data_6EAI # _model_server_result.job_id vhWemfUOjarCNSRl-hbTYg _model_server_result.datetime_utc '2024-12-28 01:06:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eai # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":608}' # _entry.id 6EAI # _exptl.entry_id 6EAI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'D(-)-TARTARIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EAI _cell.length_a 167.319 _cell.length_b 167.319 _cell.length_c 174.43 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EAI _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 Q N N ? 5 Y N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 37 A CYS 37 1_555 A SG CYS 439 A CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 155 A CYS 155 1_555 A SG CYS 290 A CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 313 A CYS 313 1_555 A SG CYS 343 A CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 A SG CYS 322 A CYS 322 1_555 A SG CYS 333 A CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 A SG CYS 358 A CYS 358 1_555 A SG CYS 367 A CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf6 A SG CYS 382 A CYS 382 1_555 A SG CYS 393 A CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf7 A SG CYS 416 A CYS 416 1_555 A SG CYS 422 A CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf8 B SG CYS 37 B CYS 37 1_555 B SG CYS 439 B CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf9 B SG CYS 155 B CYS 155 1_555 B SG CYS 290 B CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 B SG CYS 313 B CYS 313 1_555 B SG CYS 343 B CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf11 B SG CYS 322 B CYS 322 1_555 B SG CYS 333 B CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf12 B SG CYS 358 B CYS 358 1_555 B SG CYS 367 B CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf13 B SG CYS 382 B CYS 382 1_555 B SG CYS 393 B CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf14 B SG CYS 416 B CYS 416 1_555 B SG CYS 422 B CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf15 C SG CYS 37 C CYS 37 1_555 C SG CYS 439 C CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf16 C SG CYS 155 C CYS 155 1_555 C SG CYS 290 C CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf17 C SG CYS 313 C CYS 313 1_555 C SG CYS 343 C CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf18 C SG CYS 322 C CYS 322 1_555 C SG CYS 333 C CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf19 C SG CYS 358 C CYS 358 1_555 C SG CYS 367 C CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf20 C SG CYS 382 C CYS 382 1_555 C SG CYS 393 C CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf21 C SG CYS 416 C CYS 416 1_555 C SG CYS 422 C CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? covale ? covale1 A ND2 ASN 500 A ASN 500 1_555 D C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 B ND2 ASN 500 B ASN 500 1_555 J C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale3 C ND2 ASN 500 C ASN 500 1_555 R C1 NAG . C NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TAR _chem_comp.mon_nstd_flag . _chem_comp.name 'D(-)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TAR doub 354 n n O11 C1 TAR sing 355 n n O11 HO1 TAR sing 356 n n C1 C2 TAR sing 357 n n C2 O2 TAR sing 358 n n C2 C3 TAR sing 359 n n C2 H2 TAR sing 360 n n O2 HO2 TAR sing 361 n n C3 O3 TAR sing 362 n n C3 C4 TAR sing 363 n n C3 H3 TAR sing 364 n n O3 HO3 TAR sing 365 n n C4 O4 TAR doub 366 n n C4 O41 TAR sing 367 n n O41 HO4 TAR sing 368 n n # _atom_sites.entry_id 6EAI _atom_sites.fract_transf_matrix[1][1] 0.005977 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005733 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 NAG A 1 601 600 NAG NAG . E 3 SO4 A 1 602 2 SO4 SO4 . F 3 SO4 A 1 603 5 SO4 SO4 . G 3 SO4 A 1 604 9 SO4 SO4 . H 4 NHE A 1 605 2 NHE NHE . I 4 NHE A 1 606 6 NHE NHE . J 2 NAG B 1 601 600 NAG NAG . K 3 SO4 B 1 602 3 SO4 SO4 . L 3 SO4 B 1 603 6 SO4 SO4 . M 3 SO4 B 1 604 7 SO4 SO4 . N 3 SO4 B 1 605 10 SO4 SO4 . O 4 NHE B 1 606 3 NHE NHE . P 4 NHE B 1 607 4 NHE NHE . Q 5 TAR B 1 608 1 TAR TAR . R 2 NAG C 1 601 600 NAG NAG . S 3 SO4 C 1 602 1 SO4 SO4 . T 3 SO4 C 1 603 4 SO4 SO4 . U 3 SO4 C 1 604 8 SO4 SO4 . V 3 SO4 C 1 605 11 SO4 SO4 . W 4 NHE C 1 606 1 NHE NHE . X 4 NHE C 1 607 5 NHE NHE . Y 5 TAR C 1 608 2 TAR TAR . Z 6 HOH A 1 701 8 HOH HOH . Z 6 HOH A 2 702 10 HOH HOH . Z 6 HOH A 3 703 2 HOH HOH . Z 6 HOH A 4 704 5 HOH HOH . Z 6 HOH A 5 705 4 HOH HOH . AA 6 HOH B 1 701 18 HOH HOH . AA 6 HOH B 2 702 13 HOH HOH . AA 6 HOH B 3 703 9 HOH HOH . AA 6 HOH B 4 704 16 HOH HOH . AA 6 HOH B 5 705 7 HOH HOH . AA 6 HOH B 6 706 1 HOH HOH . AA 6 HOH B 7 707 17 HOH HOH . AA 6 HOH B 8 708 11 HOH HOH . AA 6 HOH B 9 709 14 HOH HOH . BA 6 HOH C 1 701 12 HOH HOH . BA 6 HOH C 2 702 15 HOH HOH . BA 6 HOH C 3 703 3 HOH HOH . BA 6 HOH C 4 704 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TAR . . . Y 5 -59.116 -25.617 -42.694 1 107.98 ? O1 TAR 608 C 1 HETATM 2 O O11 TAR . . . Y 5 -58.288 -24.49 -41.021 1 115.84 ? O11 TAR 608 C 1 HETATM 3 C C1 TAR . . . Y 5 -58.172 -25.393 -41.891 1 113.86 ? C1 TAR 608 C 1 HETATM 4 C C2 TAR . . . Y 5 -56.896 -26.202 -41.974 1 105.13 ? C2 TAR 608 C 1 HETATM 5 O O2 TAR . . . Y 5 -56.163 -26.058 -40.778 1 110.01 ? O2 TAR 608 C 1 HETATM 6 C C3 TAR . . . Y 5 -57.224 -27.661 -42.209 1 93.37 ? C3 TAR 608 C 1 HETATM 7 O O3 TAR . . . Y 5 -58.498 -27.768 -42.794 1 93.03 ? O3 TAR 608 C 1 HETATM 8 C C4 TAR . . . Y 5 -57.203 -28.434 -40.91 1 97.13 ? C4 TAR 608 C 1 HETATM 9 O O4 TAR . . . Y 5 -56.797 -29.625 -40.901 1 93.49 ? O4 TAR 608 C 1 HETATM 10 O O41 TAR . . . Y 5 -57.59 -27.891 -39.842 1 112.98 ? O41 TAR 608 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #