808 902 PLM PMA . U 3 PLM B 1 809 903 PLM PMA . V 3 PLM B 1 810 904 PLM PMA . W 3 PLM B 1 811 907 PLM PMA . X 4 HOH A 1 901 921 HOH HOH . Y 4 HOH B 1 901 921 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 133.567 _atom_site.Cartn_y 153.26 _atom_site.Cartn_z 197.076 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 270.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 801 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #