data_6E4W
#
_model_server_result.job_id            HhWeUm3nUzBiD7-pDgT17A 
_model_server_result.datetime_utc      '2024-11-22 04:19:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6e4w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":602}' 
#
_entry.id    6E4W 
#
_exptl.entry_id    6E4W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              533.475 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1-O-(4,6-difluoro-5-{4-[(2S)-oxan-2-yl]phenyl}-1H-indole-3-carbonyl)-beta-D-glucopyranuronic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6E4W 
_cell.length_a            123.97 
_cell.length_b            123.97 
_cell.length_c            402.12 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6E4W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA hexameric 6 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L 1 1 
A,B,C,D,E,F,G,H,I,J,K,L 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_444 -y-1,-x-1,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 -61.985 -107.361169 -67.02 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ARG 173 A ARG 171 1_555 A N TPO 174 A TPO 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale2 A C TPO 174 A TPO 172 1_555 A N SER 175 A SER 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale3 B C ARG 41 B ARG 107 1_555 B N SEP 42 B SEP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 B C SEP 42 B SEP 108 1_555 B N GLN 43 B GLN 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? 
#
_chem_comp.formula           'C26 H25 F2 N O9' 
_chem_comp.formula_weight    533.475 
_chem_comp.id                HUG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1-O-(4,6-difluoro-5-{4-[(2S)-oxan-2-yl]phenyl}-1H-indole-3-carbonyl)-beta-D-glucopyranuronic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O4 C21 HUG doub 233 n n 
O5 C21 HUG sing 234 n n 
C21 C20 HUG sing 235 n n 
C20 O3 HUG sing 236 n n 
C20 C19 HUG sing 237 n n 
O3 C16 HUG sing 238 n n 
O6 C19 HUG sing 239 n n 
C19 C18 HUG sing 240 n n 
C23 C24 HUG sing 241 n n 
C23 C22 HUG sing 242 n n 
C24 C25 HUG sing 243 n n 
C5 C4 HUG doub 244 n y 
C5 C6 HUG sing 245 n y 
C4 C3 HUG sing 246 n y 
C16 O2 HUG sing 247 n n 
C16 C17 HUG sing 248 n n 
O2 C15 HUG sing 249 n n 
C14 C13 HUG doub 250 n y 
C14 N1 HUG sing 251 n y 
C15 C13 HUG sing 252 n n 
C15 O1 HUG doub 253 n n 
C13 C11 HUG sing 254 n y 
N1 C10 HUG sing 255 n y 
C11 C10 HUG doub 256 n y 
C11 C12 HUG sing 257 n y 
C10 C9 HUG sing 258 n y 
F1 C12 HUG sing 259 n n 
C12 C7 HUG doub 260 n y 
C9 C8 HUG doub 261 n y 
C18 C17 HUG sing 262 n n 
C18 O7 HUG sing 263 n n 
C7 C8 HUG sing 264 n y 
C7 C6 HUG sing 265 n n 
C8 F2 HUG sing 266 n n 
C6 C1 HUG doub 267 n y 
C17 O8 HUG sing 268 n n 
C3 C22 HUG sing 269 n n 
C3 C2 HUG doub 270 n y 
C25 C26 HUG sing 271 n n 
C22 O9 HUG sing 272 n n 
C1 C2 HUG sing 273 n y 
O9 C26 HUG sing 274 n n 
C4 H1 HUG sing 275 n n 
C9 H2 HUG sing 276 n n 
C20 H3 HUG sing 277 n n 
C18 H4 HUG sing 278 n n 
C16 H5 HUG sing 279 n n 
C19 H6 HUG sing 280 n n 
C26 H7 HUG sing 281 n n 
C26 H8 HUG sing 282 n n 
C1 H9 HUG sing 283 n n 
C2 H10 HUG sing 284 n n 
C5 H11 HUG sing 285 n n 
C14 H12 HUG sing 286 n n 
N1 H13 HUG sing 287 n n 
C17 H14 HUG sing 288 n n 
O5 H15 HUG sing 289 n n 
O6 H16 HUG sing 290 n n 
O7 H17 HUG sing 291 n n 
O8 H18 HUG sing 292 n n 
C22 H19 HUG sing 293 n n 
C23 H20 HUG sing 294 n n 
C23 H21 HUG sing 295 n n 
C24 H22 HUG sing 296 n n 
C24 H23 HUG sing 297 n n 
C25 H24 HUG sing 298 n n 
C25 H25 HUG sing 299 n n 
#
_atom_sites.entry_id                     6E4W 
_atom_sites.fract_transf_matrix[1][1]    0.008066 
_atom_sites.fract_transf_matrix[1][2]    0.004657 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009314 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002487 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 STU A 1 601 1549 STU STU . 
E 5 HUG A 1 602 4000 HUG PFE . 
F 6 CL A 1 603 1 CL CL . 
G 6 CL A 1 604 3 CL CL . 
H 6 CL A 1 605 4 CL CL . 
I 7 AMP C 1 401 1 AMP AMP . 
J 7 AMP C 1 402 2 AMP AMP . 
K 8 ADP C 1 403 3 ADP ADP . 
L 9 SO4 C 1 404 2 SO4 SO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 HUG . . . E 5 48.771 -82.944 -39.85 1 76.65 ? C4 HUG 602 A 1 
HETATM 2 C C7 HUG . . . E 5 46.598 -79.942 -39.305 1 90.17 ? C7 HUG 602 A 1 
HETATM 3 C C6 HUG . . . E 5 47.706 -80.884 -39.202 1 83.28 ? C6 HUG 602 A 1 
HETATM 4 C C9 HUG . . . E 5 45.81 -77.598 -39.397 1 94.12 ? C9 HUG 602 A 1 
HETATM 5 C C13 HUG . . . E 5 42.808 -79.631 -39.624 1 107 ? C13 HUG 602 A 1 
HETATM 6 C C20 HUG . . . E 5 38.886 -83.41 -41.336 1 141.8 ? C20 HUG 602 A 1 
HETATM 7 C C21 HUG . . . E 5 38.827 -83.602 -42.841 1 144.25 ? C21 HUG 602 A 1 
HETATM 8 C C8 HUG . . . E 5 46.825 -78.541 -39.302 1 90.24 ? C8 HUG 602 A 1 
HETATM 9 C C18 HUG . . . E 5 37.604 -82.676 -39.343 1 143.54 ? C18 HUG 602 A 1 
HETATM 10 C C16 HUG . . . E 5 39.921 -81.895 -39.838 1 136.92 ? C16 HUG 602 A 1 
HETATM 11 C C19 HUG . . . E 5 37.494 -83.094 -40.803 1 141.96 ? C19 HUG 602 A 1 
HETATM 12 C C26 HUG . . . E 5 51.607 -85.581 -37.649 1 77.7 ? C26 HUG 602 A 1 
HETATM 13 C C1 HUG . . . E 5 48.764 -80.604 -38.34 1 80.25 ? C1 HUG 602 A 1 
HETATM 14 C C2 HUG . . . E 5 49.824 -81.495 -38.236 1 79.31 ? C2 HUG 602 A 1 
HETATM 15 C C3 HUG . . . E 5 49.829 -82.666 -38.991 1 77.29 ? C3 HUG 602 A 1 
HETATM 16 C C5 HUG . . . E 5 47.708 -82.053 -39.957 1 80.19 ? C5 HUG 602 A 1 
HETATM 17 C C10 HUG . . . E 5 44.51 -78.104 -39.5 1 99.64 ? C10 HUG 602 A 1 
HETATM 18 C C11 HUG . . . E 5 44.228 -79.49 -39.507 1 100.95 ? C11 HUG 602 A 1 
HETATM 19 C C12 HUG . . . E 5 45.289 -80.405 -39.409 1 96.65 ? C12 HUG 602 A 1 
HETATM 20 F F1 HUG . . . E 5 45.025 -81.696 -39.416 1 97.24 ? F1 HUG 602 A 1 
HETATM 21 C C14 HUG . . . E 5 42.263 -78.359 -39.684 1 105.65 ? C14 HUG 602 A 1 
HETATM 22 N N1 HUG . . . E 5 43.296 -77.423 -39.609 1 104.16 ? N1 HUG 602 A 1 
HETATM 23 C C15 HUG . . . E 5 42.119 -80.9 -39.667 1 116.13 ? C15 HUG 602 A 1 
HETATM 24 O O1 HUG . . . E 5 42.61 -82.014 -39.613 1 114.01 ? O1 HUG 602 A 1 
HETATM 25 O O2 HUG . . . E 5 40.755 -80.731 -39.782 1 128.2 ? O2 HUG 602 A 1 
HETATM 26 C C17 HUG . . . E 5 38.592 -81.528 -39.189 1 141.02 ? C17 HUG 602 A 1 
HETATM 27 O O3 HUG . . . E 5 39.723 -82.254 -41.193 1 140.26 ? O3 HUG 602 A 1 
HETATM 28 O O4 HUG . . . E 5 38.77 -82.754 -43.708 1 145.42 ? O4 HUG 602 A 1 
HETATM 29 O O5 HUG . . . E 5 38.846 -84.909 -43.174 1 144.18 ? O5 HUG 602 A 1 
HETATM 30 O O6 HUG . . . E 5 36.64 -84.226 -40.923 1 139.16 ? O6 HUG 602 A 1 
HETATM 31 O O7 HUG . . . E 5 36.326 -82.288 -38.85 1 146.18 ? O7 HUG 602 A 1 
HETATM 32 O O8 HUG . . . E 5 38.79 -81.237 -37.811 1 139.37 ? O8 HUG 602 A 1 
HETATM 33 F F2 HUG . . . E 5 48.071 -78.103 -39.203 1 89.43 ? F2 HUG 602 A 1 
HETATM 34 C C22 HUG . . . E 5 50.988 -83.62 -38.864 1 78.1 ? C22 HUG 602 A 1 
HETATM 35 C C23 HUG . . . E 5 51.263 -84.302 -40.19 1 78.49 ? C23 HUG 602 A 1 
HETATM 36 C C24 HUG . . . E 5 52.294 -85.41 -40.018 1 78.98 ? C24 HUG 602 A 1 
HETATM 37 C C25 HUG . . . E 5 51.9 -86.356 -38.903 1 77.21 ? C25 HUG 602 A 1 
HETATM 38 O O9 HUG . . . E 5 50.596 -84.587 -37.88 1 77.88 ? O9 HUG 602 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           32 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           362 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           38 
#