data_6EG9 # _model_server_result.job_id YLMYSa7egaPnFlEO-87sWg _model_server_result.datetime_utc '2024-12-30 17:15:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eg9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 6EG9 # _exptl.entry_id 6EG9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6EG9 _cell.length_a 85.037 _cell.length_b 85.037 _cell.length_c 434.301 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EG9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,F,G,H,I,J,L 1 1 A,C,D,E,K 1 3 B,F,G,H,I,J,L 2 1,4 A,C,D,E,K 2 2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_554 y,-x+y,z-1/6 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 -72.3835 3 'crystal symmetry operation' 8_445 x-y-1,-y-1,-z 1 0 0 0 -1 0 0 0 -1 -42.5185 -73.644202 0 4 'crystal symmetry operation' 10_444 -y-1,-x-1,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 -42.5185 -73.644202 -72.3835 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 242 A HIS 390 1_555 E CO CO . A CO 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc2 E CO CO . A CO 503 8_445 B NZ LYS 260 B LYS 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc3 B NE2 HIS 18 B HIS 166 1_555 H CO CO . B CO 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc4 B NE2 HIS 138 B HIS 286 1_555 I CO CO . B CO 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc5 B NE2 HIS 242 B HIS 390 1_555 J CO CO . B CO 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6EG9 _atom_sites.fract_transf_matrix[1][1] 0.01176 _atom_sites.fract_transf_matrix[1][2] 0.006789 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013579 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002303 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0LI A 1 501 1000 0LI 0LI . D 3 SO4 A 1 502 1 SO4 SO4 . E 4 CO A 1 503 4 CO CO . F 2 0LI B 1 501 1003 0LI 0LI . G 3 SO4 B 1 502 2 SO4 SO4 . H 4 CO B 1 503 1 CO CO . I 4 CO B 1 504 2 CO CO . J 4 CO B 1 505 3 CO CO . K 5 HOH A 1 601 43 HOH HOH . K 5 HOH A 2 602 57 HOH HOH . K 5 HOH A 3 603 14 HOH HOH . K 5 HOH A 4 604 5 HOH HOH . K 5 HOH A 5 605 79 HOH HOH . K 5 HOH A 6 606 65 HOH HOH . K 5 HOH A 7 607 7 HOH HOH . K 5 HOH A 8 608 36 HOH HOH . K 5 HOH A 9 609 64 HOH HOH . K 5 HOH A 10 610 67 HOH HOH . K 5 HOH A 11 611 16 HOH HOH . K 5 HOH A 12 612 91 HOH HOH . K 5 HOH A 13 613 9 HOH HOH . K 5 HOH A 14 614 66 HOH HOH . K 5 HOH A 15 615 22 HOH HOH . K 5 HOH A 16 616 73 HOH HOH . K 5 HOH A 17 617 10 HOH HOH . K 5 HOH A 18 618 41 HOH HOH . K 5 HOH A 19 619 62 HOH HOH . K 5 HOH A 20 620 68 HOH HOH . K 5 HOH A 21 621 61 HOH HOH . K 5 HOH A 22 622 96 HOH HOH . K 5 HOH A 23 623 6 HOH HOH . K 5 HOH A 24 624 19 HOH HOH . K 5 HOH A 25 625 42 HOH HOH . K 5 HOH A 26 626 90 HOH HOH . K 5 HOH A 27 627 33 HOH HOH . K 5 HOH A 28 628 13 HOH HOH . K 5 HOH A 29 629 99 HOH HOH . K 5 HOH A 30 630 77 HOH HOH . K 5 HOH A 31 631 20 HOH HOH . K 5 HOH A 32 632 86 HOH HOH . K 5 HOH A 33 633 81 HOH HOH . K 5 HOH A 34 634 82 HOH HOH . K 5 HOH A 35 635 94 HOH HOH . K 5 HOH A 36 636 74 HOH HOH . K 5 HOH A 37 637 83 HOH HOH . K 5 HOH A 38 638 26 HOH HOH . L 5 HOH B 1 601 39 HOH HOH . L 5 HOH B 2 602 24 HOH HOH . L 5 HOH B 3 603 88 HOH HOH . L 5 HOH B 4 604 51 HOH HOH . L 5 HOH B 5 605 23 HOH HOH . L 5 HOH B 6 606 93 HOH HOH . L 5 HOH B 7 607 89 HOH HOH . L 5 HOH B 8 608 12 HOH HOH . L 5 HOH B 9 609 50 HOH HOH . L 5 HOH B 10 610 60 HOH HOH . L 5 HOH B 11 611 21 HOH HOH . L 5 HOH B 12 612 3 HOH HOH . L 5 HOH B 13 613 17 HOH HOH . L 5 HOH B 14 614 59 HOH HOH . L 5 HOH B 15 615 78 HOH HOH . L 5 HOH B 16 616 30 HOH HOH . L 5 HOH B 17 617 38 HOH HOH . L 5 HOH B 18 618 1 HOH HOH . L 5 HOH B 19 619 95 HOH HOH . L 5 HOH B 20 620 8 HOH HOH . L 5 HOH B 21 621 40 HOH HOH . L 5 HOH B 22 622 58 HOH HOH . L 5 HOH B 23 623 49 HOH HOH . L 5 HOH B 24 624 54 HOH HOH . L 5 HOH B 25 625 72 HOH HOH . L 5 HOH B 26 626 85 HOH HOH . L 5 HOH B 27 627 44 HOH HOH . L 5 HOH B 28 628 84 HOH HOH . L 5 HOH B 29 629 4 HOH HOH . L 5 HOH B 30 630 35 HOH HOH . L 5 HOH B 31 631 15 HOH HOH . L 5 HOH B 32 632 70 HOH HOH . L 5 HOH B 33 633 11 HOH HOH . L 5 HOH B 34 634 18 HOH HOH . L 5 HOH B 35 635 31 HOH HOH . L 5 HOH B 36 636 52 HOH HOH . L 5 HOH B 37 637 87 HOH HOH . L 5 HOH B 38 638 2 HOH HOH . L 5 HOH B 39 639 34 HOH HOH . L 5 HOH B 40 640 76 HOH HOH . L 5 HOH B 41 641 37 HOH HOH . L 5 HOH B 42 642 32 HOH HOH . L 5 HOH B 43 643 53 HOH HOH . L 5 HOH B 44 644 27 HOH HOH . L 5 HOH B 45 645 55 HOH HOH . L 5 HOH B 46 646 71 HOH HOH . L 5 HOH B 47 647 47 HOH HOH . L 5 HOH B 48 648 97 HOH HOH . L 5 HOH B 49 649 29 HOH HOH . L 5 HOH B 50 650 45 HOH HOH . L 5 HOH B 51 651 25 HOH HOH . L 5 HOH B 52 652 98 HOH HOH . L 5 HOH B 53 653 75 HOH HOH . L 5 HOH B 54 654 48 HOH HOH . L 5 HOH B 55 655 56 HOH HOH . L 5 HOH B 56 656 63 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 18.599 _atom_site.Cartn_y -27.21 _atom_site.Cartn_z 1.163 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 146 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #