data_6E5R
#
_model_server_result.job_id            ICR2c0CSMUzyc5WWjXvllA 
_model_server_result.datetime_utc      '2024-11-15 13:56:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6e5r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":204}' 
#
_entry.id    6E5R 
#
_exptl.entry_id    6E5R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6E5R 
_cell.length_a            30.857 
_cell.length_b            68.182 
_cell.length_c            130.04 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6E5R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 I N N 
? 3 J N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             28 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              28 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             28 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              28 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.034 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     6E5R 
_atom_sites.fract_transf_matrix[1][1]    0.032408 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014667 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00769 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ACT A 1 201 8 ACT ACT . 
D 3 GOL A 1 202 1 GOL GOL . 
E 3 GOL A 1 203 4 GOL GOL . 
F 3 GOL A 1 204 7 GOL GOL . 
G 2 ACT B 1 201 9 ACT ACT . 
H 2 ACT B 1 202 10 ACT ACT . 
I 3 GOL B 1 203 2 GOL GOL . 
J 3 GOL B 1 204 5 GOL GOL . 
K 4 HOH A 1 301 10 HOH HOH . 
K 4 HOH A 2 302 6 HOH HOH . 
K 4 HOH A 3 303 19 HOH HOH . 
K 4 HOH A 4 304 9 HOH HOH . 
K 4 HOH A 5 305 12 HOH HOH . 
K 4 HOH A 6 306 38 HOH HOH . 
K 4 HOH A 7 307 33 HOH HOH . 
K 4 HOH A 8 308 23 HOH HOH . 
K 4 HOH A 9 309 8 HOH HOH . 
K 4 HOH A 10 310 34 HOH HOH . 
K 4 HOH A 11 311 4 HOH HOH . 
K 4 HOH A 12 312 24 HOH HOH . 
K 4 HOH A 13 313 21 HOH HOH . 
K 4 HOH A 14 314 3 HOH HOH . 
K 4 HOH A 15 315 36 HOH HOH . 
K 4 HOH A 16 316 27 HOH HOH . 
L 4 HOH B 1 301 5 HOH HOH . 
L 4 HOH B 2 302 29 HOH HOH . 
L 4 HOH B 3 303 42 HOH HOH . 
L 4 HOH B 4 304 15 HOH HOH . 
L 4 HOH B 5 305 41 HOH HOH . 
L 4 HOH B 6 306 20 HOH HOH . 
L 4 HOH B 7 307 44 HOH HOH . 
L 4 HOH B 8 308 31 HOH HOH . 
L 4 HOH B 9 309 22 HOH HOH . 
L 4 HOH B 10 310 40 HOH HOH . 
L 4 HOH B 11 311 28 HOH HOH . 
L 4 HOH B 12 312 43 HOH HOH . 
L 4 HOH B 13 313 7 HOH HOH . 
L 4 HOH B 14 314 17 HOH HOH . 
L 4 HOH B 15 315 30 HOH HOH . 
L 4 HOH B 16 316 1 HOH HOH . 
L 4 HOH B 17 317 32 HOH HOH . 
L 4 HOH B 18 318 13 HOH HOH . 
L 4 HOH B 19 319 35 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 3 -2.807 2.994 -42.655 1 55.2 ? C1 GOL 204 A 1 
HETATM 2 O O1 GOL . . . F 3 -2.671 4.21 -43.355 1 52.34 ? O1 GOL 204 A 1 
HETATM 3 C C2 GOL . . . F 3 -3.451 1.952 -43.561 1 69.13 ? C2 GOL 204 A 1 
HETATM 4 O O2 GOL . . . F 3 -3.406 2.404 -44.896 1 55.39 ? O2 GOL 204 A 1 
HETATM 5 C C3 GOL . . . F 3 -4.902 1.744 -43.145 1 60.58 ? C3 GOL 204 A 1 
HETATM 6 O O3 GOL . . . F 3 -4.966 1.413 -41.776 1 51.1 ? O3 GOL 204 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#