data_6EF7 # _model_server_result.job_id felFqkv5fiYBaPT-qfSRPg _model_server_result.datetime_utc '2025-04-26 21:27:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ef7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6EF7 # _exptl.entry_id 6EF7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EF7 _cell.length_a 33.92 _cell.length_b 46.21 _cell.length_c 72.97 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EF7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 5 A ASP 399 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc2 A OD2 ASP 5 A ASP 399 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc3 A O GLU 7 A GLU 401 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc4 A OD1 ASP 33 A ASP 427 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc5 A OD2 ASP 33 A ASP 427 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc6 A OD1 ASN 34 A ASN 428 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc7 A OD2 ASP 96 A ASP 490 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6EF7 _atom_sites.fract_transf_matrix[1][1] 0.029481 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013704 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 601 1 CA CA . C 3 HOH A 1 701 189 HOH HOH . C 3 HOH A 2 702 228 HOH HOH . C 3 HOH A 3 703 141 HOH HOH . C 3 HOH A 4 704 214 HOH HOH . C 3 HOH A 5 705 142 HOH HOH . C 3 HOH A 6 706 63 HOH HOH . C 3 HOH A 7 707 158 HOH HOH . C 3 HOH A 8 708 200 HOH HOH . C 3 HOH A 9 709 36 HOH HOH . C 3 HOH A 10 710 202 HOH HOH . C 3 HOH A 11 711 249 HOH HOH . C 3 HOH A 12 712 100 HOH HOH . C 3 HOH A 13 713 120 HOH HOH . C 3 HOH A 14 714 110 HOH HOH . C 3 HOH A 15 715 99 HOH HOH . C 3 HOH A 16 716 219 HOH HOH . C 3 HOH A 17 717 115 HOH HOH . C 3 HOH A 18 718 23 HOH HOH . C 3 HOH A 19 719 128 HOH HOH . C 3 HOH A 20 720 5 HOH HOH . C 3 HOH A 21 721 39 HOH HOH . C 3 HOH A 22 722 84 HOH HOH . C 3 HOH A 23 723 13 HOH HOH . C 3 HOH A 24 724 9 HOH HOH . C 3 HOH A 25 725 79 HOH HOH . C 3 HOH A 26 726 137 HOH HOH . C 3 HOH A 27 727 55 HOH HOH . C 3 HOH A 28 728 42 HOH HOH . C 3 HOH A 29 729 170 HOH HOH . C 3 HOH A 30 730 12 HOH HOH . C 3 HOH A 31 731 176 HOH HOH . C 3 HOH A 32 732 215 HOH HOH . C 3 HOH A 33 733 138 HOH HOH . C 3 HOH A 34 734 211 HOH HOH . C 3 HOH A 35 735 32 HOH HOH . C 3 HOH A 36 736 38 HOH HOH . C 3 HOH A 37 737 18 HOH HOH . C 3 HOH A 38 738 146 HOH HOH . C 3 HOH A 39 739 75 HOH HOH . C 3 HOH A 40 740 140 HOH HOH . C 3 HOH A 41 741 74 HOH HOH . C 3 HOH A 42 742 160 HOH HOH . C 3 HOH A 43 743 34 HOH HOH . C 3 HOH A 44 744 105 HOH HOH . C 3 HOH A 45 745 7 HOH HOH . C 3 HOH A 46 746 184 HOH HOH . C 3 HOH A 47 747 97 HOH HOH . C 3 HOH A 48 748 107 HOH HOH . C 3 HOH A 49 749 194 HOH HOH . C 3 HOH A 50 750 73 HOH HOH . C 3 HOH A 51 751 240 HOH HOH . C 3 HOH A 52 752 17 HOH HOH . C 3 HOH A 53 753 95 HOH HOH . C 3 HOH A 54 754 135 HOH HOH . C 3 HOH A 55 755 119 HOH HOH . C 3 HOH A 56 756 103 HOH HOH . C 3 HOH A 57 757 25 HOH HOH . C 3 HOH A 58 758 58 HOH HOH . C 3 HOH A 59 759 14 HOH HOH . C 3 HOH A 60 760 80 HOH HOH . C 3 HOH A 61 761 41 HOH HOH . C 3 HOH A 62 762 71 HOH HOH . C 3 HOH A 63 763 227 HOH HOH . C 3 HOH A 64 764 167 HOH HOH . C 3 HOH A 65 765 147 HOH HOH . C 3 HOH A 66 766 21 HOH HOH . C 3 HOH A 67 767 150 HOH HOH . C 3 HOH A 68 768 45 HOH HOH . C 3 HOH A 69 769 114 HOH HOH . C 3 HOH A 70 770 10 HOH HOH . C 3 HOH A 71 771 148 HOH HOH . C 3 HOH A 72 772 8 HOH HOH . C 3 HOH A 73 773 183 HOH HOH . C 3 HOH A 74 774 70 HOH HOH . C 3 HOH A 75 775 143 HOH HOH . C 3 HOH A 76 776 2 HOH HOH . C 3 HOH A 77 777 59 HOH HOH . C 3 HOH A 78 778 30 HOH HOH . C 3 HOH A 79 779 166 HOH HOH . C 3 HOH A 80 780 43 HOH HOH . C 3 HOH A 81 781 175 HOH HOH . C 3 HOH A 82 782 29 HOH HOH . C 3 HOH A 83 783 195 HOH HOH . C 3 HOH A 84 784 37 HOH HOH . C 3 HOH A 85 785 90 HOH HOH . C 3 HOH A 86 786 173 HOH HOH . C 3 HOH A 87 787 116 HOH HOH . C 3 HOH A 88 788 181 HOH HOH . C 3 HOH A 89 789 4 HOH HOH . C 3 HOH A 90 790 218 HOH HOH . C 3 HOH A 91 791 72 HOH HOH . C 3 HOH A 92 792 193 HOH HOH . C 3 HOH A 93 793 168 HOH HOH . C 3 HOH A 94 794 255 HOH HOH . C 3 HOH A 95 795 198 HOH HOH . C 3 HOH A 96 796 61 HOH HOH . C 3 HOH A 97 797 28 HOH HOH . C 3 HOH A 98 798 27 HOH HOH . C 3 HOH A 99 799 199 HOH HOH . C 3 HOH A 100 800 134 HOH HOH . C 3 HOH A 101 801 26 HOH HOH . C 3 HOH A 102 802 190 HOH HOH . C 3 HOH A 103 803 196 HOH HOH . C 3 HOH A 104 804 222 HOH HOH . C 3 HOH A 105 805 180 HOH HOH . C 3 HOH A 106 806 35 HOH HOH . C 3 HOH A 107 807 56 HOH HOH . C 3 HOH A 108 808 149 HOH HOH . C 3 HOH A 109 809 54 HOH HOH . C 3 HOH A 110 810 67 HOH HOH . C 3 HOH A 111 811 3 HOH HOH . C 3 HOH A 112 812 213 HOH HOH . C 3 HOH A 113 813 153 HOH HOH . C 3 HOH A 114 814 201 HOH HOH . C 3 HOH A 115 815 92 HOH HOH . C 3 HOH A 116 816 57 HOH HOH . C 3 HOH A 117 817 64 HOH HOH . C 3 HOH A 118 818 239 HOH HOH . C 3 HOH A 119 819 161 HOH HOH . C 3 HOH A 120 820 65 HOH HOH . C 3 HOH A 121 821 22 HOH HOH . C 3 HOH A 122 822 112 HOH HOH . C 3 HOH A 123 823 224 HOH HOH . C 3 HOH A 124 824 208 HOH HOH . C 3 HOH A 125 825 246 HOH HOH . C 3 HOH A 126 826 86 HOH HOH . C 3 HOH A 127 827 94 HOH HOH . C 3 HOH A 128 828 109 HOH HOH . C 3 HOH A 129 829 91 HOH HOH . C 3 HOH A 130 830 96 HOH HOH . C 3 HOH A 131 831 49 HOH HOH . C 3 HOH A 132 832 78 HOH HOH . C 3 HOH A 133 833 19 HOH HOH . C 3 HOH A 134 834 11 HOH HOH . C 3 HOH A 135 835 113 HOH HOH . C 3 HOH A 136 836 98 HOH HOH . C 3 HOH A 137 837 164 HOH HOH . C 3 HOH A 138 838 68 HOH HOH . C 3 HOH A 139 839 52 HOH HOH . C 3 HOH A 140 840 145 HOH HOH . C 3 HOH A 141 841 88 HOH HOH . C 3 HOH A 142 842 85 HOH HOH . C 3 HOH A 143 843 229 HOH HOH . C 3 HOH A 144 844 6 HOH HOH . C 3 HOH A 145 845 89 HOH HOH . C 3 HOH A 146 846 1 HOH HOH . C 3 HOH A 147 847 165 HOH HOH . C 3 HOH A 148 848 192 HOH HOH . C 3 HOH A 149 849 24 HOH HOH . C 3 HOH A 150 850 245 HOH HOH . C 3 HOH A 151 851 238 HOH HOH . C 3 HOH A 152 852 242 HOH HOH . C 3 HOH A 153 853 40 HOH HOH . C 3 HOH A 154 854 66 HOH HOH . C 3 HOH A 155 855 81 HOH HOH . C 3 HOH A 156 856 15 HOH HOH . C 3 HOH A 157 857 20 HOH HOH . C 3 HOH A 158 858 191 HOH HOH . C 3 HOH A 159 859 186 HOH HOH . C 3 HOH A 160 860 188 HOH HOH . C 3 HOH A 161 861 33 HOH HOH . C 3 HOH A 162 862 144 HOH HOH . C 3 HOH A 163 863 46 HOH HOH . C 3 HOH A 164 864 260 HOH HOH . C 3 HOH A 165 865 217 HOH HOH . C 3 HOH A 166 866 221 HOH HOH . C 3 HOH A 167 867 253 HOH HOH . C 3 HOH A 168 868 126 HOH HOH . C 3 HOH A 169 869 233 HOH HOH . C 3 HOH A 170 870 152 HOH HOH . C 3 HOH A 171 871 209 HOH HOH . C 3 HOH A 172 872 256 HOH HOH . C 3 HOH A 173 873 50 HOH HOH . C 3 HOH A 174 874 163 HOH HOH . C 3 HOH A 175 875 220 HOH HOH . C 3 HOH A 176 876 206 HOH HOH . C 3 HOH A 177 877 248 HOH HOH . C 3 HOH A 178 878 77 HOH HOH . C 3 HOH A 179 879 82 HOH HOH . C 3 HOH A 180 880 132 HOH HOH . C 3 HOH A 181 881 133 HOH HOH . C 3 HOH A 182 882 69 HOH HOH . C 3 HOH A 183 883 223 HOH HOH . C 3 HOH A 184 884 124 HOH HOH . C 3 HOH A 185 885 226 HOH HOH . C 3 HOH A 186 886 44 HOH HOH . C 3 HOH A 187 887 259 HOH HOH . C 3 HOH A 188 888 106 HOH HOH . C 3 HOH A 189 889 216 HOH HOH . C 3 HOH A 190 890 130 HOH HOH . C 3 HOH A 191 891 182 HOH HOH . C 3 HOH A 192 892 53 HOH HOH . C 3 HOH A 193 893 118 HOH HOH . C 3 HOH A 194 894 51 HOH HOH . C 3 HOH A 195 895 101 HOH HOH . C 3 HOH A 196 896 125 HOH HOH . C 3 HOH A 197 897 203 HOH HOH . C 3 HOH A 198 898 127 HOH HOH . C 3 HOH A 199 899 231 HOH HOH . C 3 HOH A 200 900 48 HOH HOH . C 3 HOH A 201 901 197 HOH HOH . C 3 HOH A 202 902 169 HOH HOH . C 3 HOH A 203 903 258 HOH HOH . C 3 HOH A 204 904 241 HOH HOH . C 3 HOH A 205 905 62 HOH HOH . C 3 HOH A 206 906 108 HOH HOH . C 3 HOH A 207 907 16 HOH HOH . C 3 HOH A 208 908 122 HOH HOH . C 3 HOH A 209 909 155 HOH HOH . C 3 HOH A 210 910 187 HOH HOH . C 3 HOH A 211 911 159 HOH HOH . C 3 HOH A 212 912 87 HOH HOH . C 3 HOH A 213 913 230 HOH HOH . C 3 HOH A 214 914 117 HOH HOH . C 3 HOH A 215 915 139 HOH HOH . C 3 HOH A 216 916 177 HOH HOH . C 3 HOH A 217 917 251 HOH HOH . C 3 HOH A 218 918 234 HOH HOH . C 3 HOH A 219 919 151 HOH HOH . C 3 HOH A 220 920 83 HOH HOH . C 3 HOH A 221 921 178 HOH HOH . C 3 HOH A 222 922 235 HOH HOH . C 3 HOH A 223 923 131 HOH HOH . C 3 HOH A 224 924 60 HOH HOH . C 3 HOH A 225 925 185 HOH HOH . C 3 HOH A 226 926 123 HOH HOH . C 3 HOH A 227 927 47 HOH HOH . C 3 HOH A 228 928 232 HOH HOH . C 3 HOH A 229 929 174 HOH HOH . C 3 HOH A 230 930 156 HOH HOH . C 3 HOH A 231 931 243 HOH HOH . C 3 HOH A 232 932 102 HOH HOH . C 3 HOH A 233 933 121 HOH HOH . C 3 HOH A 234 934 76 HOH HOH . C 3 HOH A 235 935 207 HOH HOH . C 3 HOH A 236 936 225 HOH HOH . C 3 HOH A 237 937 93 HOH HOH . C 3 HOH A 238 938 129 HOH HOH . C 3 HOH A 239 939 172 HOH HOH . C 3 HOH A 240 940 171 HOH HOH . C 3 HOH A 241 941 111 HOH HOH . C 3 HOH A 242 942 31 HOH HOH . C 3 HOH A 243 943 179 HOH HOH . C 3 HOH A 244 944 136 HOH HOH . C 3 HOH A 245 945 237 HOH HOH . C 3 HOH A 246 946 247 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 9.838 _atom_site.Cartn_y 22.061 _atom_site.Cartn_z 85.229 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 5.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #