data_6E76 # _model_server_result.job_id thJeGRLfH88aA1xlMex10A _model_server_result.datetime_utc '2024-11-23 12:17:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6e76 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6E76 # _exptl.entry_id 6E76 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6E76 _cell.length_a 43.33 _cell.length_b 85.33 _cell.length_c 63.51 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6E76 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 86.66 85.33 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C OCS 1 A OCS 10 1_555 A N PRO 2 A PRO 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.299 ? covale ? covale2 B C OCS 1 B OCS 10 1_555 B N PRO 2 B PRO 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 6E76 _atom_sites.fract_transf_matrix[1][1] 0.023079 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011719 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015746 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 201 39 GOL GOL . D 2 GOL A 1 202 40 GOL GOL . E 3 SO4 B 1 201 36 SO4 SO4 . F 4 ACT B 1 202 37 ACT ACT . G 4 ACT B 1 203 38 ACT ACT . H 5 HOH A 1 301 10 HOH HOH . H 5 HOH A 2 302 22 HOH HOH . H 5 HOH A 3 303 20 HOH HOH . H 5 HOH A 4 304 4 HOH HOH . H 5 HOH A 5 305 23 HOH HOH . H 5 HOH A 6 306 12 HOH HOH . H 5 HOH A 7 307 6 HOH HOH . H 5 HOH A 8 308 3 HOH HOH . H 5 HOH A 9 309 1 HOH HOH . H 5 HOH A 10 310 35 HOH HOH . H 5 HOH A 11 311 14 HOH HOH . H 5 HOH A 12 312 27 HOH HOH . H 5 HOH A 13 313 21 HOH HOH . H 5 HOH A 14 314 25 HOH HOH . H 5 HOH A 15 315 29 HOH HOH . H 5 HOH A 16 316 34 HOH HOH . H 5 HOH A 17 317 9 HOH HOH . I 5 HOH B 1 301 26 HOH HOH . I 5 HOH B 2 302 31 HOH HOH . I 5 HOH B 3 303 17 HOH HOH . I 5 HOH B 4 304 5 HOH HOH . I 5 HOH B 5 305 8 HOH HOH . I 5 HOH B 6 306 18 HOH HOH . I 5 HOH B 7 307 7 HOH HOH . I 5 HOH B 8 308 16 HOH HOH . I 5 HOH B 9 309 28 HOH HOH . I 5 HOH B 10 310 13 HOH HOH . I 5 HOH B 11 311 33 HOH HOH . I 5 HOH B 12 312 19 HOH HOH . I 5 HOH B 13 313 11 HOH HOH . I 5 HOH B 14 314 32 HOH HOH . I 5 HOH B 15 315 24 HOH HOH . I 5 HOH B 16 316 2 HOH HOH . I 5 HOH B 17 317 30 HOH HOH . I 5 HOH B 18 318 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 46.934 43.672 78.422 1 54.51 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . C 2 46.858 44.953 78.928 1 38.7 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . C 2 47.882 42.955 79.356 1 62.9 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . C 2 48.595 43.857 80.139 1 66.67 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . C 2 46.945 42.078 80.178 1 54.73 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . C 2 47.008 40.82 79.602 1 39.9 ? O3 GOL 201 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #