data_6EBV # _model_server_result.job_id v8GyQhUUMB3WS03biurdiw _model_server_result.datetime_utc '2024-11-22 18:17:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ebv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":302}' # _entry.id 6EBV # _exptl.entry_id 6EBV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 396.416 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-heptyl-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.81 _cell.angle_gamma 90 _cell.entry_id 6EBV _cell.length_a 72.8 _cell.length_b 56.72 _cell.length_c 133.62 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EBV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I,J,M,O 1 1 B,D,G,H,K,L,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C16 H33 N2 O7 P' _chem_comp.formula_weight 396.416 _chem_comp.id 27Q _chem_comp.mon_nstd_flag . _chem_comp.name N-heptyl-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAF PAX 27Q doub 1 n n OAI PAX 27Q sing 2 n n PAX OAH 27Q sing 3 n n PAX OAS 27Q sing 4 n n OAG CAV 27Q sing 5 n n CAV CAU 27Q sing 6 n n CAV CAW 27Q sing 7 n n OAS CAP 27Q sing 8 n n OAE CAU 27Q doub 9 n n CAU NAR 27Q sing 10 n n NAR CAN 27Q sing 11 n n CAN CAO 27Q sing 12 n n CAP CAW 27Q sing 13 n n CAW CAB 27Q sing 14 n n CAW CAC 27Q sing 15 n n OAD CAT 27Q doub 16 n n CAO CAT 27Q sing 17 n n CAT NAQ 27Q sing 18 n n NAQ CAM 27Q sing 19 n n CAM CAL 27Q sing 20 n n CAL CAK 27Q sing 21 n n CAK CAJ 27Q sing 22 n n CAJ CAA 27Q sing 23 n n CAA CAY 27Q sing 24 n n CAY CAZ 27Q sing 25 n n OAH H1 27Q sing 26 n n OAI H2 27Q sing 27 n n CAP H3 27Q sing 28 n n CAP H4 27Q sing 29 n n CAB H5 27Q sing 30 n n CAB H6 27Q sing 31 n n CAB H7 27Q sing 32 n n CAC H8 27Q sing 33 n n CAC H9 27Q sing 34 n n CAC H10 27Q sing 35 n n CAV H11 27Q sing 36 n n OAG H12 27Q sing 37 n n NAR H13 27Q sing 38 n n CAN H14 27Q sing 39 n n CAN H15 27Q sing 40 n n CAO H16 27Q sing 41 n n CAO H17 27Q sing 42 n n NAQ H18 27Q sing 43 n n CAM H19 27Q sing 44 n n CAM H20 27Q sing 45 n n CAL H21 27Q sing 46 n n CAL H22 27Q sing 47 n n CAK H23 27Q sing 48 n n CAK H24 27Q sing 49 n n CAJ H25 27Q sing 50 n n CAJ H26 27Q sing 51 n n CAA H27 27Q sing 52 n n CAA H28 27Q sing 53 n n CAY H29 27Q sing 54 n n CAY H30 27Q sing 55 n n CAZ H31 27Q sing 56 n n CAZ H32 27Q sing 57 n n CAZ H33 27Q sing 58 n n # _atom_sites.entry_id 6EBV _atom_sites.fract_transf_matrix[1][1] 0.013736 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002375 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01763 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007595 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ADP A 1 301 304 ADP ADP . F 3 27Q A 1 302 2 27Q NEW . G 2 ADP B 1 301 302 ADP ADP . H 3 27Q B 1 302 3 27Q NEW . I 2 ADP C 1 301 301 ADP ADP . J 3 27Q C 1 302 1 27Q NEW . K 2 ADP D 1 301 303 ADP ADP . L 3 27Q D 1 302 4 27Q NEW . M 4 HOH A 1 401 24 HOH HOH . M 4 HOH A 2 402 25 HOH HOH . M 4 HOH A 3 403 32 HOH HOH . M 4 HOH A 4 404 44 HOH HOH . M 4 HOH A 5 405 30 HOH HOH . M 4 HOH A 6 406 16 HOH HOH . M 4 HOH A 7 407 15 HOH HOH . N 4 HOH B 1 401 4 HOH HOH . N 4 HOH B 2 402 10 HOH HOH . N 4 HOH B 3 403 51 HOH HOH . N 4 HOH B 4 404 6 HOH HOH . N 4 HOH B 5 405 41 HOH HOH . N 4 HOH B 6 406 36 HOH HOH . N 4 HOH B 7 407 22 HOH HOH . N 4 HOH B 8 408 5 HOH HOH . N 4 HOH B 9 409 47 HOH HOH . N 4 HOH B 10 410 3 HOH HOH . N 4 HOH B 11 411 38 HOH HOH . N 4 HOH B 12 412 17 HOH HOH . N 4 HOH B 13 413 14 HOH HOH . N 4 HOH B 14 414 18 HOH HOH . O 4 HOH C 1 401 8 HOH HOH . O 4 HOH C 2 402 7 HOH HOH . O 4 HOH C 3 403 1 HOH HOH . O 4 HOH C 4 404 2 HOH HOH . O 4 HOH C 5 405 9 HOH HOH . O 4 HOH C 6 406 49 HOH HOH . O 4 HOH C 7 407 26 HOH HOH . O 4 HOH C 8 408 27 HOH HOH . P 4 HOH D 1 401 34 HOH HOH . P 4 HOH D 2 402 19 HOH HOH . P 4 HOH D 3 403 35 HOH HOH . P 4 HOH D 4 404 13 HOH HOH . P 4 HOH D 5 405 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAP 27Q . . . H 3 11.28 12.101 10.678 1 22.69 ? CAP 27Q 302 B 1 HETATM 2 C CAW 27Q . . . H 3 9.789 11.683 10.624 1 24.07 ? CAW 27Q 302 B 1 HETATM 3 C CAB 27Q . . . H 3 9.745 10.247 11.145 1 24.01 ? CAB 27Q 302 B 1 HETATM 4 C CAC 27Q . . . H 3 9.332 11.648 9.162 1 24.08 ? CAC 27Q 302 B 1 HETATM 5 C CAV 27Q . . . H 3 8.874 12.584 11.56 1 25.08 ? CAV 27Q 302 B 1 HETATM 6 O OAG 27Q . . . H 3 9.313 13.941 11.641 1 22.47 ? OAG 27Q 302 B 1 HETATM 7 C CAU 27Q . . . H 3 7.373 12.545 11.201 1 25.45 ? CAU 27Q 302 B 1 HETATM 8 O OAE 27Q . . . H 3 6.76 11.478 11.273 1 25.33 ? OAE 27Q 302 B 1 HETATM 9 N NAR 27Q . . . H 3 6.813 13.736 10.876 1 24.86 ? NAR 27Q 302 B 1 HETATM 10 C CAN 27Q . . . H 3 5.391 13.89 10.517 1 26.22 ? CAN 27Q 302 B 1 HETATM 11 C CAO 27Q . . . H 3 5.314 14.351 9.072 1 29.57 ? CAO 27Q 302 B 1 HETATM 12 C CAT 27Q . . . H 3 3.862 14.385 8.585 1 32.38 ? CAT 27Q 302 B 1 HETATM 13 O OAD 27Q . . . H 3 3.242 13.33 8.402 1 34.94 ? OAD 27Q 302 B 1 HETATM 14 N NAQ 27Q . . . H 3 3.385 15.622 8.314 1 31.42 ? NAQ 27Q 302 B 1 HETATM 15 C CAM 27Q . . . H 3 2.004 15.852 7.817 1 30.61 ? CAM 27Q 302 B 1 HETATM 16 C CAL 27Q . . . H 3 1.544 17.32 7.86 1 30.13 ? CAL 27Q 302 B 1 HETATM 17 C CAK 27Q . . . H 3 2.342 18.183 6.872 1 32.34 ? CAK 27Q 302 B 1 HETATM 18 C CAJ 27Q . . . H 3 1.628 18.287 5.512 1 34.42 ? CAJ 27Q 302 B 1 HETATM 19 C CAA 27Q . . . H 3 2.483 19.132 4.557 1 31.37 ? CAA 27Q 302 B 1 HETATM 20 C CAY 27Q . . . H 3 1.748 19.296 3.237 1 27.32 ? CAY 27Q 302 B 1 HETATM 21 C CAZ 27Q . . . H 3 2.728 18.924 2.14 1 27.01 ? CAZ 27Q 302 B 1 HETATM 22 H H12 27Q . . . H 3 9.468 14.319 10.729 1 22.5 ? H12 27Q 302 B 1 HETATM 23 H H13 27Q . . . H 3 7.316 14.601 10.867 1 24.45 ? H13 27Q 302 B 1 HETATM 24 H H18 27Q . . . H 3 3.946 16.44 8.461 1 31.61 ? H18 27Q 302 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #