data_6E35
#
_model_server_result.job_id            x8f2qHgtEp53S8PssCS2kg 
_model_server_result.datetime_utc      '2024-11-01 15:28:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6e35 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    6E35 
#
_exptl.entry_id    6E35 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              26.017 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CYANIDE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6E35 
_cell.length_a            85.77 
_cell.length_b            90.302 
_cell.length_c            136.766 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6E35 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 298 A CYS 308 1_555 B SG CYS 298 B CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc1 A NE2 HIS 336 A HIS 346 1_555 C FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? 
metalc ? metalc2 C FE HEM . A HEM 501 1_555 D C CYN . A CYN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.791 sing 
metalc ? metalc3 B NE2 HIS 336 B HIS 346 1_555 G FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc4 G FE HEM . B HEM 501 1_555 H C CYN . B CYN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.813 sing 
#
_chem_comp.formula           'C N -1' 
_chem_comp.formula_weight    26.017 
_chem_comp.id                CYN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CYANIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_chem_comp_bond.atom_id_1             C 
_chem_comp_bond.atom_id_2             N 
_chem_comp_bond.comp_id               CYN 
_chem_comp_bond.value_order           trip 
_chem_comp_bond.pdbx_ordinal          70 
_chem_comp_bond.pdbx_stereo_config    n 
_chem_comp_bond.pdbx_aromatic_flag    n 
#
_atom_sites.entry_id                     6E35 
_atom_sites.fract_transf_matrix[1][1]    0.011659 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011074 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007312 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 501 501 HEM HEM . 
D 3 CYN A 1 502 502 CYN CYN . 
E 4 TRP A 1 503 503 TRP TRP . 
F 5 ZCW A 1 504 504 ZCW IDE . 
G 2 HEM B 1 501 501 HEM HEM . 
H 3 CYN B 1 502 502 CYN CYN . 
I 4 TRP B 1 503 503 TRP TRP . 
J 6 HOH A 1 601 144 HOH HOH . 
J 6 HOH A 2 602 83 HOH HOH . 
J 6 HOH A 3 603 8 HOH HOH . 
J 6 HOH A 4 604 108 HOH HOH . 
J 6 HOH A 5 605 50 HOH HOH . 
J 6 HOH A 6 606 44 HOH HOH . 
J 6 HOH A 7 607 188 HOH HOH . 
J 6 HOH A 8 608 4 HOH HOH . 
J 6 HOH A 9 609 33 HOH HOH . 
J 6 HOH A 10 610 35 HOH HOH . 
J 6 HOH A 11 611 61 HOH HOH . 
J 6 HOH A 12 612 67 HOH HOH . 
J 6 HOH A 13 613 74 HOH HOH . 
J 6 HOH A 14 614 3 HOH HOH . 
J 6 HOH A 15 615 23 HOH HOH . 
J 6 HOH A 16 616 91 HOH HOH . 
J 6 HOH A 17 617 45 HOH HOH . 
J 6 HOH A 18 618 203 HOH HOH . 
J 6 HOH A 19 619 54 HOH HOH . 
J 6 HOH A 20 620 53 HOH HOH . 
J 6 HOH A 21 621 105 HOH HOH . 
J 6 HOH A 22 622 197 HOH HOH . 
J 6 HOH A 23 623 212 HOH HOH . 
J 6 HOH A 24 624 26 HOH HOH . 
J 6 HOH A 25 625 232 HOH HOH . 
J 6 HOH A 26 626 13 HOH HOH . 
J 6 HOH A 27 627 213 HOH HOH . 
J 6 HOH A 28 628 98 HOH HOH . 
J 6 HOH A 29 629 217 HOH HOH . 
J 6 HOH A 30 630 68 HOH HOH . 
J 6 HOH A 31 631 47 HOH HOH . 
J 6 HOH A 32 632 71 HOH HOH . 
J 6 HOH A 33 633 19 HOH HOH . 
J 6 HOH A 34 634 214 HOH HOH . 
J 6 HOH A 35 635 146 HOH HOH . 
J 6 HOH A 36 636 48 HOH HOH . 
J 6 HOH A 37 637 38 HOH HOH . 
J 6 HOH A 38 638 102 HOH HOH . 
J 6 HOH A 39 639 219 HOH HOH . 
J 6 HOH A 40 640 154 HOH HOH . 
J 6 HOH A 41 641 59 HOH HOH . 
J 6 HOH A 42 642 216 HOH HOH . 
J 6 HOH A 43 643 37 HOH HOH . 
J 6 HOH A 44 644 189 HOH HOH . 
J 6 HOH A 45 645 25 HOH HOH . 
J 6 HOH A 46 646 138 HOH HOH . 
J 6 HOH A 47 647 107 HOH HOH . 
J 6 HOH A 48 648 85 HOH HOH . 
J 6 HOH A 49 649 69 HOH HOH . 
J 6 HOH A 50 650 31 HOH HOH . 
J 6 HOH A 51 651 51 HOH HOH . 
J 6 HOH A 52 652 210 HOH HOH . 
J 6 HOH A 53 653 122 HOH HOH . 
J 6 HOH A 54 654 28 HOH HOH . 
J 6 HOH A 55 655 104 HOH HOH . 
J 6 HOH A 56 656 87 HOH HOH . 
J 6 HOH A 57 657 201 HOH HOH . 
J 6 HOH A 58 658 20 HOH HOH . 
J 6 HOH A 59 659 86 HOH HOH . 
J 6 HOH A 60 660 140 HOH HOH . 
J 6 HOH A 61 661 192 HOH HOH . 
J 6 HOH A 62 662 112 HOH HOH . 
J 6 HOH A 63 663 42 HOH HOH . 
J 6 HOH A 64 664 194 HOH HOH . 
J 6 HOH A 65 665 7 HOH HOH . 
J 6 HOH A 66 666 152 HOH HOH . 
J 6 HOH A 67 667 199 HOH HOH . 
J 6 HOH A 68 668 215 HOH HOH . 
J 6 HOH A 69 669 205 HOH HOH . 
J 6 HOH A 70 670 149 HOH HOH . 
J 6 HOH A 71 671 15 HOH HOH . 
J 6 HOH A 72 672 190 HOH HOH . 
J 6 HOH A 73 673 233 HOH HOH . 
J 6 HOH A 74 674 204 HOH HOH . 
J 6 HOH A 75 675 79 HOH HOH . 
J 6 HOH A 76 676 208 HOH HOH . 
J 6 HOH A 77 677 209 HOH HOH . 
J 6 HOH A 78 678 113 HOH HOH . 
J 6 HOH A 79 679 151 HOH HOH . 
J 6 HOH A 80 680 116 HOH HOH . 
J 6 HOH A 81 681 137 HOH HOH . 
J 6 HOH A 82 682 139 HOH HOH . 
J 6 HOH A 83 683 211 HOH HOH . 
J 6 HOH A 84 684 218 HOH HOH . 
J 6 HOH A 85 685 172 HOH HOH . 
J 6 HOH A 86 686 88 HOH HOH . 
J 6 HOH A 87 687 141 HOH HOH . 
J 6 HOH A 88 688 145 HOH HOH . 
J 6 HOH A 89 689 75 HOH HOH . 
J 6 HOH A 90 690 147 HOH HOH . 
J 6 HOH A 91 691 150 HOH HOH . 
J 6 HOH A 92 692 177 HOH HOH . 
J 6 HOH A 93 693 173 HOH HOH . 
J 6 HOH A 94 694 119 HOH HOH . 
J 6 HOH A 95 695 143 HOH HOH . 
J 6 HOH A 96 696 66 HOH HOH . 
J 6 HOH A 97 697 202 HOH HOH . 
J 6 HOH A 98 698 128 HOH HOH . 
J 6 HOH A 99 699 142 HOH HOH . 
J 6 HOH A 100 700 195 HOH HOH . 
J 6 HOH A 101 701 200 HOH HOH . 
J 6 HOH A 102 702 114 HOH HOH . 
J 6 HOH A 103 703 206 HOH HOH . 
J 6 HOH A 104 704 148 HOH HOH . 
J 6 HOH A 105 705 207 HOH HOH . 
K 6 HOH B 1 601 169 HOH HOH . 
K 6 HOH B 2 602 21 HOH HOH . 
K 6 HOH B 3 603 179 HOH HOH . 
K 6 HOH B 4 604 56 HOH HOH . 
K 6 HOH B 5 605 198 HOH HOH . 
K 6 HOH B 6 606 10 HOH HOH . 
K 6 HOH B 7 607 121 HOH HOH . 
K 6 HOH B 8 608 27 HOH HOH . 
K 6 HOH B 9 609 132 HOH HOH . 
K 6 HOH B 10 610 134 HOH HOH . 
K 6 HOH B 11 611 49 HOH HOH . 
K 6 HOH B 12 612 18 HOH HOH . 
K 6 HOH B 13 613 46 HOH HOH . 
K 6 HOH B 14 614 96 HOH HOH . 
K 6 HOH B 15 615 178 HOH HOH . 
K 6 HOH B 16 616 9 HOH HOH . 
K 6 HOH B 17 617 32 HOH HOH . 
K 6 HOH B 18 618 39 HOH HOH . 
K 6 HOH B 19 619 123 HOH HOH . 
K 6 HOH B 20 620 109 HOH HOH . 
K 6 HOH B 21 621 97 HOH HOH . 
K 6 HOH B 22 622 41 HOH HOH . 
K 6 HOH B 23 623 2 HOH HOH . 
K 6 HOH B 24 624 62 HOH HOH . 
K 6 HOH B 25 625 60 HOH HOH . 
K 6 HOH B 26 626 168 HOH HOH . 
K 6 HOH B 27 627 131 HOH HOH . 
K 6 HOH B 28 628 24 HOH HOH . 
K 6 HOH B 29 629 129 HOH HOH . 
K 6 HOH B 30 630 6 HOH HOH . 
K 6 HOH B 31 631 14 HOH HOH . 
K 6 HOH B 32 632 57 HOH HOH . 
K 6 HOH B 33 633 191 HOH HOH . 
K 6 HOH B 34 634 94 HOH HOH . 
K 6 HOH B 35 635 224 HOH HOH . 
K 6 HOH B 36 636 40 HOH HOH . 
K 6 HOH B 37 637 34 HOH HOH . 
K 6 HOH B 38 638 99 HOH HOH . 
K 6 HOH B 39 639 93 HOH HOH . 
K 6 HOH B 40 640 65 HOH HOH . 
K 6 HOH B 41 641 72 HOH HOH . 
K 6 HOH B 42 642 70 HOH HOH . 
K 6 HOH B 43 643 220 HOH HOH . 
K 6 HOH B 44 644 77 HOH HOH . 
K 6 HOH B 45 645 64 HOH HOH . 
K 6 HOH B 46 646 174 HOH HOH . 
K 6 HOH B 47 647 95 HOH HOH . 
K 6 HOH B 48 648 29 HOH HOH . 
K 6 HOH B 49 649 1 HOH HOH . 
K 6 HOH B 50 650 101 HOH HOH . 
K 6 HOH B 51 651 81 HOH HOH . 
K 6 HOH B 52 652 73 HOH HOH . 
K 6 HOH B 53 653 193 HOH HOH . 
K 6 HOH B 54 654 124 HOH HOH . 
K 6 HOH B 55 655 221 HOH HOH . 
K 6 HOH B 56 656 43 HOH HOH . 
K 6 HOH B 57 657 158 HOH HOH . 
K 6 HOH B 58 658 90 HOH HOH . 
K 6 HOH B 59 659 36 HOH HOH . 
K 6 HOH B 60 660 30 HOH HOH . 
K 6 HOH B 61 661 11 HOH HOH . 
K 6 HOH B 62 662 80 HOH HOH . 
K 6 HOH B 63 663 17 HOH HOH . 
K 6 HOH B 64 664 92 HOH HOH . 
K 6 HOH B 65 665 55 HOH HOH . 
K 6 HOH B 66 666 89 HOH HOH . 
K 6 HOH B 67 667 12 HOH HOH . 
K 6 HOH B 68 668 120 HOH HOH . 
K 6 HOH B 69 669 181 HOH HOH . 
K 6 HOH B 70 670 167 HOH HOH . 
K 6 HOH B 71 671 5 HOH HOH . 
K 6 HOH B 72 672 163 HOH HOH . 
K 6 HOH B 73 673 106 HOH HOH . 
K 6 HOH B 74 674 175 HOH HOH . 
K 6 HOH B 75 675 229 HOH HOH . 
K 6 HOH B 76 676 52 HOH HOH . 
K 6 HOH B 77 677 84 HOH HOH . 
K 6 HOH B 78 678 176 HOH HOH . 
K 6 HOH B 79 679 170 HOH HOH . 
K 6 HOH B 80 680 100 HOH HOH . 
K 6 HOH B 81 681 162 HOH HOH . 
K 6 HOH B 82 682 159 HOH HOH . 
K 6 HOH B 83 683 187 HOH HOH . 
K 6 HOH B 84 684 156 HOH HOH . 
K 6 HOH B 85 685 186 HOH HOH . 
K 6 HOH B 86 686 76 HOH HOH . 
K 6 HOH B 87 687 118 HOH HOH . 
K 6 HOH B 88 688 227 HOH HOH . 
K 6 HOH B 89 689 153 HOH HOH . 
K 6 HOH B 90 690 22 HOH HOH . 
K 6 HOH B 91 691 180 HOH HOH . 
K 6 HOH B 92 692 16 HOH HOH . 
K 6 HOH B 93 693 111 HOH HOH . 
K 6 HOH B 94 694 63 HOH HOH . 
K 6 HOH B 95 695 82 HOH HOH . 
K 6 HOH B 96 696 196 HOH HOH . 
K 6 HOH B 97 697 222 HOH HOH . 
K 6 HOH B 98 698 185 HOH HOH . 
K 6 HOH B 99 699 228 HOH HOH . 
K 6 HOH B 100 700 225 HOH HOH . 
K 6 HOH B 101 701 160 HOH HOH . 
K 6 HOH B 102 702 135 HOH HOH . 
K 6 HOH B 103 703 115 HOH HOH . 
K 6 HOH B 104 704 130 HOH HOH . 
K 6 HOH B 105 705 231 HOH HOH . 
K 6 HOH B 106 706 58 HOH HOH . 
K 6 HOH B 107 707 165 HOH HOH . 
K 6 HOH B 108 708 103 HOH HOH . 
K 6 HOH B 109 709 78 HOH HOH . 
K 6 HOH B 110 710 117 HOH HOH . 
K 6 HOH B 111 711 226 HOH HOH . 
K 6 HOH B 112 712 230 HOH HOH . 
K 6 HOH B 113 713 171 HOH HOH . 
K 6 HOH B 114 714 157 HOH HOH . 
K 6 HOH B 115 715 136 HOH HOH . 
K 6 HOH B 116 716 110 HOH HOH . 
K 6 HOH B 117 717 164 HOH HOH . 
K 6 HOH B 118 718 223 HOH HOH . 
K 6 HOH B 119 719 182 HOH HOH . 
K 6 HOH B 120 720 183 HOH HOH . 
K 6 HOH B 121 721 126 HOH HOH . 
K 6 HOH B 122 722 155 HOH HOH . 
K 6 HOH B 123 723 166 HOH HOH . 
K 6 HOH B 124 724 125 HOH HOH . 
K 6 HOH B 125 725 161 HOH HOH . 
K 6 HOH B 126 726 133 HOH HOH . 
K 6 HOH B 127 727 127 HOH HOH . 
K 6 HOH B 128 728 184 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C CYN . . . D 3 -23.546 -6.535 -17.622 1 31.25 ? C CYN 502 A 1 
HETATM 2 N N CYN . . . D 3 -24.251 -5.908 -18.348 1 32.43 ? N CYN 502 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           2 
#