data_6EFB
#
_model_server_result.job_id            amMqQb36WgD-BKJMoO2q0w 
_model_server_result.datetime_utc      '2025-04-13 06:59:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6efb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    6EFB 
#
_exptl.entry_id    6EFB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.6 
_cell.angle_gamma         90 
_cell.entry_id            6EFB 
_cell.length_a            24.27 
_cell.length_b            62.58 
_cell.length_c            62.93 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6EFB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 6 A ASP 257 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? 
metalc ? metalc2 A OD2 ASP 6 A ASP 257 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? 
metalc ? metalc3 A O GLU 8 A GLU 259 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc4 A OD1 ASP 34 A ASP 285 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? 
metalc ? metalc5 A OD2 ASP 34 A ASP 285 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? 
metalc ? metalc6 A OD1 ASN 35 A ASN 286 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? 
metalc ? metalc7 A OD2 ASP 97 A ASP 348 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6EFB 
_atom_sites.fract_transf_matrix[1][1]    0.041203 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006231 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01598 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016071 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 501 201 GOL GOL . 
C 3 CA A 1 502 1 CA CA . 
D 4 SO4 A 1 503 1 SO4 SO4 . 
E 5 HOH A 1 601 121 HOH HOH . 
E 5 HOH A 2 602 23 HOH HOH . 
E 5 HOH A 3 603 126 HOH HOH . 
E 5 HOH A 4 604 42 HOH HOH . 
E 5 HOH A 5 605 82 HOH HOH . 
E 5 HOH A 6 606 47 HOH HOH . 
E 5 HOH A 7 607 11 HOH HOH . 
E 5 HOH A 8 608 37 HOH HOH . 
E 5 HOH A 9 609 14 HOH HOH . 
E 5 HOH A 10 610 140 HOH HOH . 
E 5 HOH A 11 611 53 HOH HOH . 
E 5 HOH A 12 612 35 HOH HOH . 
E 5 HOH A 13 613 132 HOH HOH . 
E 5 HOH A 14 614 116 HOH HOH . 
E 5 HOH A 15 615 25 HOH HOH . 
E 5 HOH A 16 616 85 HOH HOH . 
E 5 HOH A 17 617 86 HOH HOH . 
E 5 HOH A 18 618 55 HOH HOH . 
E 5 HOH A 19 619 103 HOH HOH . 
E 5 HOH A 20 620 27 HOH HOH . 
E 5 HOH A 21 621 88 HOH HOH . 
E 5 HOH A 22 622 65 HOH HOH . 
E 5 HOH A 23 623 21 HOH HOH . 
E 5 HOH A 24 624 9 HOH HOH . 
E 5 HOH A 25 625 57 HOH HOH . 
E 5 HOH A 26 626 31 HOH HOH . 
E 5 HOH A 27 627 50 HOH HOH . 
E 5 HOH A 28 628 16 HOH HOH . 
E 5 HOH A 29 629 51 HOH HOH . 
E 5 HOH A 30 630 38 HOH HOH . 
E 5 HOH A 31 631 59 HOH HOH . 
E 5 HOH A 32 632 101 HOH HOH . 
E 5 HOH A 33 633 80 HOH HOH . 
E 5 HOH A 34 634 18 HOH HOH . 
E 5 HOH A 35 635 102 HOH HOH . 
E 5 HOH A 36 636 150 HOH HOH . 
E 5 HOH A 37 637 34 HOH HOH . 
E 5 HOH A 38 638 12 HOH HOH . 
E 5 HOH A 39 639 52 HOH HOH . 
E 5 HOH A 40 640 7 HOH HOH . 
E 5 HOH A 41 641 30 HOH HOH . 
E 5 HOH A 42 642 83 HOH HOH . 
E 5 HOH A 43 643 127 HOH HOH . 
E 5 HOH A 44 644 13 HOH HOH . 
E 5 HOH A 45 645 104 HOH HOH . 
E 5 HOH A 46 646 40 HOH HOH . 
E 5 HOH A 47 647 89 HOH HOH . 
E 5 HOH A 48 648 3 HOH HOH . 
E 5 HOH A 49 649 68 HOH HOH . 
E 5 HOH A 50 650 6 HOH HOH . 
E 5 HOH A 51 651 33 HOH HOH . 
E 5 HOH A 52 652 122 HOH HOH . 
E 5 HOH A 53 653 67 HOH HOH . 
E 5 HOH A 54 654 151 HOH HOH . 
E 5 HOH A 55 655 79 HOH HOH . 
E 5 HOH A 56 656 73 HOH HOH . 
E 5 HOH A 57 657 66 HOH HOH . 
E 5 HOH A 58 658 29 HOH HOH . 
E 5 HOH A 59 659 87 HOH HOH . 
E 5 HOH A 60 660 84 HOH HOH . 
E 5 HOH A 61 661 41 HOH HOH . 
E 5 HOH A 62 662 77 HOH HOH . 
E 5 HOH A 63 663 46 HOH HOH . 
E 5 HOH A 64 664 93 HOH HOH . 
E 5 HOH A 65 665 91 HOH HOH . 
E 5 HOH A 66 666 15 HOH HOH . 
E 5 HOH A 67 667 32 HOH HOH . 
E 5 HOH A 68 668 45 HOH HOH . 
E 5 HOH A 69 669 76 HOH HOH . 
E 5 HOH A 70 670 1 HOH HOH . 
E 5 HOH A 71 671 2 HOH HOH . 
E 5 HOH A 72 672 96 HOH HOH . 
E 5 HOH A 73 673 44 HOH HOH . 
E 5 HOH A 74 674 19 HOH HOH . 
E 5 HOH A 75 675 54 HOH HOH . 
E 5 HOH A 76 676 74 HOH HOH . 
E 5 HOH A 77 677 49 HOH HOH . 
E 5 HOH A 78 678 8 HOH HOH . 
E 5 HOH A 79 679 64 HOH HOH . 
E 5 HOH A 80 680 26 HOH HOH . 
E 5 HOH A 81 681 17 HOH HOH . 
E 5 HOH A 82 682 106 HOH HOH . 
E 5 HOH A 83 683 105 HOH HOH . 
E 5 HOH A 84 684 48 HOH HOH . 
E 5 HOH A 85 685 92 HOH HOH . 
E 5 HOH A 86 686 56 HOH HOH . 
E 5 HOH A 87 687 98 HOH HOH . 
E 5 HOH A 88 688 62 HOH HOH . 
E 5 HOH A 89 689 22 HOH HOH . 
E 5 HOH A 90 690 63 HOH HOH . 
E 5 HOH A 91 691 4 HOH HOH . 
E 5 HOH A 92 692 60 HOH HOH . 
E 5 HOH A 93 693 28 HOH HOH . 
E 5 HOH A 94 694 148 HOH HOH . 
E 5 HOH A 95 695 39 HOH HOH . 
E 5 HOH A 96 696 124 HOH HOH . 
E 5 HOH A 97 697 10 HOH HOH . 
E 5 HOH A 98 698 36 HOH HOH . 
E 5 HOH A 99 699 146 HOH HOH . 
E 5 HOH A 100 700 130 HOH HOH . 
E 5 HOH A 101 701 97 HOH HOH . 
E 5 HOH A 102 702 69 HOH HOH . 
E 5 HOH A 103 703 61 HOH HOH . 
E 5 HOH A 104 704 90 HOH HOH . 
E 5 HOH A 105 705 131 HOH HOH . 
E 5 HOH A 106 706 153 HOH HOH . 
E 5 HOH A 107 707 78 HOH HOH . 
E 5 HOH A 108 708 58 HOH HOH . 
E 5 HOH A 109 709 99 HOH HOH . 
E 5 HOH A 110 710 81 HOH HOH . 
E 5 HOH A 111 711 5 HOH HOH . 
E 5 HOH A 112 712 147 HOH HOH . 
E 5 HOH A 113 713 125 HOH HOH . 
E 5 HOH A 114 714 129 HOH HOH . 
E 5 HOH A 115 715 133 HOH HOH . 
E 5 HOH A 116 716 100 HOH HOH . 
E 5 HOH A 117 717 114 HOH HOH . 
E 5 HOH A 118 718 94 HOH HOH . 
E 5 HOH A 119 719 149 HOH HOH . 
E 5 HOH A 120 720 152 HOH HOH . 
E 5 HOH A 121 721 75 HOH HOH . 
E 5 HOH A 122 722 138 HOH HOH . 
E 5 HOH A 123 723 143 HOH HOH . 
E 5 HOH A 124 724 95 HOH HOH . 
E 5 HOH A 125 725 139 HOH HOH . 
E 5 HOH A 126 726 113 HOH HOH . 
E 5 HOH A 127 727 71 HOH HOH . 
E 5 HOH A 128 728 43 HOH HOH . 
E 5 HOH A 129 729 145 HOH HOH . 
E 5 HOH A 130 730 160 HOH HOH . 
E 5 HOH A 131 731 154 HOH HOH . 
E 5 HOH A 132 732 107 HOH HOH . 
E 5 HOH A 133 733 157 HOH HOH . 
E 5 HOH A 134 734 70 HOH HOH . 
E 5 HOH A 135 735 117 HOH HOH . 
E 5 HOH A 136 736 123 HOH HOH . 
E 5 HOH A 137 737 72 HOH HOH . 
E 5 HOH A 138 738 109 HOH HOH . 
E 5 HOH A 139 739 111 HOH HOH . 
E 5 HOH A 140 740 119 HOH HOH . 
E 5 HOH A 141 741 112 HOH HOH . 
E 5 HOH A 142 742 118 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -9.249 
_atom_site.Cartn_y               9.397 
_atom_site.Cartn_z               -16.371 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.84 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           502 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           502 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#