data_6EAI
#
_model_server_result.job_id            5ngX3jciK3E2CaQZhZwkaQ 
_model_server_result.datetime_utc      '2024-10-17 22:04:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6eai 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":601}' 
#
_entry.id    6EAI 
#
_exptl.entry_id    6EAI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6EAI 
_cell.length_a            167.319 
_cell.length_b            167.319 
_cell.length_c            174.43 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6EAI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 J N N 
? 2 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 37 A CYS 37 1_555 A SG CYS 439 A CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 A SG CYS 155 A CYS 155 1_555 A SG CYS 290 A CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 A SG CYS 313 A CYS 313 1_555 A SG CYS 343 A CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 A SG CYS 322 A CYS 322 1_555 A SG CYS 333 A CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf5 A SG CYS 358 A CYS 358 1_555 A SG CYS 367 A CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf6 A SG CYS 382 A CYS 382 1_555 A SG CYS 393 A CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 A SG CYS 416 A CYS 416 1_555 A SG CYS 422 A CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf8 B SG CYS 37 B CYS 37 1_555 B SG CYS 439 B CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf9 B SG CYS 155 B CYS 155 1_555 B SG CYS 290 B CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf10 B SG CYS 313 B CYS 313 1_555 B SG CYS 343 B CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf11 B SG CYS 322 B CYS 322 1_555 B SG CYS 333 B CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf12 B SG CYS 358 B CYS 358 1_555 B SG CYS 367 B CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf13 B SG CYS 382 B CYS 382 1_555 B SG CYS 393 B CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf14 B SG CYS 416 B CYS 416 1_555 B SG CYS 422 B CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf15 C SG CYS 37 C CYS 37 1_555 C SG CYS 439 C CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf16 C SG CYS 155 C CYS 155 1_555 C SG CYS 290 C CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf17 C SG CYS 313 C CYS 313 1_555 C SG CYS 343 C CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf18 C SG CYS 322 C CYS 322 1_555 C SG CYS 333 C CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf19 C SG CYS 358 C CYS 358 1_555 C SG CYS 367 C CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf20 C SG CYS 382 C CYS 382 1_555 C SG CYS 393 C CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf21 C SG CYS 416 C CYS 416 1_555 C SG CYS 422 C CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
covale ? covale1 A ND2 ASN 500 A ASN 500 1_555 D C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale2 B NH2 ARG 429 B ARG 429 1_555 Q O2 TAR . B TAR 608 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.298 ? 
covale ? covale3 B ND2 ASN 500 B ASN 500 1_555 J C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale4 C ND2 ASN 500 C ASN 500 1_555 R C1 NAG . C NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     6EAI 
_atom_sites.fract_transf_matrix[1][1]    0.005977 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005977 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005733 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 NAG A 1 601 600 NAG NAG . 
E 3 SO4 A 1 602 2 SO4 SO4 . 
F 3 SO4 A 1 603 5 SO4 SO4 . 
G 3 SO4 A 1 604 9 SO4 SO4 . 
H 4 NHE A 1 605 2 NHE NHE . 
I 4 NHE A 1 606 6 NHE NHE . 
J 2 NAG B 1 601 600 NAG NAG . 
K 3 SO4 B 1 602 3 SO4 SO4 . 
L 3 SO4 B 1 603 6 SO4 SO4 . 
M 3 SO4 B 1 604 7 SO4 SO4 . 
N 3 SO4 B 1 605 10 SO4 SO4 . 
O 4 NHE B 1 606 3 NHE NHE . 
P 4 NHE B 1 607 4 NHE NHE . 
Q 5 TAR B 1 608 1 TAR TAR . 
R 2 NAG C 1 601 600 NAG NAG . 
S 3 SO4 C 1 602 1 SO4 SO4 . 
T 3 SO4 C 1 603 4 SO4 SO4 . 
U 3 SO4 C 1 604 8 SO4 SO4 . 
V 3 SO4 C 1 605 11 SO4 SO4 . 
W 4 NHE C 1 606 1 NHE NHE . 
X 4 NHE C 1 607 5 NHE NHE . 
Y 5 TAR C 1 608 2 TAR TAR . 
Z 6 HOH A 1 701 8 HOH HOH . 
Z 6 HOH A 2 702 10 HOH HOH . 
Z 6 HOH A 3 703 2 HOH HOH . 
Z 6 HOH A 4 704 5 HOH HOH . 
Z 6 HOH A 5 705 4 HOH HOH . 
AA 6 HOH B 1 701 18 HOH HOH . 
AA 6 HOH B 2 702 13 HOH HOH . 
AA 6 HOH B 3 703 9 HOH HOH . 
AA 6 HOH B 4 704 16 HOH HOH . 
AA 6 HOH B 5 705 7 HOH HOH . 
AA 6 HOH B 6 706 1 HOH HOH . 
AA 6 HOH B 7 707 17 HOH HOH . 
AA 6 HOH B 8 708 11 HOH HOH . 
AA 6 HOH B 9 709 14 HOH HOH . 
BA 6 HOH C 1 701 12 HOH HOH . 
BA 6 HOH C 2 702 15 HOH HOH . 
BA 6 HOH C 3 703 3 HOH HOH . 
BA 6 HOH C 4 704 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . J 2 -86.004 -27.476 2.928 1 125.94 ? C1 NAG 601 B 1 
HETATM 2 C C2 NAG . . . J 2 -87.311 -28.143 3.326 1 128.79 ? C2 NAG 601 B 1 
HETATM 3 C C3 NAG . . . J 2 -88.475 -27.451 2.634 1 132.2 ? C3 NAG 601 B 1 
HETATM 4 C C4 NAG . . . J 2 -88.455 -25.957 2.936 1 138.7 ? C4 NAG 601 B 1 
HETATM 5 C C5 NAG . . . J 2 -87.079 -25.353 2.638 1 132.51 ? C5 NAG 601 B 1 
HETATM 6 C C6 NAG . . . J 2 -86.949 -23.919 3.099 1 119.9 ? C6 NAG 601 B 1 
HETATM 7 C C7 NAG . . . J 2 -87.561 -30.515 3.908 1 137.92 ? C7 NAG 601 B 1 
HETATM 8 C C8 NAG . . . J 2 -87.496 -31.927 3.41 1 129.75 ? C8 NAG 601 B 1 
HETATM 9 N N2 NAG . . . J 2 -87.294 -29.562 3.008 1 135.29 ? N2 NAG 601 B 1 
HETATM 10 O O3 NAG . . . J 2 -89.698 -28.024 3.084 1 139.32 ? O3 NAG 601 B 1 
HETATM 11 O O4 NAG . . . J 2 -89.442 -25.29 2.157 1 129.49 ? O4 NAG 601 B 1 
HETATM 12 O O5 NAG . . . J 2 -86.039 -26.096 3.297 1 127.39 ? O5 NAG 601 B 1 
HETATM 13 O O6 NAG . . . J 2 -86.561 -23.843 4.464 1 116.78 ? O6 NAG 601 B 1 
HETATM 14 O O7 NAG . . . J 2 -87.843 -30.249 5.073 1 135.26 ? O7 NAG 601 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           35 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#