data_6EDS
#
_model_server_result.job_id            QflyBZaIpvA7aqNjMlvTZg 
_model_server_result.datetime_utc      '2024-12-23 16:04:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6eds 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1102}' 
#
_entry.id    6EDS 
#
_exptl.entry_id    6EDS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6EDS 
_cell.length_a            263.119 
_cell.length_b            263.119 
_cell.length_c            90.322 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 6EDS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    'P 65' 
_symmetry.space_group_name_H-M     'P 65' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,H 1 1 
B,D,I,J,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 J N N 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 355 n n 
C1 C2 PEG sing 356 n n 
C1 H11 PEG sing 357 n n 
C1 H12 PEG sing 358 n n 
O1 HO1 PEG sing 359 n n 
C2 O2 PEG sing 360 n n 
C2 H21 PEG sing 361 n n 
C2 H22 PEG sing 362 n n 
O2 C3 PEG sing 363 n n 
C3 C4 PEG sing 364 n n 
C3 H31 PEG sing 365 n n 
C3 H32 PEG sing 366 n n 
C4 O4 PEG sing 367 n n 
C4 H41 PEG sing 368 n n 
C4 H42 PEG sing 369 n n 
O4 HO4 PEG sing 370 n n 
#
_atom_sites.entry_id                     6EDS 
_atom_sites.fract_transf_matrix[1][1]    0.003801 
_atom_sites.fract_transf_matrix[1][2]    0.002194 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004389 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011071 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 J22 A 1 1101 1 J22 J22 . 
F 4 EPE A 1 1102 1102 EPE EPE . 
G 5 PEG A 1 1103 1103 PEG PEG . 
H 6 DIO A 1 1104 1104 DIO DIO . 
I 4 EPE B 1 1101 1102 EPE EPE . 
J 5 PEG B 1 1102 1103 PEG PEG . 
K 6 DIO B 1 1103 1104 DIO DIO . 
L 3 J22 B 1 1104 1 J22 J22 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . J 5 48.003 -77.571 -3.671 0.93 102.23 ? C1 PEG 1102 B 1 
HETATM 2 O O1 PEG . . . J 5 47.155 -77.709 -4.781 0.93 103.11 ? O1 PEG 1102 B 1 
HETATM 3 C C2 PEG . . . J 5 48.629 -78.911 -3.29 0.93 98.84 ? C2 PEG 1102 B 1 
HETATM 4 O O2 PEG . . . J 5 47.632 -79.851 -3.019 0.93 93.13 ? O2 PEG 1102 B 1 
HETATM 5 C C3 PEG . . . J 5 48.102 -81.167 -3.052 0.93 86.61 ? C3 PEG 1102 B 1 
HETATM 6 C C4 PEG . . . J 5 47.136 -82.063 -2.285 0.93 83.57 ? C4 PEG 1102 B 1 
HETATM 7 O O4 PEG . . . J 5 47.78 -82.558 -1.143 0.93 82.47 ? O4 PEG 1102 B 1 
HETATM 8 H H11 PEG . . . J 5 48.707 -76.94 -3.884 0.93 122.67 ? H11 PEG 1102 B 1 
HETATM 9 H H12 PEG . . . J 5 47.49 -77.235 -2.919 0.93 122.67 ? H12 PEG 1102 B 1 
HETATM 10 H HO1 PEG . . . J 5 47.208 -77.013 -5.266 0.93 123.73 ? HO1 PEG 1102 B 1 
HETATM 11 H H21 PEG . . . J 5 49.178 -79.228 -4.024 0.93 118.61 ? H21 PEG 1102 B 1 
HETATM 12 H H22 PEG . . . J 5 49.183 -78.794 -2.502 0.93 118.61 ? H22 PEG 1102 B 1 
HETATM 13 H H31 PEG . . . J 5 48.161 -81.467 -3.973 0.93 103.93 ? H31 PEG 1102 B 1 
HETATM 14 H H32 PEG . . . J 5 48.979 -81.208 -2.641 0.93 103.93 ? H32 PEG 1102 B 1 
HETATM 15 H H41 PEG . . . J 5 46.357 -81.549 -2.021 0.93 100.29 ? H41 PEG 1102 B 1 
HETATM 16 H H42 PEG . . . J 5 46.862 -82.803 -2.849 0.93 100.29 ? H42 PEG 1102 B 1 
HETATM 17 H HO4 PEG . . . J 5 47.215 -82.96 -0.651 0.93 98.96 ? HO4 PEG 1102 B 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    33 
_model_server_stats.query_time_ms           479 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           17 
#