data_6E1U # _model_server_result.job_id 8Id0o0A1NicgNkEdFn_DrQ _model_server_result.datetime_utc '2025-03-06 12:51:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6e1u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 6E1U # _exptl.entry_id 6E1U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6E1U _cell.length_a 115.361 _cell.length_b 115.361 _cell.length_c 58.463 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6E1U _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' U 12 A U 12 1_555 A P N 13 A N 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.61 ? covale ? covale2 A O3' N 14 A N 14 1_555 A P C 15 A C 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.614 ? metalc ? metalc1 A OP2 G 3 A G 3 1_555 C MG MG . A MG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? hydrog WATSON-CRICK hydrog1 A N3 C 1 A C 1 1_555 A N1 G 20 A G 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 C 1 A C 1 1_555 A O6 G 20 A G 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 C 1 A C 1 1_555 A N2 G 20 A G 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 U 2 A U 2 1_555 A N1 A 19 A A 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O4 U 2 A U 2 1_555 A N6 A 19 A A 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N1 G 3 A G 3 1_555 A N3 C 18 A C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N2 G 3 A G 3 1_555 A O2 C 18 A C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O6 G 3 A G 3 1_555 A N4 C 18 A C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 G 4 A G 4 1_555 A N3 C 17 A C 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N2 G 4 A G 4 1_555 A O2 C 17 A C 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O6 G 4 A G 4 1_555 A N4 C 17 A C 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 G 5 A G 5 1_555 A N3 C 16 A C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N2 G 5 A G 5 1_555 A O2 C 16 A C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O6 G 5 A G 5 1_555 A N4 C 16 A C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_10_PAIR hydrog15 A N2 G 5 A G 5 1_555 A N1 A 27 A A 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_10_PAIR hydrog16 A N3 G 5 A G 5 1_555 A N6 A 27 A A 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog17 A N3 U 6 A U 6 1_555 A N7 A 28 A A 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog18 A O4 U 6 A U 6 1_555 A N6 A 28 A A 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-G PAIR' hydrog19 A N4 C 7 A C 7 1_555 A N7 G 11 A G 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-A MISPAIR' hydrog20 A O2 C 7 A C 7 1_555 A N6 A 29 A A 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-C MISPAIR' hydrog21 A O2 C 7 A C 7 1_555 A N4 C 30 A C 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_10_PAIR hydrog22 A N2 G 8 A G 8 1_555 A N1 A 31 A A 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_10_PAIR hydrog23 A N3 G 8 A G 8 1_555 A N6 A 31 A A 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N3 C 9 A C 9 1_555 A N1 G 33 A G 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N4 C 9 A C 9 1_555 A O6 G 33 A G 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O2 C 9 A C 9 1_555 A N2 G 33 A G 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'A-A MISPAIR' hydrog27 A N3 A 10 A A 10 1_555 A N6 A 32 A A 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N1 G 11 A G 11 1_555 A N3 C 30 A C 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A N2 G 11 A G 11 1_555 A O2 C 30 A C 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A O6 G 11 A G 11 1_555 A N4 C 30 A C 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-A MISPAIR' hydrog31 A O2 C 16 A C 16 1_555 A N6 A 28 A A 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-A MISPAIR' hydrog32 A O2 C 17 A C 17 1_555 A N6 A 26 A A 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6E1U _atom_sites.fract_transf_matrix[1][1] 0.008668 _atom_sites.fract_transf_matrix[1][2] 0.005005 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010009 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HMJ A 1 101 1 HMJ LIG . C 3 MG A 1 102 1 MG MG . D 4 HOH A 1 201 50 HOH HOH . D 4 HOH A 2 202 2 HOH HOH . D 4 HOH A 3 203 12 HOH HOH . D 4 HOH A 4 204 1 HOH HOH . D 4 HOH A 5 205 36 HOH HOH . D 4 HOH A 6 206 3 HOH HOH . D 4 HOH A 7 207 7 HOH HOH . D 4 HOH A 8 208 46 HOH HOH . D 4 HOH A 9 209 13 HOH HOH . D 4 HOH A 10 210 35 HOH HOH . D 4 HOH A 11 211 41 HOH HOH . D 4 HOH A 12 212 17 HOH HOH . D 4 HOH A 13 213 18 HOH HOH . D 4 HOH A 14 214 38 HOH HOH . D 4 HOH A 15 215 6 HOH HOH . D 4 HOH A 16 216 42 HOH HOH . D 4 HOH A 17 217 20 HOH HOH . D 4 HOH A 18 218 4 HOH HOH . D 4 HOH A 19 219 15 HOH HOH . D 4 HOH A 20 220 40 HOH HOH . D 4 HOH A 21 221 22 HOH HOH . D 4 HOH A 22 222 21 HOH HOH . D 4 HOH A 23 223 8 HOH HOH . D 4 HOH A 24 224 10 HOH HOH . D 4 HOH A 25 225 31 HOH HOH . D 4 HOH A 26 226 45 HOH HOH . D 4 HOH A 27 227 14 HOH HOH . D 4 HOH A 28 228 34 HOH HOH . D 4 HOH A 29 229 27 HOH HOH . D 4 HOH A 30 230 9 HOH HOH . D 4 HOH A 31 231 44 HOH HOH . D 4 HOH A 32 232 30 HOH HOH . D 4 HOH A 33 233 33 HOH HOH . D 4 HOH A 34 234 5 HOH HOH . D 4 HOH A 35 235 23 HOH HOH . D 4 HOH A 36 236 11 HOH HOH . D 4 HOH A 37 237 29 HOH HOH . D 4 HOH A 38 238 28 HOH HOH . D 4 HOH A 39 239 16 HOH HOH . D 4 HOH A 40 240 48 HOH HOH . D 4 HOH A 41 241 24 HOH HOH . D 4 HOH A 42 242 19 HOH HOH . D 4 HOH A 43 243 26 HOH HOH . D 4 HOH A 44 244 39 HOH HOH . D 4 HOH A 45 245 43 HOH HOH . D 4 HOH A 46 246 32 HOH HOH . D 4 HOH A 47 247 25 HOH HOH . D 4 HOH A 48 248 37 HOH HOH . D 4 HOH A 49 249 49 HOH HOH . D 4 HOH A 50 250 47 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 40.693 _atom_site.Cartn_y 47.482 _atom_site.Cartn_z 28.111 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 73.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #