data_6E1T # _model_server_result.job_id wd11oesbbHgtToBKby-TUw _model_server_result.datetime_utc '2025-03-06 13:07:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6e1t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 6E1T # _exptl.entry_id 6E1T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 227.259 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6E1T _cell.length_a 115.054 _cell.length_b 115.054 _cell.length_c 58.792 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6E1T _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' U 12 A U 12 1_555 A P N 13 A N 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.614 ? covale ? covale2 A O3' N 13 A N 13 1_555 A P N 14 A N 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.609 ? covale ? covale3 A O3' N 14 A N 14 1_555 A P N 15 A N 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.608 ? covale ? covale4 A O3' N 15 A N 15 1_555 A P C 16 A C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.603 ? metalc ? metalc1 A OP2 G 5 A G 5 1_555 E MG MG . A MG 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc2 A OP2 C 7 A C 7 1_555 F MG MG . A MG 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc3 A OP2 A 10 A A 10 1_555 D MG MG . A MG 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc4 A OP2 A 28 A A 28 1_555 G MG MG . A MG 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc5 E MG MG . A MG 104 1_555 H O HOH . A HOH 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? hydrog WATSON-CRICK hydrog1 A N3 C 1 A C 1 1_555 A N1 G 20 A G 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 C 1 A C 1 1_555 A O6 G 20 A G 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 C 1 A C 1 1_555 A N2 G 20 A G 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 U 2 A U 2 1_555 A N1 A 19 A A 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O4 U 2 A U 2 1_555 A N6 A 19 A A 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N1 G 3 A G 3 1_555 A N3 C 18 A C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N2 G 3 A G 3 1_555 A O2 C 18 A C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O6 G 3 A G 3 1_555 A N4 C 18 A C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 G 4 A G 4 1_555 A N3 C 17 A C 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N2 G 4 A G 4 1_555 A O2 C 17 A C 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O6 G 4 A G 4 1_555 A N4 C 17 A C 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 G 5 A G 5 1_555 A N3 C 16 A C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N2 G 5 A G 5 1_555 A O2 C 16 A C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O6 G 5 A G 5 1_555 A N4 C 16 A C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_10_PAIR hydrog15 A N2 G 5 A G 5 1_555 A N1 A 27 A A 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_10_PAIR hydrog16 A N3 G 5 A G 5 1_555 A N6 A 27 A A 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog17 A N3 U 6 A U 6 1_555 A N7 A 28 A A 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog18 A O4 U 6 A U 6 1_555 A N6 A 28 A A 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-G PAIR' hydrog19 A N4 C 7 A C 7 1_555 A N7 G 11 A G 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-A MISPAIR' hydrog20 A O2 C 7 A C 7 1_555 A N6 A 29 A A 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-C MISPAIR' hydrog21 A O2 C 7 A C 7 1_555 A N4 C 30 A C 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_10_PAIR hydrog22 A N2 G 8 A G 8 1_555 A N1 A 31 A A 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_10_PAIR hydrog23 A N3 G 8 A G 8 1_555 A N6 A 31 A A 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N3 C 9 A C 9 1_555 A N1 G 33 A G 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N4 C 9 A C 9 1_555 A O6 G 33 A G 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O2 C 9 A C 9 1_555 A N2 G 33 A G 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'A-A MISPAIR' hydrog27 A N3 A 10 A A 10 1_555 A N6 A 32 A A 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N1 G 11 A G 11 1_555 A N3 C 30 A C 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A N2 G 11 A G 11 1_555 A O2 C 30 A C 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A O6 G 11 A G 11 1_555 A N4 C 30 A C 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-A MISPAIR' hydrog31 A O2 C 16 A C 16 1_555 A N6 A 28 A A 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-A MISPAIR' hydrog32 A O2 C 17 A C 17 1_555 A N6 A 26 A A 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C14 H13 N O2' _chem_comp.formula_weight 227.259 _chem_comp.id HLV _chem_comp.mon_nstd_flag . _chem_comp.name 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C11 HLV doub 116 n y C12 C10 HLV sing 117 n y C11 C8 HLV sing 118 n y C10 C4 HLV doub 119 n y C8 C2 HLV doub 120 n y C4 C2 HLV sing 121 n y C4 O1 HLV sing 122 n y C2 C1 HLV sing 123 n y O1 C3 HLV sing 124 n y C1 C5 HLV doub 125 n y C1 C3 HLV sing 126 n y C5 C6 HLV sing 127 n y C3 C7 HLV doub 128 n y C13 C14 HLV sing 129 n n C13 O2 HLV sing 130 n n C7 C9 HLV sing 131 n y C6 C9 HLV doub 132 n y C6 O2 HLV sing 133 n n C14 N1 HLV sing 134 n n C5 H1 HLV sing 135 n n C10 H2 HLV sing 136 n n C11 H3 HLV sing 137 n n C12 H4 HLV sing 138 n n C13 H5 HLV sing 139 n n C13 H6 HLV sing 140 n n C14 H7 HLV sing 141 n n C14 H8 HLV sing 142 n n C7 H9 HLV sing 143 n n C8 H10 HLV sing 144 n n C9 H11 HLV sing 145 n n N1 H12 HLV sing 146 n n N1 H13 HLV sing 147 n n # _atom_sites.entry_id 6E1T _atom_sites.fract_transf_matrix[1][1] 0.008692 _atom_sites.fract_transf_matrix[1][2] 0.005018 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010036 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017009 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MES A 1 101 1 MES MES . C 3 HLV A 1 102 1 HLV CBI . D 4 MG A 1 103 1 MG MG . E 4 MG A 1 104 2 MG MG . F 4 MG A 1 105 3 MG MG . G 4 MG A 1 106 4 MG MG . H 5 HOH A 1 201 45 HOH HOH . H 5 HOH A 2 202 83 HOH HOH . H 5 HOH A 3 203 47 HOH HOH . H 5 HOH A 4 204 57 HOH HOH . H 5 HOH A 5 205 16 HOH HOH . H 5 HOH A 6 206 14 HOH HOH . H 5 HOH A 7 207 80 HOH HOH . H 5 HOH A 8 208 13 HOH HOH . H 5 HOH A 9 209 2 HOH HOH . H 5 HOH A 10 210 4 HOH HOH . H 5 HOH A 11 211 74 HOH HOH . H 5 HOH A 12 212 27 HOH HOH . H 5 HOH A 13 213 29 HOH HOH . H 5 HOH A 14 214 77 HOH HOH . H 5 HOH A 15 215 33 HOH HOH . H 5 HOH A 16 216 69 HOH HOH . H 5 HOH A 17 217 55 HOH HOH . H 5 HOH A 18 218 17 HOH HOH . H 5 HOH A 19 219 24 HOH HOH . H 5 HOH A 20 220 34 HOH HOH . H 5 HOH A 21 221 38 HOH HOH . H 5 HOH A 22 222 21 HOH HOH . H 5 HOH A 23 223 1 HOH HOH . H 5 HOH A 24 224 64 HOH HOH . H 5 HOH A 25 225 46 HOH HOH . H 5 HOH A 26 226 36 HOH HOH . H 5 HOH A 27 227 28 HOH HOH . H 5 HOH A 28 228 35 HOH HOH . H 5 HOH A 29 229 25 HOH HOH . H 5 HOH A 30 230 19 HOH HOH . H 5 HOH A 31 231 15 HOH HOH . H 5 HOH A 32 232 60 HOH HOH . H 5 HOH A 33 233 39 HOH HOH . H 5 HOH A 34 234 41 HOH HOH . H 5 HOH A 35 235 71 HOH HOH . H 5 HOH A 36 236 31 HOH HOH . H 5 HOH A 37 237 3 HOH HOH . H 5 HOH A 38 238 53 HOH HOH . H 5 HOH A 39 239 32 HOH HOH . H 5 HOH A 40 240 10 HOH HOH . H 5 HOH A 41 241 5 HOH HOH . H 5 HOH A 42 242 43 HOH HOH . H 5 HOH A 43 243 59 HOH HOH . H 5 HOH A 44 244 23 HOH HOH . H 5 HOH A 45 245 49 HOH HOH . H 5 HOH A 46 246 67 HOH HOH . H 5 HOH A 47 247 26 HOH HOH . H 5 HOH A 48 248 70 HOH HOH . H 5 HOH A 49 249 20 HOH HOH . H 5 HOH A 50 250 7 HOH HOH . H 5 HOH A 51 251 50 HOH HOH . H 5 HOH A 52 252 65 HOH HOH . H 5 HOH A 53 253 63 HOH HOH . H 5 HOH A 54 254 44 HOH HOH . H 5 HOH A 55 255 18 HOH HOH . H 5 HOH A 56 256 9 HOH HOH . H 5 HOH A 57 257 75 HOH HOH . H 5 HOH A 58 258 6 HOH HOH . H 5 HOH A 59 259 61 HOH HOH . H 5 HOH A 60 260 54 HOH HOH . H 5 HOH A 61 261 40 HOH HOH . H 5 HOH A 62 262 68 HOH HOH . H 5 HOH A 63 263 52 HOH HOH . H 5 HOH A 64 264 8 HOH HOH . H 5 HOH A 65 265 66 HOH HOH . H 5 HOH A 66 266 12 HOH HOH . H 5 HOH A 67 267 82 HOH HOH . H 5 HOH A 68 268 76 HOH HOH . H 5 HOH A 69 269 51 HOH HOH . H 5 HOH A 70 270 48 HOH HOH . H 5 HOH A 71 271 30 HOH HOH . H 5 HOH A 72 272 22 HOH HOH . H 5 HOH A 73 273 79 HOH HOH . H 5 HOH A 74 274 11 HOH HOH . H 5 HOH A 75 275 37 HOH HOH . H 5 HOH A 76 276 42 HOH HOH . H 5 HOH A 77 277 78 HOH HOH . H 5 HOH A 78 278 81 HOH HOH . H 5 HOH A 79 279 62 HOH HOH . H 5 HOH A 80 280 58 HOH HOH . H 5 HOH A 81 281 72 HOH HOH . H 5 HOH A 82 282 56 HOH HOH . H 5 HOH A 83 283 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HLV . . . C 3 38.153 36.814 23.247 1 22.95 ? C1 HLV 102 A 1 HETATM 2 C C2 HLV . . . C 3 37.527 36.968 22.066 1 27.24 ? C2 HLV 102 A 1 HETATM 3 C C3 HLV . . . C 3 37.644 35.733 23.832 1 24.1 ? C3 HLV 102 A 1 HETATM 4 C C4 HLV . . . C 3 36.615 35.995 21.928 1 26.6 ? C4 HLV 102 A 1 HETATM 5 C C5 HLV . . . C 3 39.138 37.503 23.847 1 29.6 ? C5 HLV 102 A 1 HETATM 6 C C6 HLV . . . C 3 39.618 37.098 25.096 1 30.86 ? C6 HLV 102 A 1 HETATM 7 O O2 HLV . . . C 3 40.618 37.758 25.764 1 37.21 ? O2 HLV 102 A 1 HETATM 8 C C10 HLV . . . C 3 35.835 35.9 20.844 1 27.48 ? C10 HLV 102 A 1 HETATM 9 C C11 HLV . . . C 3 36.883 37.851 19.954 1 29.45 ? C11 HLV 102 A 1 HETATM 10 C C12 HLV . . . C 3 35.941 36.836 19.825 1 23.99 ? C12 HLV 102 A 1 HETATM 11 C C13 HLV . . . C 3 41.019 38.969 25.122 1 36.52 ? C13 HLV 102 A 1 HETATM 12 C C14 HLV . . . C 3 42.316 39.463 25.768 1 46.45 ? C14 HLV 102 A 1 HETATM 13 C C7 HLV . . . C 3 38.065 35.311 25.023 1 24.63 ? C7 HLV 102 A 1 HETATM 14 C C8 HLV . . . C 3 37.667 37.888 21.108 1 26.08 ? C8 HLV 102 A 1 HETATM 15 C C9 HLV . . . C 3 39.073 35.979 25.7 1 26.31 ? C9 HLV 102 A 1 HETATM 16 N N1 HLV . . . C 3 42.129 39.72 27.2 1 48.45 ? N1 HLV 102 A 1 HETATM 17 O O1 HLV . . . C 3 36.682 35.232 22.999 1 28.19 ? O1 HLV 102 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #