data_6E4C
#
_model_server_result.job_id            AFIPNCCk-4lBkj20ZGpOzA 
_model_server_result.datetime_utc      '2024-11-05 00:59:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6e4c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":903}' 
#
_entry.id    6E4C 
#
_exptl.entry_id    6E4C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              329.264 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-hydroxy-6-[2-methyl-4-(5-oxo-4,5-dihydro-1,2,4-oxadiazol-3-yl)phenyl]-4-oxo-1,4-dihydropyridine-2-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6E4C 
_cell.length_a            75.164 
_cell.length_b            75.164 
_cell.length_c            120.628 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6E4C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        180 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 62 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 47 A HIS 41 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc2 A OE2 GLU 74 A GLU 80 1_555 C MN MN . A MN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc3 A OD2 ASP 102 A ASP 108 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
metalc ? metalc4 A OD1 ASP 102 A ASP 108 1_555 C MN MN . A MN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? 
metalc ? metalc5 A OE2 GLU 113 A GLU 119 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc6 A O ILE 114 A ILE 120 1_555 B MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? 
metalc ? metalc7 B MN MN . A MN 901 1_555 D OAF HRJ . A HRJ 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc8 B MN MN . A MN 901 1_555 D OAC HRJ . A HRJ 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc9 C MN MN . A MN 902 1_555 D OAB HRJ . A HRJ 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? 
metalc ? metalc10 C MN MN . A MN 902 1_555 D OAF HRJ . A HRJ 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? 
metalc ? metalc11 C MN MN . A MN 902 1_555 F O HOH . A HOH 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc12 C MN MN . A MN 902 1_555 F O HOH . A HOH 1010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? 
#
_chem_comp.formula           'C15 H11 N3 O6' 
_chem_comp.formula_weight    329.264 
_chem_comp.id                HRJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-hydroxy-6-[2-methyl-4-(5-oxo-4,5-dihydro-1,2,4-oxadiazol-3-yl)phenyl]-4-oxo-1,4-dihydropyridine-2-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OAC CAW HRJ doub 161 n n 
OAF CAT HRJ sing 162 n n 
CAW CAT HRJ sing 163 n n 
CAW CAJ HRJ sing 164 n n 
CAT CAV HRJ doub 165 n n 
CAJ CAR HRJ doub 166 n n 
OAB CAO HRJ doub 167 n n 
CAV CAO HRJ sing 168 n n 
CAV NAL HRJ sing 169 n n 
CAA CAP HRJ sing 170 n n 
CAO OAE HRJ sing 171 n n 
CAR NAL HRJ sing 172 n n 
CAR CAU HRJ sing 173 n n 
CAP CAU HRJ doub 174 n y 
CAP CAI HRJ sing 175 n y 
CAU CAH HRJ sing 176 n y 
CAI CAQ HRJ doub 177 n y 
CAH CAG HRJ doub 178 n y 
CAQ CAG HRJ sing 179 n y 
CAQ CAS HRJ sing 180 n n 
NAM CAS HRJ sing 181 n n 
NAM CAX HRJ sing 182 n n 
CAS NAK HRJ doub 183 n n 
OAD CAX HRJ doub 184 n n 
CAX OAN HRJ sing 185 n n 
NAK OAN HRJ sing 186 n n 
OAE H1 HRJ sing 187 n n 
OAF H2 HRJ sing 188 n n 
CAJ H3 HRJ sing 189 n n 
CAA H5 HRJ sing 190 n n 
CAA H6 HRJ sing 191 n n 
CAA H7 HRJ sing 192 n n 
CAI H8 HRJ sing 193 n n 
CAH H9 HRJ sing 194 n n 
CAG H10 HRJ sing 195 n n 
NAM H11 HRJ sing 196 n n 
NAL H12 HRJ sing 197 n n 
#
_atom_sites.entry_id                     6E4C 
_atom_sites.fract_transf_matrix[1][1]    0.013304 
_atom_sites.fract_transf_matrix[1][2]    0.007681 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015362 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00829 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MN A 1 901 901 MN MN . 
C 2 MN A 1 902 902 MN MN . 
D 3 HRJ A 1 903 1 HRJ DRG . 
E 4 EDO A 1 904 1 EDO EDO . 
F 5 HOH A 1 1001 19 HOH HOH . 
F 5 HOH A 2 1002 1 HOH HOH . 
F 5 HOH A 3 1003 33 HOH HOH . 
F 5 HOH A 4 1004 3 HOH HOH . 
F 5 HOH A 5 1005 6 HOH HOH . 
F 5 HOH A 6 1006 4 HOH HOH . 
F 5 HOH A 7 1007 7 HOH HOH . 
F 5 HOH A 8 1008 20 HOH HOH . 
F 5 HOH A 9 1009 32 HOH HOH . 
F 5 HOH A 10 1010 2 HOH HOH . 
F 5 HOH A 11 1011 42 HOH HOH . 
F 5 HOH A 12 1012 21 HOH HOH . 
F 5 HOH A 13 1013 41 HOH HOH . 
F 5 HOH A 14 1014 36 HOH HOH . 
F 5 HOH A 15 1015 23 HOH HOH . 
F 5 HOH A 16 1016 13 HOH HOH . 
F 5 HOH A 17 1017 16 HOH HOH . 
F 5 HOH A 18 1018 39 HOH HOH . 
F 5 HOH A 19 1019 9 HOH HOH . 
F 5 HOH A 20 1020 24 HOH HOH . 
F 5 HOH A 21 1021 15 HOH HOH . 
F 5 HOH A 22 1022 10 HOH HOH . 
F 5 HOH A 23 1023 5 HOH HOH . 
F 5 HOH A 24 1024 25 HOH HOH . 
F 5 HOH A 25 1025 40 HOH HOH . 
F 5 HOH A 26 1026 27 HOH HOH . 
F 5 HOH A 27 1027 18 HOH HOH . 
F 5 HOH A 28 1028 17 HOH HOH . 
F 5 HOH A 29 1029 35 HOH HOH . 
F 5 HOH A 30 1030 14 HOH HOH . 
F 5 HOH A 31 1031 8 HOH HOH . 
F 5 HOH A 32 1032 28 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAB HRJ . . . D 3 -17.393 16.171 14.534 1 58.37 ? OAB HRJ 903 A 1 
HETATM 2 C CAO HRJ . . . D 3 -18.387 16.456 15.248 1 51.1 ? CAO HRJ 903 A 1 
HETATM 3 O OAE HRJ . . . D 3 -18.304 16.417 16.473 1 49.07 ? OAE HRJ 903 A 1 
HETATM 4 C CAV HRJ . . . D 3 -19.573 16.957 14.767 1 48.88 ? CAV HRJ 903 A 1 
HETATM 5 N NAL HRJ . . . D 3 -20.578 17.115 15.728 1 47.02 ? NAL HRJ 903 A 1 
HETATM 6 C CAT HRJ . . . D 3 -19.808 17.285 13.447 1 44.44 ? CAT HRJ 903 A 1 
HETATM 7 O OAF HRJ . . . D 3 -18.842 17.086 12.553 1 45.77 ? OAF HRJ 903 A 1 
HETATM 8 C CAW HRJ . . . D 3 -21.028 17.826 13.055 1 51.08 ? CAW HRJ 903 A 1 
HETATM 9 O OAC HRJ . . . D 3 -21.288 18.155 11.883 1 46.73 ? OAC HRJ 903 A 1 
HETATM 10 C CAJ HRJ . . . D 3 -22.004 17.984 14.046 1 47.75 ? CAJ HRJ 903 A 1 
HETATM 11 C CAR HRJ . . . D 3 -21.818 17.603 15.382 1 47.62 ? CAR HRJ 903 A 1 
HETATM 12 C CAU HRJ . . . D 3 -22.903 17.853 16.266 1 46.26 ? CAU HRJ 903 A 1 
HETATM 13 C CAP HRJ . . . D 3 -24.159 17.287 16.016 1 48.49 ? CAP HRJ 903 A 1 
HETATM 14 C CAA HRJ . . . D 3 -24.383 16.366 14.949 1 54.78 ? CAA HRJ 903 A 1 
HETATM 15 C CAI HRJ . . . D 3 -25.243 17.612 16.821 1 49.39 ? CAI HRJ 903 A 1 
HETATM 16 C CAH HRJ . . . D 3 -22.783 18.75 17.331 1 46.54 ? CAH HRJ 903 A 1 
HETATM 17 C CAG HRJ . . . D 3 -23.883 19.061 18.15 1 50.66 ? CAG HRJ 903 A 1 
HETATM 18 C CAQ HRJ . . . D 3 -25.141 18.487 17.913 1 54.6 ? CAQ HRJ 903 A 1 
HETATM 19 C CAS HRJ . . . D 3 -26.255 18.783 18.648 1 60.12 ? CAS HRJ 903 A 1 
HETATM 20 N NAK HRJ . . . D 3 -26.305 19.238 19.909 1 58.43 ? NAK HRJ 903 A 1 
HETATM 21 O OAN HRJ . . . D 3 -27.883 19.425 20.17 1 64.69 ? OAN HRJ 903 A 1 
HETATM 22 C CAX HRJ . . . D 3 -28.457 19.091 19.033 1 62.36 ? CAX HRJ 903 A 1 
HETATM 23 O OAD HRJ . . . D 3 -29.684 19.112 18.82 1 69.37 ? OAD HRJ 903 A 1 
HETATM 24 N NAM HRJ . . . D 3 -27.521 18.728 18.133 1 58.66 ? NAM HRJ 903 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           24 
#