data_6E4Z # _model_server_result.job_id Ysrk3Elu64TmbE9wbsEgUA _model_server_result.datetime_utc '2025-04-07 20:18:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6e4z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 6E4Z # _exptl.entry_id 6E4Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6E4Z _cell.length_a 70.929 _cell.length_b 99.782 _cell.length_c 86.328 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6E4Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 98 H CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.063 ? disulf ? disulf2 A SG CYS 143 H CYS 140 1_555 A SG CYS 199 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 B SG CYS 23 L CYS 23 1_555 B SG CYS 93 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf4 B SG CYS 139 L CYS 134 1_555 B SG CYS 199 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A C THR 60 H THR 57 1_555 A N NEP 61 H NEP 58 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C THR 60 H THR 57 1_555 A N HIP 61 H HIP 58 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C NEP 61 H NEP 58 1_555 A N TYR 62 H TYR 59 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C HIP 61 H HIP 58 1_555 A N TYR 62 H TYR 59 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 C C ASP 6 P ASP 37 1_555 C N TYS 7 P TYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 C C TYS 7 P TYS 38 1_555 C N GLU 8 P GLU 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale7 C C ARG 15 P ARG 46 1_555 C N SEP 16 P SEP 47 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.325 ? covale ? covale8 C C ARG 15 P ARG 46 1_555 C N SEP 16 P SEP 47 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.325 ? covale ? covale9 C C SEP 16 P SEP 47 1_555 C N GLU 17 P GLU 48 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 C C SEP 16 P SEP 47 1_555 C N GLU 17 P GLU 48 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 A OD1 ASP 56 H ASP 53 1_555 D ZN ZN . H ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc2 A NE2 HIS 167 H HIS 164 1_555 E ZN ZN . L ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc3 D ZN ZN . H ZN 301 4_455 B OD1 ASP 65 L ASP 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? metalc ? metalc4 D ZN ZN . H ZN 301 1_555 K O HOH . L HOH 446 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc5 D ZN ZN . H ZN 301 1_555 C OE2 GLU 17 P GLU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc6 B NE2 HIS 31 L HIS 27 1_555 H ZN ZN . L ZN 304 1_555 D ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc7 B OE1 GLU 86 L GLU 81 1_555 G ZN ZN . L ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc8 B OE2 GLU 86 L GLU 81 1_555 G ZN ZN . L ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc9 B OD1 ASN 142 L ASN 137 1_555 E ZN ZN . L ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc10 B OD1 ASN 143 L ASN 138 1_555 E ZN ZN . L ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc11 B OD2 ASP 190 L ASP 185 1_555 F ZN ZN . L ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc12 B NE2 HIS 194 L HIS 189 1_555 F ZN ZN . L ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc13 F ZN ZN . L ZN 302 1_555 I O1 SO4 . L SO4 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc14 G ZN ZN . L ZN 303 1_555 K O HOH . L HOH 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc15 H ZN ZN . L ZN 304 1_555 C OE2 GLU 18 P GLU 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6E4Z _atom_sites.fract_transf_matrix[1][1] 0.014099 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010022 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011584 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN H 1 301 1 ZN ZN . E 4 ZN L 1 301 2 ZN ZN . F 4 ZN L 1 302 3 ZN ZN . G 4 ZN L 1 303 4 ZN ZN . H 4 ZN L 1 304 5 ZN ZN . I 5 SO4 L 1 305 1 SO4 SO4 . J 6 HOH H 1 401 58 HOH HOH . J 6 HOH H 2 402 65 HOH HOH . J 6 HOH H 3 403 71 HOH HOH . J 6 HOH H 4 404 77 HOH HOH . J 6 HOH H 5 405 3 HOH HOH . J 6 HOH H 6 406 123 HOH HOH . J 6 HOH H 7 407 10 HOH HOH . J 6 HOH H 8 408 22 HOH HOH . J 6 HOH H 9 409 60 HOH HOH . J 6 HOH H 10 410 74 HOH HOH . J 6 HOH H 11 411 20 HOH HOH . J 6 HOH H 12 412 19 HOH HOH . J 6 HOH H 13 413 51 HOH HOH . J 6 HOH H 14 414 57 HOH HOH . J 6 HOH H 15 415 117 HOH HOH . J 6 HOH H 16 416 53 HOH HOH . J 6 HOH H 17 417 15 HOH HOH . J 6 HOH H 18 418 37 HOH HOH . J 6 HOH H 19 419 1 HOH HOH . J 6 HOH H 20 420 122 HOH HOH . J 6 HOH H 21 421 73 HOH HOH . J 6 HOH H 22 422 129 HOH HOH . J 6 HOH H 23 423 85 HOH HOH . J 6 HOH H 24 424 41 HOH HOH . J 6 HOH H 25 425 48 HOH HOH . J 6 HOH H 26 426 11 HOH HOH . J 6 HOH H 27 427 62 HOH HOH . J 6 HOH H 28 428 5 HOH HOH . J 6 HOH H 29 429 6 HOH HOH . J 6 HOH H 30 430 4 HOH HOH . J 6 HOH H 31 431 86 HOH HOH . J 6 HOH H 32 432 38 HOH HOH . J 6 HOH H 33 433 45 HOH HOH . J 6 HOH H 34 434 115 HOH HOH . J 6 HOH H 35 435 18 HOH HOH . J 6 HOH H 36 436 76 HOH HOH . J 6 HOH H 37 437 80 HOH HOH . J 6 HOH H 38 438 23 HOH HOH . J 6 HOH H 39 439 9 HOH HOH . J 6 HOH H 40 440 78 HOH HOH . J 6 HOH H 41 441 64 HOH HOH . J 6 HOH H 42 442 69 HOH HOH . J 6 HOH H 43 443 44 HOH HOH . J 6 HOH H 44 444 26 HOH HOH . J 6 HOH H 45 445 70 HOH HOH . J 6 HOH H 46 446 17 HOH HOH . J 6 HOH H 47 447 140 HOH HOH . J 6 HOH H 48 448 8 HOH HOH . J 6 HOH H 49 449 55 HOH HOH . J 6 HOH H 50 450 47 HOH HOH . J 6 HOH H 51 451 43 HOH HOH . J 6 HOH H 52 452 93 HOH HOH . J 6 HOH H 53 453 141 HOH HOH . J 6 HOH H 54 454 88 HOH HOH . J 6 HOH H 55 455 142 HOH HOH . J 6 HOH H 56 456 82 HOH HOH . J 6 HOH H 57 457 118 HOH HOH . J 6 HOH H 58 458 52 HOH HOH . J 6 HOH H 59 459 84 HOH HOH . J 6 HOH H 60 460 114 HOH HOH . J 6 HOH H 61 461 56 HOH HOH . J 6 HOH H 62 462 127 HOH HOH . J 6 HOH H 63 463 91 HOH HOH . J 6 HOH H 64 464 49 HOH HOH . K 6 HOH L 1 401 90 HOH HOH . K 6 HOH L 2 402 109 HOH HOH . K 6 HOH L 3 403 81 HOH HOH . K 6 HOH L 4 404 21 HOH HOH . K 6 HOH L 5 405 7 HOH HOH . K 6 HOH L 6 406 96 HOH HOH . K 6 HOH L 7 407 68 HOH HOH . K 6 HOH L 8 408 39 HOH HOH . K 6 HOH L 9 409 66 HOH HOH . K 6 HOH L 10 410 124 HOH HOH . K 6 HOH L 11 411 29 HOH HOH . K 6 HOH L 12 412 83 HOH HOH . K 6 HOH L 13 413 89 HOH HOH . K 6 HOH L 14 414 119 HOH HOH . K 6 HOH L 15 415 95 HOH HOH . K 6 HOH L 16 416 46 HOH HOH . K 6 HOH L 17 417 112 HOH HOH . K 6 HOH L 18 418 87 HOH HOH . K 6 HOH L 19 419 33 HOH HOH . K 6 HOH L 20 420 13 HOH HOH . K 6 HOH L 21 421 61 HOH HOH . K 6 HOH L 22 422 137 HOH HOH . K 6 HOH L 23 423 32 HOH HOH . K 6 HOH L 24 424 94 HOH HOH . K 6 HOH L 25 425 31 HOH HOH . K 6 HOH L 26 426 24 HOH HOH . K 6 HOH L 27 427 14 HOH HOH . K 6 HOH L 28 428 75 HOH HOH . K 6 HOH L 29 429 2 HOH HOH . K 6 HOH L 30 430 67 HOH HOH . K 6 HOH L 31 431 121 HOH HOH . K 6 HOH L 32 432 139 HOH HOH . K 6 HOH L 33 433 54 HOH HOH . K 6 HOH L 34 434 120 HOH HOH . K 6 HOH L 35 435 59 HOH HOH . K 6 HOH L 36 436 27 HOH HOH . K 6 HOH L 37 437 104 HOH HOH . K 6 HOH L 38 438 92 HOH HOH . K 6 HOH L 39 439 42 HOH HOH . K 6 HOH L 40 440 102 HOH HOH . K 6 HOH L 41 441 50 HOH HOH . K 6 HOH L 42 442 101 HOH HOH . K 6 HOH L 43 443 110 HOH HOH . K 6 HOH L 44 444 138 HOH HOH . K 6 HOH L 45 445 116 HOH HOH . K 6 HOH L 46 446 63 HOH HOH . K 6 HOH L 47 447 131 HOH HOH . K 6 HOH L 48 448 126 HOH HOH . K 6 HOH L 49 449 130 HOH HOH . K 6 HOH L 50 450 133 HOH HOH . L 6 HOH P 1 101 16 HOH HOH . L 6 HOH P 2 102 34 HOH HOH . L 6 HOH P 3 103 100 HOH HOH . L 6 HOH P 4 104 28 HOH HOH . L 6 HOH P 5 105 30 HOH HOH . L 6 HOH P 6 106 79 HOH HOH . L 6 HOH P 7 107 25 HOH HOH . L 6 HOH P 8 108 35 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -25.805 _atom_site.Cartn_y 29.442 _atom_site.Cartn_z -34.919 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 102.28 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id L _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #