data_6EF6 # _model_server_result.job_id 6gZOT-svzwpXLC0uadpqng _model_server_result.datetime_utc '2025-01-01 04:40:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ef6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6EF6 # _exptl.entry_id 6EF6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.121 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BENZOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.12 _cell.angle_gamma 90 _cell.entry_id 6EF6 _cell.length_a 72.01 _cell.length_b 70.05 _cell.length_c 60.72 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EF6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLN 191 A GLN 171 1_555 E NA NA . A NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc2 A O VAL 196 A VAL 176 1_555 E NA NA . A NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc3 A OD2 ASP 231 A ASP 211 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc4 A OD2 ASP 252 A ASP 232 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc5 D NA NA . A NA 403 1_555 G O HOH . A HOH 557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc6 D NA NA . A NA 403 1_555 G O HOH . A HOH 658 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc7 D NA NA . A NA 403 1_555 G O HOH . A HOH 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc8 E NA NA . A NA 404 1_555 G O HOH . A HOH 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc9 E NA NA . A NA 404 1_555 G O HOH . A HOH 598 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc10 E NA NA . A NA 404 1_555 G O HOH . A HOH 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? # _chem_comp.formula 'C7 H6 O2' _chem_comp.formula_weight 122.121 _chem_comp.id BEZ _chem_comp.mon_nstd_flag . _chem_comp.name 'BENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 BEZ doub 76 n n C O2 BEZ sing 77 n n C C1 BEZ sing 78 n n O2 HO2 BEZ sing 79 n n C1 C2 BEZ doub 80 n y C1 C6 BEZ sing 81 n y C2 C3 BEZ sing 82 n y C2 H2 BEZ sing 83 n n C3 C4 BEZ doub 84 n y C3 H3 BEZ sing 85 n n C4 C5 BEZ sing 86 n y C4 H4 BEZ sing 87 n n C5 C6 BEZ doub 88 n y C5 H5 BEZ sing 89 n n C6 H6 BEZ sing 90 n n # _atom_sites.entry_id 6EF6 _atom_sites.fract_transf_matrix[1][1] 0.013887 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001245 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014276 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016535 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BEZ A 1 401 1 BEZ BEZ . C 3 JFN A 1 402 1 JFN JFN . D 4 NA A 1 403 1 NA NA . E 4 NA A 1 404 2 NA NA . F 5 ACT A 1 405 1 ACT ACT . G 6 HOH A 1 501 184 HOH HOH . G 6 HOH A 2 502 223 HOH HOH . G 6 HOH A 3 503 27 HOH HOH . G 6 HOH A 4 504 36 HOH HOH . G 6 HOH A 5 505 155 HOH HOH . G 6 HOH A 6 506 47 HOH HOH . G 6 HOH A 7 507 203 HOH HOH . G 6 HOH A 8 508 13 HOH HOH . G 6 HOH A 9 509 114 HOH HOH . G 6 HOH A 10 510 157 HOH HOH . G 6 HOH A 11 511 200 HOH HOH . G 6 HOH A 12 512 163 HOH HOH . G 6 HOH A 13 513 39 HOH HOH . G 6 HOH A 14 514 100 HOH HOH . G 6 HOH A 15 515 154 HOH HOH . G 6 HOH A 16 516 161 HOH HOH . G 6 HOH A 17 517 217 HOH HOH . G 6 HOH A 18 518 208 HOH HOH . G 6 HOH A 19 519 211 HOH HOH . G 6 HOH A 20 520 166 HOH HOH . G 6 HOH A 21 521 40 HOH HOH . G 6 HOH A 22 522 121 HOH HOH . G 6 HOH A 23 523 196 HOH HOH . G 6 HOH A 24 524 61 HOH HOH . G 6 HOH A 25 525 187 HOH HOH . G 6 HOH A 26 526 86 HOH HOH . G 6 HOH A 27 527 191 HOH HOH . G 6 HOH A 28 528 165 HOH HOH . G 6 HOH A 29 529 79 HOH HOH . G 6 HOH A 30 530 136 HOH HOH . G 6 HOH A 31 531 195 HOH HOH . G 6 HOH A 32 532 59 HOH HOH . G 6 HOH A 33 533 63 HOH HOH . G 6 HOH A 34 534 90 HOH HOH . G 6 HOH A 35 535 221 HOH HOH . G 6 HOH A 36 536 73 HOH HOH . G 6 HOH A 37 537 80 HOH HOH . G 6 HOH A 38 538 12 HOH HOH . G 6 HOH A 39 539 127 HOH HOH . G 6 HOH A 40 540 72 HOH HOH . G 6 HOH A 41 541 60 HOH HOH . G 6 HOH A 42 542 131 HOH HOH . G 6 HOH A 43 543 152 HOH HOH . G 6 HOH A 44 544 16 HOH HOH . G 6 HOH A 45 545 26 HOH HOH . G 6 HOH A 46 546 117 HOH HOH . G 6 HOH A 47 547 23 HOH HOH . G 6 HOH A 48 548 57 HOH HOH . G 6 HOH A 49 549 8 HOH HOH . G 6 HOH A 50 550 55 HOH HOH . G 6 HOH A 51 551 201 HOH HOH . G 6 HOH A 52 552 54 HOH HOH . G 6 HOH A 53 553 145 HOH HOH . G 6 HOH A 54 554 125 HOH HOH . G 6 HOH A 55 555 25 HOH HOH . G 6 HOH A 56 556 71 HOH HOH . G 6 HOH A 57 557 162 HOH HOH . G 6 HOH A 58 558 66 HOH HOH . G 6 HOH A 59 559 29 HOH HOH . G 6 HOH A 60 560 30 HOH HOH . G 6 HOH A 61 561 181 HOH HOH . G 6 HOH A 62 562 78 HOH HOH . G 6 HOH A 63 563 186 HOH HOH . G 6 HOH A 64 564 1 HOH HOH . G 6 HOH A 65 565 150 HOH HOH . G 6 HOH A 66 566 17 HOH HOH . G 6 HOH A 67 567 48 HOH HOH . G 6 HOH A 68 568 140 HOH HOH . G 6 HOH A 69 569 33 HOH HOH . G 6 HOH A 70 570 132 HOH HOH . G 6 HOH A 71 571 43 HOH HOH . G 6 HOH A 72 572 58 HOH HOH . G 6 HOH A 73 573 24 HOH HOH . G 6 HOH A 74 574 173 HOH HOH . G 6 HOH A 75 575 5 HOH HOH . G 6 HOH A 76 576 113 HOH HOH . G 6 HOH A 77 577 85 HOH HOH . G 6 HOH A 78 578 53 HOH HOH . G 6 HOH A 79 579 84 HOH HOH . G 6 HOH A 80 580 106 HOH HOH . G 6 HOH A 81 581 102 HOH HOH . G 6 HOH A 82 582 198 HOH HOH . G 6 HOH A 83 583 222 HOH HOH . G 6 HOH A 84 584 95 HOH HOH . G 6 HOH A 85 585 111 HOH HOH . G 6 HOH A 86 586 18 HOH HOH . G 6 HOH A 87 587 220 HOH HOH . G 6 HOH A 88 588 124 HOH HOH . G 6 HOH A 89 589 83 HOH HOH . G 6 HOH A 90 590 224 HOH HOH . G 6 HOH A 91 591 3 HOH HOH . G 6 HOH A 92 592 135 HOH HOH . G 6 HOH A 93 593 62 HOH HOH . G 6 HOH A 94 594 6 HOH HOH . G 6 HOH A 95 595 19 HOH HOH . G 6 HOH A 96 596 122 HOH HOH . G 6 HOH A 97 597 64 HOH HOH . G 6 HOH A 98 598 41 HOH HOH . G 6 HOH A 99 599 28 HOH HOH . G 6 HOH A 100 600 197 HOH HOH . G 6 HOH A 101 601 179 HOH HOH . G 6 HOH A 102 602 151 HOH HOH . G 6 HOH A 103 603 45 HOH HOH . G 6 HOH A 104 604 56 HOH HOH . G 6 HOH A 105 605 2 HOH HOH . G 6 HOH A 106 606 133 HOH HOH . G 6 HOH A 107 607 205 HOH HOH . G 6 HOH A 108 608 93 HOH HOH . G 6 HOH A 109 609 231 HOH HOH . G 6 HOH A 110 610 109 HOH HOH . G 6 HOH A 111 611 42 HOH HOH . G 6 HOH A 112 612 10 HOH HOH . G 6 HOH A 113 613 38 HOH HOH . G 6 HOH A 114 614 169 HOH HOH . G 6 HOH A 115 615 107 HOH HOH . G 6 HOH A 116 616 189 HOH HOH . G 6 HOH A 117 617 14 HOH HOH . G 6 HOH A 118 618 143 HOH HOH . G 6 HOH A 119 619 103 HOH HOH . G 6 HOH A 120 620 7 HOH HOH . G 6 HOH A 121 621 88 HOH HOH . G 6 HOH A 122 622 168 HOH HOH . G 6 HOH A 123 623 15 HOH HOH . G 6 HOH A 124 624 21 HOH HOH . G 6 HOH A 125 625 35 HOH HOH . G 6 HOH A 126 626 11 HOH HOH . G 6 HOH A 127 627 82 HOH HOH . G 6 HOH A 128 628 185 HOH HOH . G 6 HOH A 129 629 97 HOH HOH . G 6 HOH A 130 630 118 HOH HOH . G 6 HOH A 131 631 137 HOH HOH . G 6 HOH A 132 632 31 HOH HOH . G 6 HOH A 133 633 65 HOH HOH . G 6 HOH A 134 634 115 HOH HOH . G 6 HOH A 135 635 108 HOH HOH . G 6 HOH A 136 636 92 HOH HOH . G 6 HOH A 137 637 171 HOH HOH . G 6 HOH A 138 638 209 HOH HOH . G 6 HOH A 139 639 112 HOH HOH . G 6 HOH A 140 640 101 HOH HOH . G 6 HOH A 141 641 202 HOH HOH . G 6 HOH A 142 642 4 HOH HOH . G 6 HOH A 143 643 146 HOH HOH . G 6 HOH A 144 644 226 HOH HOH . G 6 HOH A 145 645 216 HOH HOH . G 6 HOH A 146 646 158 HOH HOH . G 6 HOH A 147 647 199 HOH HOH . G 6 HOH A 148 648 164 HOH HOH . G 6 HOH A 149 649 37 HOH HOH . G 6 HOH A 150 650 98 HOH HOH . G 6 HOH A 151 651 207 HOH HOH . G 6 HOH A 152 652 76 HOH HOH . G 6 HOH A 153 653 153 HOH HOH . G 6 HOH A 154 654 110 HOH HOH . G 6 HOH A 155 655 51 HOH HOH . G 6 HOH A 156 656 49 HOH HOH . G 6 HOH A 157 657 148 HOH HOH . G 6 HOH A 158 658 74 HOH HOH . G 6 HOH A 159 659 94 HOH HOH . G 6 HOH A 160 660 77 HOH HOH . G 6 HOH A 161 661 160 HOH HOH . G 6 HOH A 162 662 141 HOH HOH . G 6 HOH A 163 663 46 HOH HOH . G 6 HOH A 164 664 96 HOH HOH . G 6 HOH A 165 665 52 HOH HOH . G 6 HOH A 166 666 91 HOH HOH . G 6 HOH A 167 667 204 HOH HOH . G 6 HOH A 168 668 177 HOH HOH . G 6 HOH A 169 669 123 HOH HOH . G 6 HOH A 170 670 218 HOH HOH . G 6 HOH A 171 671 9 HOH HOH . G 6 HOH A 172 672 81 HOH HOH . G 6 HOH A 173 673 22 HOH HOH . G 6 HOH A 174 674 89 HOH HOH . G 6 HOH A 175 675 156 HOH HOH . G 6 HOH A 176 676 214 HOH HOH . G 6 HOH A 177 677 176 HOH HOH . G 6 HOH A 178 678 20 HOH HOH . G 6 HOH A 179 679 34 HOH HOH . G 6 HOH A 180 680 67 HOH HOH . G 6 HOH A 181 681 75 HOH HOH . G 6 HOH A 182 682 180 HOH HOH . G 6 HOH A 183 683 138 HOH HOH . G 6 HOH A 184 684 128 HOH HOH . G 6 HOH A 185 685 167 HOH HOH . G 6 HOH A 186 686 213 HOH HOH . G 6 HOH A 187 687 44 HOH HOH . G 6 HOH A 188 688 68 HOH HOH . G 6 HOH A 189 689 142 HOH HOH . G 6 HOH A 190 690 159 HOH HOH . G 6 HOH A 191 691 175 HOH HOH . G 6 HOH A 192 692 134 HOH HOH . G 6 HOH A 193 693 139 HOH HOH . G 6 HOH A 194 694 194 HOH HOH . G 6 HOH A 195 695 149 HOH HOH . G 6 HOH A 196 696 105 HOH HOH . G 6 HOH A 197 697 126 HOH HOH . G 6 HOH A 198 698 225 HOH HOH . G 6 HOH A 199 699 120 HOH HOH . G 6 HOH A 200 700 69 HOH HOH . G 6 HOH A 201 701 212 HOH HOH . G 6 HOH A 202 702 190 HOH HOH . G 6 HOH A 203 703 192 HOH HOH . G 6 HOH A 204 704 116 HOH HOH . G 6 HOH A 205 705 170 HOH HOH . G 6 HOH A 206 706 230 HOH HOH . G 6 HOH A 207 707 219 HOH HOH . G 6 HOH A 208 708 87 HOH HOH . G 6 HOH A 209 709 193 HOH HOH . G 6 HOH A 210 710 174 HOH HOH . G 6 HOH A 211 711 130 HOH HOH . G 6 HOH A 212 712 229 HOH HOH . G 6 HOH A 213 713 147 HOH HOH . G 6 HOH A 214 714 182 HOH HOH . G 6 HOH A 215 715 32 HOH HOH . G 6 HOH A 216 716 50 HOH HOH . G 6 HOH A 217 717 183 HOH HOH . G 6 HOH A 218 718 210 HOH HOH . G 6 HOH A 219 719 129 HOH HOH . G 6 HOH A 220 720 104 HOH HOH . G 6 HOH A 221 721 99 HOH HOH . G 6 HOH A 222 722 172 HOH HOH . G 6 HOH A 223 723 70 HOH HOH . G 6 HOH A 224 724 206 HOH HOH . G 6 HOH A 225 725 144 HOH HOH . G 6 HOH A 226 726 227 HOH HOH . G 6 HOH A 227 727 119 HOH HOH . G 6 HOH A 228 728 228 HOH HOH . G 6 HOH A 229 729 178 HOH HOH . G 6 HOH A 230 730 215 HOH HOH . G 6 HOH A 231 731 188 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C BEZ . . . B 2 11.738 19.898 33.789 1 33.55 ? C BEZ 401 A 1 HETATM 2 O O1 BEZ . . . B 2 12.868 20.359 33.951 1 31 ? O1 BEZ 401 A 1 HETATM 3 O O2 BEZ . . . B 2 10.73 20.62 34.035 1 36.59 ? O2 BEZ 401 A 1 HETATM 4 C C1 BEZ . . . B 2 11.608 18.492 33.31 1 28.18 ? C1 BEZ 401 A 1 HETATM 5 C C2 BEZ . . . B 2 10.428 17.796 33.495 1 32.25 ? C2 BEZ 401 A 1 HETATM 6 C C3 BEZ . . . B 2 10.327 16.487 33.038 1 35.12 ? C3 BEZ 401 A 1 HETATM 7 C C4 BEZ . . . B 2 11.41 15.882 32.415 1 34.21 ? C4 BEZ 401 A 1 HETATM 8 C C5 BEZ . . . B 2 12.594 16.589 32.229 1 29.93 ? C5 BEZ 401 A 1 HETATM 9 C C6 BEZ . . . B 2 12.689 17.886 32.688 1 33.39 ? C6 BEZ 401 A 1 HETATM 10 H H2 BEZ . . . B 2 9.543 18.312 33.869 1 38.63 ? H2 BEZ 401 A 1 HETATM 11 H H3 BEZ . . . B 2 9.396 15.935 33.168 1 42.09 ? H3 BEZ 401 A 1 HETATM 12 H H4 BEZ . . . B 2 11.334 14.85 32.072 1 40.99 ? H4 BEZ 401 A 1 HETATM 13 H H5 BEZ . . . B 2 13.386 16.172 31.606 1 35.85 ? H5 BEZ 401 A 1 HETATM 14 H H6 BEZ . . . B 2 13.62 18.438 32.561 1 40.01 ? H6 BEZ 401 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #