data_6E8Q # _model_server_result.job_id o0RokPd9mFULdMXPRLZ1aQ _model_server_result.datetime_utc '2024-10-13 07:26:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6e8q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":604}' # _entry.id 6E8Q # _exptl.entry_id 6E8Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.47 _cell.angle_gamma 90 _cell.entry_id 6E8Q _cell.length_a 77.35 _cell.length_b 66.56 _cell.length_c 80.77 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6E8Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 470 A CYS 470 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C NBD X2N . A X2N 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 313 n n C1B O1B LMT sing 314 n n C1B O5B LMT sing 315 n n C1B H1B LMT sing 316 n n C2B C3B LMT sing 317 n n C2B O2B LMT sing 318 n n C2B H2B LMT sing 319 n n C3B C4B LMT sing 320 n n C3B O3B LMT sing 321 n n C3B H3B LMT sing 322 n n C4B C5B LMT sing 323 n n C4B O4' LMT sing 324 n n C4B H4B LMT sing 325 n n C5B C6B LMT sing 326 n n C5B O5B LMT sing 327 n n C5B H5B LMT sing 328 n n C6B O6B LMT sing 329 n n C6B "H6'2" LMT sing 330 n n C6B "H6'1" LMT sing 331 n n O1B C4' LMT sing 332 n n O2B H2O1 LMT sing 333 n n O3B H3O1 LMT sing 334 n n O4' H4O1 LMT sing 335 n n O6B H6B LMT sing 336 n n C1' C2' LMT sing 337 n n C1' O1' LMT sing 338 n n C1' O5' LMT sing 339 n n C1' H1' LMT sing 340 n n C2' C3' LMT sing 341 n n C2' O2' LMT sing 342 n n C2' H2' LMT sing 343 n n C3' C4' LMT sing 344 n n C3' O3' LMT sing 345 n n C3' H3' LMT sing 346 n n C4' C5' LMT sing 347 n n C4' H4' LMT sing 348 n n C5' C6' LMT sing 349 n n C5' O5' LMT sing 350 n n C5' H5' LMT sing 351 n n C6' O6' LMT sing 352 n n C6' H6D LMT sing 353 n n C6' H6E LMT sing 354 n n O1' C1 LMT sing 355 n n O2' H2O2 LMT sing 356 n n O3' H3O2 LMT sing 357 n n O6' H6' LMT sing 358 n n C1 C2 LMT sing 359 n n C1 H12 LMT sing 360 n n C1 H11 LMT sing 361 n n C2 C3 LMT sing 362 n n C2 H22 LMT sing 363 n n C2 H21 LMT sing 364 n n C3 C4 LMT sing 365 n n C3 H32 LMT sing 366 n n C3 H31 LMT sing 367 n n C4 C5 LMT sing 368 n n C4 H42 LMT sing 369 n n C4 H41 LMT sing 370 n n C5 C6 LMT sing 371 n n C5 H52 LMT sing 372 n n C5 H51 LMT sing 373 n n C6 C7 LMT sing 374 n n C6 H62 LMT sing 375 n n C6 H61 LMT sing 376 n n C7 C8 LMT sing 377 n n C7 H72 LMT sing 378 n n C7 H71 LMT sing 379 n n C8 C9 LMT sing 380 n n C8 H82 LMT sing 381 n n C8 H81 LMT sing 382 n n C9 C10 LMT sing 383 n n C9 H92 LMT sing 384 n n C9 H91 LMT sing 385 n n C10 C11 LMT sing 386 n n C10 H102 LMT sing 387 n n C10 H101 LMT sing 388 n n C11 C12 LMT sing 389 n n C11 H112 LMT sing 390 n n C11 H111 LMT sing 391 n n C12 H123 LMT sing 392 n n C12 H122 LMT sing 393 n n C12 H121 LMT sing 394 n n # _atom_sites.entry_id 6E8Q _atom_sites.fract_transf_matrix[1][1] 0.012928 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001925 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015024 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012517 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 601 HEM HEM . C 3 X2N A 1 602 602 X2N X2N . D 4 1PE A 1 603 603 1PE 1PE . E 5 LMT A 1 604 1 LMT LMT . F 6 HOH A 1 701 135 HOH HOH . F 6 HOH A 2 702 162 HOH HOH . F 6 HOH A 3 703 96 HOH HOH . F 6 HOH A 4 704 129 HOH HOH . F 6 HOH A 5 705 62 HOH HOH . F 6 HOH A 6 706 164 HOH HOH . F 6 HOH A 7 707 22 HOH HOH . F 6 HOH A 8 708 175 HOH HOH . F 6 HOH A 9 709 64 HOH HOH . F 6 HOH A 10 710 121 HOH HOH . F 6 HOH A 11 711 143 HOH HOH . F 6 HOH A 12 712 11 HOH HOH . F 6 HOH A 13 713 46 HOH HOH . F 6 HOH A 14 714 15 HOH HOH . F 6 HOH A 15 715 30 HOH HOH . F 6 HOH A 16 716 99 HOH HOH . F 6 HOH A 17 717 57 HOH HOH . F 6 HOH A 18 718 5 HOH HOH . F 6 HOH A 19 719 111 HOH HOH . F 6 HOH A 20 720 176 HOH HOH . F 6 HOH A 21 721 29 HOH HOH . F 6 HOH A 22 722 6 HOH HOH . F 6 HOH A 23 723 177 HOH HOH . F 6 HOH A 24 724 127 HOH HOH . F 6 HOH A 25 725 26 HOH HOH . F 6 HOH A 26 726 172 HOH HOH . F 6 HOH A 27 727 140 HOH HOH . F 6 HOH A 28 728 14 HOH HOH . F 6 HOH A 29 729 51 HOH HOH . F 6 HOH A 30 730 174 HOH HOH . F 6 HOH A 31 731 66 HOH HOH . F 6 HOH A 32 732 3 HOH HOH . F 6 HOH A 33 733 13 HOH HOH . F 6 HOH A 34 734 28 HOH HOH . F 6 HOH A 35 735 38 HOH HOH . F 6 HOH A 36 736 8 HOH HOH . F 6 HOH A 37 737 2 HOH HOH . F 6 HOH A 38 738 156 HOH HOH . F 6 HOH A 39 739 85 HOH HOH . F 6 HOH A 40 740 165 HOH HOH . F 6 HOH A 41 741 31 HOH HOH . F 6 HOH A 42 742 137 HOH HOH . F 6 HOH A 43 743 35 HOH HOH . F 6 HOH A 44 744 18 HOH HOH . F 6 HOH A 45 745 7 HOH HOH . F 6 HOH A 46 746 163 HOH HOH . F 6 HOH A 47 747 70 HOH HOH . F 6 HOH A 48 748 12 HOH HOH . F 6 HOH A 49 749 132 HOH HOH . F 6 HOH A 50 750 37 HOH HOH . F 6 HOH A 51 751 113 HOH HOH . F 6 HOH A 52 752 134 HOH HOH . F 6 HOH A 53 753 178 HOH HOH . F 6 HOH A 54 754 68 HOH HOH . F 6 HOH A 55 755 97 HOH HOH . F 6 HOH A 56 756 32 HOH HOH . F 6 HOH A 57 757 80 HOH HOH . F 6 HOH A 58 758 110 HOH HOH . F 6 HOH A 59 759 76 HOH HOH . F 6 HOH A 60 760 61 HOH HOH . F 6 HOH A 61 761 171 HOH HOH . F 6 HOH A 62 762 155 HOH HOH . F 6 HOH A 63 763 71 HOH HOH . F 6 HOH A 64 764 47 HOH HOH . F 6 HOH A 65 765 59 HOH HOH . F 6 HOH A 66 766 63 HOH HOH . F 6 HOH A 67 767 45 HOH HOH . F 6 HOH A 68 768 161 HOH HOH . F 6 HOH A 69 769 94 HOH HOH . F 6 HOH A 70 770 158 HOH HOH . F 6 HOH A 71 771 89 HOH HOH . F 6 HOH A 72 772 146 HOH HOH . F 6 HOH A 73 773 42 HOH HOH . F 6 HOH A 74 774 27 HOH HOH . F 6 HOH A 75 775 48 HOH HOH . F 6 HOH A 76 776 79 HOH HOH . F 6 HOH A 77 777 69 HOH HOH . F 6 HOH A 78 778 101 HOH HOH . F 6 HOH A 79 779 41 HOH HOH . F 6 HOH A 80 780 108 HOH HOH . F 6 HOH A 81 781 49 HOH HOH . F 6 HOH A 82 782 88 HOH HOH . F 6 HOH A 83 783 72 HOH HOH . F 6 HOH A 84 784 93 HOH HOH . F 6 HOH A 85 785 23 HOH HOH . F 6 HOH A 86 786 67 HOH HOH . F 6 HOH A 87 787 43 HOH HOH . F 6 HOH A 88 788 159 HOH HOH . F 6 HOH A 89 789 81 HOH HOH . F 6 HOH A 90 790 34 HOH HOH . F 6 HOH A 91 791 56 HOH HOH . F 6 HOH A 92 792 117 HOH HOH . F 6 HOH A 93 793 160 HOH HOH . F 6 HOH A 94 794 25 HOH HOH . F 6 HOH A 95 795 169 HOH HOH . F 6 HOH A 96 796 130 HOH HOH . F 6 HOH A 97 797 170 HOH HOH . F 6 HOH A 98 798 179 HOH HOH . F 6 HOH A 99 799 148 HOH HOH . F 6 HOH A 100 800 92 HOH HOH . F 6 HOH A 101 801 180 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . E 5 45.444 14.721 11.151 1 57.7 ? C1B LMT 604 A 1 HETATM 2 C C2B LMT . . . E 5 44.858 13.651 10.205 1 57.2 ? C2B LMT 604 A 1 HETATM 3 C C3B LMT . . . E 5 44.432 14.278 8.879 1 50.78 ? C3B LMT 604 A 1 HETATM 4 C C4B LMT . . . E 5 43.47 15.437 9.133 1 50.39 ? C4B LMT 604 A 1 HETATM 5 C C5B LMT . . . E 5 44.055 16.41 10.161 1 52.19 ? C5B LMT 604 A 1 HETATM 6 C C6B LMT . . . E 5 43.078 17.546 10.458 1 44.79 ? C6B LMT 604 A 1 HETATM 7 O O1B LMT . . . E 5 46.614 15.368 10.614 1 64.6 ? O1B LMT 604 A 1 HETATM 8 O O2B LMT . . . E 5 45.748 12.548 9.94 1 61.2 ? O2B LMT 604 A 1 HETATM 9 O O3B LMT . . . E 5 43.797 13.277 8.078 1 49.41 ? O3B LMT 604 A 1 HETATM 10 O O4' LMT . . . E 5 43.196 16.124 7.903 1 43.8 ? O4' LMT 604 A 1 HETATM 11 O O5B LMT . . . E 5 44.428 15.716 11.364 1 53.4 ? O5B LMT 604 A 1 HETATM 12 O O6B LMT . . . E 5 41.774 16.997 10.711 1 45.22 ? O6B LMT 604 A 1 HETATM 13 C C1' LMT . . . E 5 50.59 16.097 11.709 1 69.9 ? C1' LMT 604 A 1 HETATM 14 C C2' LMT . . . E 5 50.143 14.64 11.637 1 69.84 ? C2' LMT 604 A 1 HETATM 15 C C3' LMT . . . E 5 48.851 14.546 10.831 1 67.6 ? C3' LMT 604 A 1 HETATM 16 C C4' LMT . . . E 5 47.772 15.422 11.458 1 61.93 ? C4' LMT 604 A 1 HETATM 17 C C5' LMT . . . E 5 48.324 16.846 11.571 1 56.9 ? C5' LMT 604 A 1 HETATM 18 C C6' LMT . . . E 5 47.276 17.775 12.182 1 55.64 ? C6' LMT 604 A 1 HETATM 19 O O1' LMT . . . E 5 51.912 16.15 12.294 1 71.76 ? O1' LMT 604 A 1 HETATM 20 O O2' LMT . . . E 5 51.161 13.859 11.001 1 78.63 ? O2' LMT 604 A 1 HETATM 21 O O3' LMT . . . E 5 48.394 13.189 10.74 1 64.23 ? O3' LMT 604 A 1 HETATM 22 O O5' LMT . . . E 5 49.544 16.856 12.343 1 65.05 ? O5' LMT 604 A 1 HETATM 23 O O6' LMT . . . E 5 47.104 18.963 11.399 1 59.55 ? O6' LMT 604 A 1 HETATM 24 C C1 LMT . . . E 5 52.071 16.302 13.708 1 66.42 ? C1 LMT 604 A 1 HETATM 25 C C2 LMT . . . E 5 53.438 15.728 14.105 1 67.67 ? C2 LMT 604 A 1 HETATM 26 C C3 LMT . . . E 5 54.399 16.76 14.703 1 72.29 ? C3 LMT 604 A 1 HETATM 27 C C4 LMT . . . E 5 55.862 16.335 14.535 1 77.09 ? C4 LMT 604 A 1 HETATM 28 C C5 LMT . . . E 5 56.811 17.042 15.509 1 81.52 ? C5 LMT 604 A 1 HETATM 29 C C6 LMT . . . E 5 58.268 16.601 15.325 1 79.66 ? C6 LMT 604 A 1 HETATM 30 C C7 LMT . . . E 5 59.197 17.192 16.388 1 83.38 ? C7 LMT 604 A 1 HETATM 31 C C8 LMT . . . E 5 60.666 16.846 16.134 1 83.53 ? C8 LMT 604 A 1 HETATM 32 C C9 LMT . . . E 5 61.593 17.384 17.226 1 77.43 ? C9 LMT 604 A 1 HETATM 33 C C10 LMT . . . E 5 63.061 17.107 16.903 1 76.18 ? C10 LMT 604 A 1 HETATM 34 C C11 LMT . . . E 5 63.895 16.903 18.169 1 77.79 ? C11 LMT 604 A 1 HETATM 35 C C12 LMT . . . E 5 65.186 16.157 17.886 1 70.92 ? C12 LMT 604 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #