data_6E3P # _model_server_result.job_id e51xQNZN54vDA9cUEFf-WQ _model_server_result.datetime_utc '2024-11-15 01:12:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6e3p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":904}' # _entry.id 6E3P # _exptl.entry_id 6E3P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 299.242 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-hydroxy-4-oxo-6-[3-(1H-tetrazol-5-yl)phenyl]-1,4-dihydropyridine-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6E3P _cell.length_a 74.95 _cell.length_b 74.95 _cell.length_c 120.759 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6E3P _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 47 A HIS 41 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc2 A OE2 GLU 74 A GLU 80 1_555 C MN MN . A MN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc3 A OD2 ASP 102 A ASP 108 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc4 A OD1 ASP 102 A ASP 108 1_555 C MN MN . A MN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc5 A OE2 GLU 113 A GLU 119 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc6 A O ILE 114 A ILE 120 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc7 B MN MN . A MN 901 1_555 D OAD HO1 . A HO1 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc8 B MN MN . A MN 901 1_555 D OAB HO1 . A HO1 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc9 C MN MN . A MN 902 1_555 D OAC HO1 . A HO1 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.745 ? metalc ? metalc10 C MN MN . A MN 902 1_555 D OAD HO1 . A HO1 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? # _chem_comp.formula 'C13 H9 N5 O4' _chem_comp.formula_weight 299.242 _chem_comp.id HO1 _chem_comp.mon_nstd_flag . _chem_comp.name '3-hydroxy-4-oxo-6-[3-(1H-tetrazol-5-yl)phenyl]-1,4-dihydropyridine-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAB CAV HO1 doub 150 n n OAD CAS HO1 sing 151 n n CAV CAS HO1 sing 152 n n CAV CAI HO1 sing 153 n n CAS CAU HO1 doub 154 n n CAI CAR HO1 doub 155 n n OAC CAO HO1 doub 156 n n CAU CAO HO1 sing 157 n n CAU NAN HO1 sing 158 n n NAK NAM HO1 sing 159 n y NAK NAJ HO1 doub 160 n y NAM CAT HO1 sing 161 n y CAO OAA HO1 sing 162 n n CAR NAN HO1 sing 163 n n CAR CAP HO1 sing 164 n n CAH CAP HO1 doub 165 n y CAH CAQ HO1 sing 166 n y NAJ NAL HO1 sing 167 n y CAP CAF HO1 sing 168 n y CAT CAQ HO1 sing 169 n n CAT NAL HO1 doub 170 n y CAQ CAG HO1 doub 171 n y CAF CAE HO1 doub 172 n y CAG CAE HO1 sing 173 n y OAA H1 HO1 sing 174 n n NAN H2 HO1 sing 175 n n OAD H3 HO1 sing 176 n n CAI H4 HO1 sing 177 n n CAH H5 HO1 sing 178 n n CAF H6 HO1 sing 179 n n CAE H7 HO1 sing 180 n n CAG H8 HO1 sing 181 n n NAM H9 HO1 sing 182 n n # _atom_sites.entry_id 6E3P _atom_sites.fract_transf_matrix[1][1] 0.013342 _atom_sites.fract_transf_matrix[1][2] 0.007703 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 901 901 MN MN . C 2 MN A 1 902 902 MN MN . D 3 HO1 A 1 903 1 HO1 DRG . E 3 HO1 A 1 904 5 HO1 DRG . F 4 HOH A 1 1001 8 HOH HOH . F 4 HOH A 2 1002 1 HOH HOH . F 4 HOH A 3 1003 4 HOH HOH . F 4 HOH A 4 1004 6 HOH HOH . F 4 HOH A 5 1005 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAA HO1 . . . E 3 -18.418 12.44 137.893 1 46.26 ? OAA HO1 904 A 1 HETATM 2 C CAO HO1 . . . E 3 -19.644 12.51 137.679 1 49.14 ? CAO HO1 904 A 1 HETATM 3 O OAC HO1 . . . E 3 -20.141 11.436 137.282 1 46.7 ? OAC HO1 904 A 1 HETATM 4 C CAU HO1 . . . E 3 -20.421 13.701 137.994 1 54.99 ? CAU HO1 904 A 1 HETATM 5 N NAN HO1 . . . E 3 -21.471 14.318 137.124 1 50.72 ? NAN HO1 904 A 1 HETATM 6 C CAS HO1 . . . E 3 -20.182 14.36 139.258 1 57.24 ? CAS HO1 904 A 1 HETATM 7 O OAD HO1 . . . E 3 -19.207 13.854 140.123 1 51.02 ? OAD HO1 904 A 1 HETATM 8 C CAV HO1 . . . E 3 -20.901 15.524 139.663 1 55.79 ? CAV HO1 904 A 1 HETATM 9 O OAB HO1 . . . E 3 -20.72 16.123 140.734 1 55.56 ? OAB HO1 904 A 1 HETATM 10 C CAI HO1 . . . E 3 -21.873 16.061 138.829 1 54.15 ? CAI HO1 904 A 1 HETATM 11 C CAR HO1 . . . E 3 -22.197 15.518 137.575 1 50.76 ? CAR HO1 904 A 1 HETATM 12 C CAP HO1 . . . E 3 -23.242 16.192 136.886 1 50.2 ? CAP HO1 904 A 1 HETATM 13 C CAH HO1 . . . E 3 -24.255 16.911 137.588 1 50.94 ? CAH HO1 904 A 1 HETATM 14 C CAF HO1 . . . E 3 -23.358 16.162 135.501 1 53.75 ? CAF HO1 904 A 1 HETATM 15 C CAE HO1 . . . E 3 -24.412 16.833 134.843 1 51.45 ? CAE HO1 904 A 1 HETATM 16 C CAG HO1 . . . E 3 -25.388 17.536 135.555 1 51.04 ? CAG HO1 904 A 1 HETATM 17 C CAQ HO1 . . . E 3 -25.335 17.597 136.965 1 51.83 ? CAQ HO1 904 A 1 HETATM 18 C CAT HO1 . . . E 3 -26.312 18.279 137.691 1 49.77 ? CAT HO1 904 A 1 HETATM 19 N NAM HO1 . . . E 3 -26.259 18.748 138.939 1 45.35 ? NAM HO1 904 A 1 HETATM 20 N NAK HO1 . . . E 3 -27.439 19.295 139.174 1 42.46 ? NAK HO1 904 A 1 HETATM 21 N NAJ HO1 . . . E 3 -28.165 19.197 138.234 1 41.27 ? NAJ HO1 904 A 1 HETATM 22 N NAL HO1 . . . E 3 -27.557 18.606 137.296 1 48.71 ? NAL HO1 904 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 22 #