data_6E7Z
#
_model_server_result.job_id            8SRVpZATw7khc0atCG2vXQ 
_model_server_result.datetime_utc      '2024-11-18 02:52:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6e7z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":801}' 
#
_entry.id    6E7Z 
#
_exptl.entry_id    6E7Z 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              750.598 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1R,2S,3S,4R,5S,6R)-5-{[(R)-[(2R)-2,3-bis{[(1S)-1-hydroxyoctyl]oxy}propoxy](hydroxy)phosphoryl]oxy}-2,4,6-trihydroxycyclohexane-1,3-diyl bis[dihydrogen (phosphate)]' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 166 A CYS 166 1_555 A SG CYS 192 A CYS 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf2 A SG CYS 253 A CYS 253 1_555 A SG CYS 284 A CYS 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf3 B SG CYS 166 B CYS 166 1_555 B SG CYS 192 B CYS 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf4 B SG CYS 253 B CYS 253 1_555 B SG CYS 284 B CYS 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf5 C SG CYS 166 C CYS 166 1_555 C SG CYS 192 C CYS 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf6 C SG CYS 253 C CYS 253 1_555 C SG CYS 284 C CYS 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf7 D SG CYS 166 D CYS 166 1_555 D SG CYS 192 D CYS 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf8 D SG CYS 253 D CYS 253 1_555 D SG CYS 284 D CYS 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
#
_chem_comp.formula           'C25 H53 O19 P3' 
_chem_comp.formula_weight    750.598 
_chem_comp.id                HZ7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1R,2S,3S,4R,5S,6R)-5-{[(R)-[(2R)-2,3-bis{[(1S)-1-hydroxyoctyl]oxy}propoxy](hydroxy)phosphoryl]oxy}-2,4,6-trihydroxycyclohexane-1,3-diyl bis[dihydrogen (phosphate)]' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6E7Z 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HZ7 A 1 801 801 HZ7 PIP . 
F 3 AQV A 1 802 900 AQV MOL . 
G 2 HZ7 B 1 801 801 HZ7 PIP . 
H 3 AQV B 1 802 900 AQV MOL . 
I 2 HZ7 C 1 801 801 HZ7 PIP . 
J 3 AQV C 1 802 900 AQV MOL . 
K 2 HZ7 D 1 801 801 HZ7 PIP . 
L 3 AQV D 1 802 900 AQV MOL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 HZ7 . . . I 2 118.496 157.764 178.753 1 138.92 ? C2 HZ7 801 C 1 
HETATM 2 C C3 HZ7 . . . I 2 117.076 157.612 179.284 1 138.92 ? C3 HZ7 801 C 1 
HETATM 3 C C4 HZ7 . . . I 2 116.822 158.724 180.283 1 138.92 ? C4 HZ7 801 C 1 
HETATM 4 C C5 HZ7 . . . I 2 117.63 158.308 181.497 1 138.92 ? C5 HZ7 801 C 1 
HETATM 5 C C6 HZ7 . . . I 2 119.097 158.52 181.152 1 138.92 ? C6 HZ7 801 C 1 
HETATM 6 C C1 HZ7 . . . I 2 119.505 157.706 179.909 1 138.92 ? C1 HZ7 801 C 1 
HETATM 7 C C10 HZ7 . . . I 2 110.987 160.176 183.513 1 138.92 ? C10 HZ7 801 C 1 
HETATM 8 C C11 HZ7 . . . I 2 111.897 161.263 182.948 1 138.92 ? C11 HZ7 801 C 1 
HETATM 9 C C12 HZ7 . . . I 2 109.915 157.139 180.285 1 138.92 ? C12 HZ7 801 C 1 
HETATM 10 C C13 HZ7 . . . I 2 108.684 157.875 179.774 1 138.92 ? C13 HZ7 801 C 1 
HETATM 11 C C14 HZ7 . . . I 2 111.024 162.429 182.491 1 138.92 ? C14 HZ7 801 C 1 
HETATM 12 C C15 HZ7 . . . I 2 111.68 163.792 182.685 1 138.92 ? C15 HZ7 801 C 1 
HETATM 13 C C16 HZ7 . . . I 2 111.887 164.173 184.151 1 138.92 ? C16 HZ7 801 C 1 
HETATM 14 C C17 HZ7 . . . I 2 110.617 164.056 184.987 1 138.92 ? C17 HZ7 801 C 1 
HETATM 15 C C18 HZ7 . . . I 2 109.561 165.089 184.622 1 138.92 ? C18 HZ7 801 C 1 
HETATM 16 C C19 HZ7 . . . I 2 108.25 164.738 185.291 1 138.92 ? C19 HZ7 801 C 1 
HETATM 17 C C20 HZ7 . . . I 2 108.136 157.224 178.51 1 138.92 ? C20 HZ7 801 C 1 
HETATM 18 C C21 HZ7 . . . I 2 108.2 158.202 177.343 1 138.92 ? C21 HZ7 801 C 1 
HETATM 19 C C22 HZ7 . . . I 2 106.84 158.381 176.681 1 138.92 ? C22 HZ7 801 C 1 
HETATM 20 C C23 HZ7 . . . I 2 106.665 157.433 175.503 1 138.92 ? C23 HZ7 801 C 1 
HETATM 21 C C24 HZ7 . . . I 2 105.276 157.577 174.895 1 138.92 ? C24 HZ7 801 C 1 
HETATM 22 C C25 HZ7 . . . I 2 105.086 156.645 173.72 1 138.92 ? C25 HZ7 801 C 1 
HETATM 23 C C7 HZ7 . . . I 2 113.63 157.668 183.369 1 138.92 ? C7 HZ7 801 C 1 
HETATM 24 C C8 HZ7 . . . I 2 112.464 158.384 182.705 1 138.92 ? C8 HZ7 801 C 1 
HETATM 25 C C9 HZ7 . . . I 2 111.698 157.362 181.865 1 138.92 ? C9 HZ7 801 C 1 
HETATM 26 O O1 HZ7 . . . I 2 119.291 159.919 180.945 1 138.92 ? O1 HZ7 801 C 1 
HETATM 27 O O10 HZ7 . . . I 2 120.338 160.468 178.713 1 138.92 ? O10 HZ7 801 C 1 
HETATM 28 O O11 HZ7 . . . I 2 122.635 159.702 178.882 1 138.92 ? O11 HZ7 801 C 1 
HETATM 29 O O12 HZ7 . . . I 2 121.218 158.793 177.088 1 138.92 ? O12 HZ7 801 C 1 
HETATM 30 O O13 HZ7 . . . I 2 114.322 156.676 179.792 1 138.92 ? O13 HZ7 801 C 1 
HETATM 31 O O14 HZ7 . . . I 2 113.861 156.89 177.372 1 138.92 ? O14 HZ7 801 C 1 
HETATM 32 O O15 HZ7 . . . I 2 115.503 155.205 178.209 1 138.92 ? O15 HZ7 801 C 1 
HETATM 33 O O16 HZ7 . . . I 2 110.688 158.018 181.096 1 138.92 ? O16 HZ7 801 C 1 
HETATM 34 O O17 HZ7 . . . I 2 111.668 158.934 183.759 1 138.92 ? O17 HZ7 801 C 1 
HETATM 35 O O18 HZ7 . . . I 2 109.891 159.983 182.609 1 138.92 ? O18 HZ7 801 C 1 
HETATM 36 O O19 HZ7 . . . I 2 110.701 156.72 179.169 1 138.92 ? O19 HZ7 801 C 1 
HETATM 37 O O2 HZ7 . . . I 2 120.83 158.059 179.495 1 138.92 ? O2 HZ7 801 C 1 
HETATM 38 O O3 HZ7 . . . I 2 117.255 159.045 182.655 1 138.92 ? O3 HZ7 801 C 1 
HETATM 39 O O4 HZ7 . . . I 2 116.098 157.639 178.264 1 138.92 ? O4 HZ7 801 C 1 
HETATM 40 O O5 HZ7 . . . I 2 118.767 156.719 177.814 1 138.92 ? O5 HZ7 801 C 1 
HETATM 41 O O6 HZ7 . . . I 2 115.43 158.848 180.589 1 138.92 ? O6 HZ7 801 C 1 
HETATM 42 O O7 HZ7 . . . I 2 116.712 157.133 184.238 1 138.92 ? O7 HZ7 801 C 1 
HETATM 43 O O8 HZ7 . . . I 2 114.832 158.157 182.797 1 138.92 ? O8 HZ7 801 C 1 
HETATM 44 O O9 HZ7 . . . I 2 115.876 159.423 184.744 1 138.92 ? O9 HZ7 801 C 1 
HETATM 45 P P1 HZ7 . . . I 2 116.165 158.421 183.66 1 138.92 ? P1 HZ7 801 C 1 
HETATM 46 P P2 HZ7 . . . I 2 121.238 159.274 178.517 1 138.92 ? P2 HZ7 801 C 1 
HETATM 47 P P3 HZ7 . . . I 2 114.909 156.575 178.405 1 138.92 ? P3 HZ7 801 C 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    46 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           47 
#