data_6EBR
#
_model_server_result.job_id            PDbx7Qk-Al4ebJkD3pkhUQ 
_model_server_result.datetime_utc      '2024-10-19 14:18:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ebr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    6EBR 
#
_exptl.entry_id    6EBR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              66.007 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'BERYLLIUM TRIFLUORIDE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6EBR 
_cell.length_a            74.705 
_cell.length_b            93.404 
_cell.length_c            37.611 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6EBR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 9 A ASP 9 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc2 A OD1 ASP 52 A ASP 52 1_555 B BE BEF . A BEF 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
metalc ? metalc3 A OD2 ASP 52 A ASP 52 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? 
metalc ? metalc4 A O MET 54 A MET 54 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc5 B F2 BEF . A BEF 201 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? 
metalc ? metalc6 C MN MN . A MN 202 1_555 D O HOH . A HOH 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc7 C MN MN . A MN 202 1_555 D O HOH . A HOH 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
#
_chem_comp.formula           'Be F3 -1' 
_chem_comp.formula_weight    66.007 
_chem_comp.id                BEF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'BERYLLIUM TRIFLUORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
BE F1 BEF sing 70 n n 
BE F2 BEF sing 71 n n 
BE F3 BEF sing 72 n n 
#
_atom_sites.entry_id                     6EBR 
_atom_sites.fract_transf_matrix[1][1]    0.013386 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010706 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026588 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BEF A 1 201 131 BEF BEF . 
C 3 MN A 1 202 1 MN MN . 
D 4 HOH A 1 301 57 HOH HOH . 
D 4 HOH A 2 302 97 HOH HOH . 
D 4 HOH A 3 303 79 HOH HOH . 
D 4 HOH A 4 304 106 HOH HOH . 
D 4 HOH A 5 305 56 HOH HOH . 
D 4 HOH A 6 306 39 HOH HOH . 
D 4 HOH A 7 307 55 HOH HOH . 
D 4 HOH A 8 308 49 HOH HOH . 
D 4 HOH A 9 309 101 HOH HOH . 
D 4 HOH A 10 310 33 HOH HOH . 
D 4 HOH A 11 311 120 HOH HOH . 
D 4 HOH A 12 312 45 HOH HOH . 
D 4 HOH A 13 313 27 HOH HOH . 
D 4 HOH A 14 314 62 HOH HOH . 
D 4 HOH A 15 315 78 HOH HOH . 
D 4 HOH A 16 316 24 HOH HOH . 
D 4 HOH A 17 317 40 HOH HOH . 
D 4 HOH A 18 318 126 HOH HOH . 
D 4 HOH A 19 319 19 HOH HOH . 
D 4 HOH A 20 320 22 HOH HOH . 
D 4 HOH A 21 321 16 HOH HOH . 
D 4 HOH A 22 322 88 HOH HOH . 
D 4 HOH A 23 323 107 HOH HOH . 
D 4 HOH A 24 324 5 HOH HOH . 
D 4 HOH A 25 325 98 HOH HOH . 
D 4 HOH A 26 326 28 HOH HOH . 
D 4 HOH A 27 327 42 HOH HOH . 
D 4 HOH A 28 328 25 HOH HOH . 
D 4 HOH A 29 329 29 HOH HOH . 
D 4 HOH A 30 330 26 HOH HOH . 
D 4 HOH A 31 331 3 HOH HOH . 
D 4 HOH A 32 332 95 HOH HOH . 
D 4 HOH A 33 333 12 HOH HOH . 
D 4 HOH A 34 334 83 HOH HOH . 
D 4 HOH A 35 335 17 HOH HOH . 
D 4 HOH A 36 336 10 HOH HOH . 
D 4 HOH A 37 337 9 HOH HOH . 
D 4 HOH A 38 338 85 HOH HOH . 
D 4 HOH A 39 339 7 HOH HOH . 
D 4 HOH A 40 340 2 HOH HOH . 
D 4 HOH A 41 341 65 HOH HOH . 
D 4 HOH A 42 342 123 HOH HOH . 
D 4 HOH A 43 343 18 HOH HOH . 
D 4 HOH A 44 344 68 HOH HOH . 
D 4 HOH A 45 345 58 HOH HOH . 
D 4 HOH A 46 346 15 HOH HOH . 
D 4 HOH A 47 347 13 HOH HOH . 
D 4 HOH A 48 348 21 HOH HOH . 
D 4 HOH A 49 349 14 HOH HOH . 
D 4 HOH A 50 350 32 HOH HOH . 
D 4 HOH A 51 351 129 HOH HOH . 
D 4 HOH A 52 352 90 HOH HOH . 
D 4 HOH A 53 353 6 HOH HOH . 
D 4 HOH A 54 354 30 HOH HOH . 
D 4 HOH A 55 355 66 HOH HOH . 
D 4 HOH A 56 356 73 HOH HOH . 
D 4 HOH A 57 357 46 HOH HOH . 
D 4 HOH A 58 358 132 HOH HOH . 
D 4 HOH A 59 359 96 HOH HOH . 
D 4 HOH A 60 360 115 HOH HOH . 
D 4 HOH A 61 361 84 HOH HOH . 
D 4 HOH A 62 362 11 HOH HOH . 
D 4 HOH A 63 363 47 HOH HOH . 
D 4 HOH A 64 364 82 HOH HOH . 
D 4 HOH A 65 365 52 HOH HOH . 
D 4 HOH A 66 366 43 HOH HOH . 
D 4 HOH A 67 367 31 HOH HOH . 
D 4 HOH A 68 368 116 HOH HOH . 
D 4 HOH A 69 369 61 HOH HOH . 
D 4 HOH A 70 370 59 HOH HOH . 
D 4 HOH A 71 371 69 HOH HOH . 
D 4 HOH A 72 372 1 HOH HOH . 
D 4 HOH A 73 373 63 HOH HOH . 
D 4 HOH A 74 374 81 HOH HOH . 
D 4 HOH A 75 375 109 HOH HOH . 
D 4 HOH A 76 376 36 HOH HOH . 
D 4 HOH A 77 377 41 HOH HOH . 
D 4 HOH A 78 378 72 HOH HOH . 
D 4 HOH A 79 379 38 HOH HOH . 
D 4 HOH A 80 380 34 HOH HOH . 
D 4 HOH A 81 381 54 HOH HOH . 
D 4 HOH A 82 382 118 HOH HOH . 
D 4 HOH A 83 383 119 HOH HOH . 
D 4 HOH A 84 384 37 HOH HOH . 
D 4 HOH A 85 385 20 HOH HOH . 
D 4 HOH A 86 386 4 HOH HOH . 
D 4 HOH A 87 387 86 HOH HOH . 
D 4 HOH A 88 388 51 HOH HOH . 
D 4 HOH A 89 389 44 HOH HOH . 
D 4 HOH A 90 390 71 HOH HOH . 
D 4 HOH A 91 391 125 HOH HOH . 
D 4 HOH A 92 392 48 HOH HOH . 
D 4 HOH A 93 393 104 HOH HOH . 
D 4 HOH A 94 394 100 HOH HOH . 
D 4 HOH A 95 395 8 HOH HOH . 
D 4 HOH A 96 396 60 HOH HOH . 
D 4 HOH A 97 397 67 HOH HOH . 
D 4 HOH A 98 398 87 HOH HOH . 
D 4 HOH A 99 399 74 HOH HOH . 
D 4 HOH A 100 400 89 HOH HOH . 
D 4 HOH A 101 401 117 HOH HOH . 
D 4 HOH A 102 402 35 HOH HOH . 
D 4 HOH A 103 403 64 HOH HOH . 
D 4 HOH A 104 404 127 HOH HOH . 
D 4 HOH A 105 405 103 HOH HOH . 
D 4 HOH A 106 406 23 HOH HOH . 
D 4 HOH A 107 407 114 HOH HOH . 
D 4 HOH A 108 408 130 HOH HOH . 
D 4 HOH A 109 409 93 HOH HOH . 
D 4 HOH A 110 410 77 HOH HOH . 
D 4 HOH A 111 411 70 HOH HOH . 
D 4 HOH A 112 412 76 HOH HOH . 
D 4 HOH A 113 413 128 HOH HOH . 
D 4 HOH A 114 414 113 HOH HOH . 
D 4 HOH A 115 415 133 HOH HOH . 
D 4 HOH A 116 416 75 HOH HOH . 
D 4 HOH A 117 417 131 HOH HOH . 
D 4 HOH A 118 418 110 HOH HOH . 
D 4 HOH A 119 419 50 HOH HOH . 
D 4 HOH A 120 420 53 HOH HOH . 
D 4 HOH A 121 421 105 HOH HOH . 
D 4 HOH A 122 422 99 HOH HOH . 
D 4 HOH A 123 423 94 HOH HOH . 
D 4 HOH A 124 424 122 HOH HOH . 
D 4 HOH A 125 425 111 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 BE BE BEF . . . B 2 69.471 58.247 9.677 1 19.52 ? BE BEF 201 A 1 
HETATM 2 F F1 BEF . . . B 2 70.472 57.801 8.602 1 20.28 ? F1 BEF 201 A 1 
HETATM 3 F F2 BEF . . . B 2 70.262 59.189 10.643 1 21.6 ? F2 BEF 201 A 1 
HETATM 4 F F3 BEF . . . B 2 69.154 57.014 10.547 1 22.5 ? F3 BEF 201 A 1 
#
_model_server_stats.io_time_ms              72 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#