data_6E3P # _model_server_result.job_id yHDIaWBvBgz623PqjBiJxQ _model_server_result.datetime_utc '2024-11-15 01:05:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6e3p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":903}' # _entry.id 6E3P # _exptl.entry_id 6E3P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 299.242 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-hydroxy-4-oxo-6-[3-(1H-tetrazol-5-yl)phenyl]-1,4-dihydropyridine-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6E3P _cell.length_a 74.95 _cell.length_b 74.95 _cell.length_c 120.759 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6E3P _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 47 A HIS 41 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc2 A OE2 GLU 74 A GLU 80 1_555 C MN MN . A MN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc3 A OD2 ASP 102 A ASP 108 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc4 A OD1 ASP 102 A ASP 108 1_555 C MN MN . A MN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc5 A OE2 GLU 113 A GLU 119 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc6 A O ILE 114 A ILE 120 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc7 B MN MN . A MN 901 1_555 D OAD HO1 . A HO1 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc8 B MN MN . A MN 901 1_555 D OAB HO1 . A HO1 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc9 C MN MN . A MN 902 1_555 D OAC HO1 . A HO1 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.745 ? metalc ? metalc10 C MN MN . A MN 902 1_555 D OAD HO1 . A HO1 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? # _chem_comp.formula 'C13 H9 N5 O4' _chem_comp.formula_weight 299.242 _chem_comp.id HO1 _chem_comp.mon_nstd_flag . _chem_comp.name '3-hydroxy-4-oxo-6-[3-(1H-tetrazol-5-yl)phenyl]-1,4-dihydropyridine-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAB CAV HO1 doub 150 n n OAD CAS HO1 sing 151 n n CAV CAS HO1 sing 152 n n CAV CAI HO1 sing 153 n n CAS CAU HO1 doub 154 n n CAI CAR HO1 doub 155 n n OAC CAO HO1 doub 156 n n CAU CAO HO1 sing 157 n n CAU NAN HO1 sing 158 n n NAK NAM HO1 sing 159 n y NAK NAJ HO1 doub 160 n y NAM CAT HO1 sing 161 n y CAO OAA HO1 sing 162 n n CAR NAN HO1 sing 163 n n CAR CAP HO1 sing 164 n n CAH CAP HO1 doub 165 n y CAH CAQ HO1 sing 166 n y NAJ NAL HO1 sing 167 n y CAP CAF HO1 sing 168 n y CAT CAQ HO1 sing 169 n n CAT NAL HO1 doub 170 n y CAQ CAG HO1 doub 171 n y CAF CAE HO1 doub 172 n y CAG CAE HO1 sing 173 n y OAA H1 HO1 sing 174 n n NAN H2 HO1 sing 175 n n OAD H3 HO1 sing 176 n n CAI H4 HO1 sing 177 n n CAH H5 HO1 sing 178 n n CAF H6 HO1 sing 179 n n CAE H7 HO1 sing 180 n n CAG H8 HO1 sing 181 n n NAM H9 HO1 sing 182 n n # _atom_sites.entry_id 6E3P _atom_sites.fract_transf_matrix[1][1] 0.013342 _atom_sites.fract_transf_matrix[1][2] 0.007703 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 901 901 MN MN . C 2 MN A 1 902 902 MN MN . D 3 HO1 A 1 903 1 HO1 DRG . E 3 HO1 A 1 904 5 HO1 DRG . F 4 HOH A 1 1001 8 HOH HOH . F 4 HOH A 2 1002 1 HOH HOH . F 4 HOH A 3 1003 4 HOH HOH . F 4 HOH A 4 1004 6 HOH HOH . F 4 HOH A 5 1005 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAA HO1 . . . D 3 -17.974 16.03 137.428 1 45.43 ? OAA HO1 903 A 1 HETATM 2 C CAO HO1 . . . D 3 -18.125 16.241 136.199 1 48.54 ? CAO HO1 903 A 1 HETATM 3 O OAC HO1 . . . D 3 -17.402 15.615 135.389 1 54.06 ? OAC HO1 903 A 1 HETATM 4 C CAU HO1 . . . D 3 -19.156 17.069 135.727 1 47.71 ? CAU HO1 903 A 1 HETATM 5 N NAN HO1 . . . D 3 -19.88 17.822 136.672 1 46.9 ? NAN HO1 903 A 1 HETATM 6 C CAS HO1 . . . D 3 -19.519 17.15 134.354 1 46.94 ? CAS HO1 903 A 1 HETATM 7 O OAD HO1 . . . D 3 -18.839 16.418 133.393 1 40.21 ? OAD HO1 903 A 1 HETATM 8 C CAV HO1 . . . D 3 -20.592 17.957 133.947 1 45.96 ? CAV HO1 903 A 1 HETATM 9 O OAB HO1 . . . D 3 -20.962 18.061 132.771 1 41.12 ? OAB HO1 903 A 1 HETATM 10 C CAI HO1 . . . D 3 -21.276 18.688 134.91 1 47.87 ? CAI HO1 903 A 1 HETATM 11 C CAR HO1 . . . D 3 -20.947 18.648 136.274 1 51.11 ? CAR HO1 903 A 1 HETATM 12 C CAP HO1 . . . D 3 -21.683 19.419 137.201 1 61.04 ? CAP HO1 903 A 1 HETATM 13 C CAH HO1 . . . D 3 -22.853 20.075 136.78 1 67.99 ? CAH HO1 903 A 1 HETATM 14 C CAF HO1 . . . D 3 -21.31 19.58 138.545 1 64.88 ? CAF HO1 903 A 1 HETATM 15 C CAE HO1 . . . D 3 -22.099 20.367 139.398 1 66.34 ? CAE HO1 903 A 1 HETATM 16 C CAG HO1 . . . D 3 -23.262 21.007 138.951 1 67.06 ? CAG HO1 903 A 1 HETATM 17 C CAQ HO1 . . . D 3 -23.658 20.869 137.615 1 70.9 ? CAQ HO1 903 A 1 HETATM 18 C CAT HO1 . . . D 3 -24.781 21.448 137.088 1 74.79 ? CAT HO1 903 A 1 HETATM 19 N NAM HO1 . . . D 3 -25.193 21.358 135.807 1 74.35 ? NAM HO1 903 A 1 HETATM 20 N NAK HO1 . . . D 3 -26.262 22.002 135.662 1 70.41 ? NAK HO1 903 A 1 HETATM 21 N NAJ HO1 . . . D 3 -26.589 22.516 136.773 1 72.77 ? NAJ HO1 903 A 1 HETATM 22 N NAL HO1 . . . D 3 -25.691 22.191 137.713 1 75.88 ? NAL HO1 903 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 429 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 22 #