data_6EGA # _model_server_result.job_id RJTJUn3L_hwc9ZHAhkc8JQ _model_server_result.datetime_utc '2025-01-14 13:58:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ega # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6EGA # _exptl.entry_id 6EGA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 580.624 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-{2-[(cyclopropanecarbonyl)amino][1,3]thiazolo[5,4-b]pyridin-5-yl}-N-{4-[(piperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6EGA _cell.length_a 84.629 _cell.length_b 84.629 _cell.length_c 429.041 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EGA _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,M 1 1 B,I,J,K,L,N 1 3 A,C,D,E,F,G,H,M 2 1,4 B,I,J,K,L,N 2 2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 x-y,x,z+1/6 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 71.506833 3 'crystal symmetry operation' 8_565 x-y,-y+1,-z 1 0 0 0 -1 0 0 0 -1 -42.3145 73.290864 0 4 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -42.3145 73.290864 71.506833 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 138 A HIS 286 1_555 E CO CO . A CO 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc2 A NE2 HIS 158 A HIS 306 1_555 H CO CO . A CO 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc3 A NE2 HIS 242 A HIS 390 1_555 F CO CO . A CO 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc4 G CO CO . A CO 505 8_665 B NE2 HIS 242 B HIS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc5 H CO CO . A CO 506 8_565 B NE2 HIS 158 B HIS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc6 B NE2 HIS 18 B HIS 166 1_555 L CO CO . B CO 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc7 B NE2 HIS 18 B HIS 166 1_555 L CO CO . B CO 504 10_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc8 B NE2 HIS 138 B HIS 286 1_555 K CO CO . B CO 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc9 B NE2 HIS 138 B HIS 286 1_555 K CO CO . B CO 503 10_664 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? # _chem_comp.formula 'C29 H27 F3 N6 O2 S' _chem_comp.formula_weight 580.624 _chem_comp.id J8A _chem_comp.mon_nstd_flag . _chem_comp.name 3-{2-[(cyclopropanecarbonyl)amino][1,3]thiazolo[5,4-b]pyridin-5-yl}-N-{4-[(piperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAX CAO J8A sing 173 n n NAX CAP J8A sing 174 n n CAO CAS J8A sing 175 n n CAP CAT J8A sing 176 n n CAS NBN J8A sing 177 n n CAT NBN J8A sing 178 n n NBN CAU J8A sing 179 n n CAU CBG J8A sing 180 n n FAD CBO J8A sing 181 n n CBG CAJ J8A doub 182 n y CBG CBJ J8A sing 183 n y CAJ CAI J8A sing 184 n y CBO CBJ J8A sing 185 n n CBO FAC J8A sing 186 n n CBO FAE J8A sing 187 n n CBJ CAN J8A doub 188 n y CAI CBD J8A doub 189 n y CAN CBD J8A sing 190 n y CBD NAY J8A sing 191 n n NAY CBB J8A sing 192 n n OAA CBB J8A doub 193 n n CBB CBE J8A sing 194 n n CAG CBE J8A doub 195 n y CAG CAF J8A sing 196 n y CBE CAM J8A sing 197 n y CAF CAH J8A doub 198 n y CAM CBF J8A doub 199 n y CAH CBF J8A sing 200 n y CBF CBH J8A sing 201 n n NAW CBH J8A doub 202 n y NAW CBL J8A sing 203 n y CBH CAK J8A sing 204 n y OAB CBC J8A doub 205 n n SBA CBL J8A sing 206 n y SBA CBI J8A sing 207 n y CBL CBK J8A doub 208 n y CAK CAL J8A doub 209 n y CBK CAL J8A sing 210 n y CBK NAV J8A sing 211 n y CBC NAZ J8A sing 212 n n CBC CBM J8A sing 213 n n CAR CBM J8A sing 214 n n CAR CAQ J8A sing 215 n n CBI NAV J8A doub 216 n y CBI NAZ J8A sing 217 n n CBM CAQ J8A sing 218 n n CAF H1 J8A sing 219 n n CAG H2 J8A sing 220 n n CAH H3 J8A sing 221 n n CAI H4 J8A sing 222 n n CAJ H5 J8A sing 223 n n CAK H6 J8A sing 224 n n CAL H7 J8A sing 225 n n CAM H8 J8A sing 226 n n CAN H9 J8A sing 227 n n CAO H10 J8A sing 228 n n CAO H11 J8A sing 229 n n CAP H12 J8A sing 230 n n CAP H13 J8A sing 231 n n CAQ H14 J8A sing 232 n n CAQ H15 J8A sing 233 n n CAR H16 J8A sing 234 n n CAR H17 J8A sing 235 n n CAS H18 J8A sing 236 n n CAS H19 J8A sing 237 n n CAT H20 J8A sing 238 n n CAT H21 J8A sing 239 n n CAU H22 J8A sing 240 n n CAU H23 J8A sing 241 n n NAX H24 J8A sing 242 n n NAY H26 J8A sing 243 n n NAZ H27 J8A sing 244 n n CBM H28 J8A sing 245 n n # _atom_sites.entry_id 6EGA _atom_sites.fract_transf_matrix[1][1] 0.011816 _atom_sites.fract_transf_matrix[1][2] 0.006822 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013644 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002331 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 J8A A 1 501 2 J8A DRG . D 3 SO4 A 1 502 1 SO4 SO4 . E 4 CO A 1 503 1 CO CO . F 4 CO A 1 504 2 CO CO . G 4 CO A 1 505 4 CO CO . H 4 CO A 1 506 6 CO CO . I 2 J8A B 1 501 3 J8A DRG . J 3 SO4 B 1 502 2 SO4 SO4 . K 4 CO B 1 503 3 CO CO . L 4 CO B 1 504 5 CO CO . M 5 HOH A 1 601 23 HOH HOH . M 5 HOH A 2 602 70 HOH HOH . M 5 HOH A 3 603 68 HOH HOH . M 5 HOH A 4 604 24 HOH HOH . M 5 HOH A 5 605 10 HOH HOH . M 5 HOH A 6 606 51 HOH HOH . M 5 HOH A 7 607 64 HOH HOH . M 5 HOH A 8 608 9 HOH HOH . M 5 HOH A 9 609 8 HOH HOH . M 5 HOH A 10 610 38 HOH HOH . M 5 HOH A 11 611 7 HOH HOH . M 5 HOH A 12 612 32 HOH HOH . M 5 HOH A 13 613 11 HOH HOH . M 5 HOH A 14 614 25 HOH HOH . M 5 HOH A 15 615 2 HOH HOH . M 5 HOH A 16 616 15 HOH HOH . M 5 HOH A 17 617 49 HOH HOH . M 5 HOH A 18 618 3 HOH HOH . M 5 HOH A 19 619 13 HOH HOH . M 5 HOH A 20 620 72 HOH HOH . M 5 HOH A 21 621 39 HOH HOH . M 5 HOH A 22 622 67 HOH HOH . M 5 HOH A 23 623 43 HOH HOH . M 5 HOH A 24 624 46 HOH HOH . M 5 HOH A 25 625 50 HOH HOH . N 5 HOH B 1 601 18 HOH HOH . N 5 HOH B 2 602 63 HOH HOH . N 5 HOH B 3 603 69 HOH HOH . N 5 HOH B 4 604 14 HOH HOH . N 5 HOH B 5 605 20 HOH HOH . N 5 HOH B 6 606 71 HOH HOH . N 5 HOH B 7 607 1 HOH HOH . N 5 HOH B 8 608 4 HOH HOH . N 5 HOH B 9 609 55 HOH HOH . N 5 HOH B 10 610 65 HOH HOH . N 5 HOH B 11 611 6 HOH HOH . N 5 HOH B 12 612 58 HOH HOH . N 5 HOH B 13 613 56 HOH HOH . N 5 HOH B 14 614 26 HOH HOH . N 5 HOH B 15 615 45 HOH HOH . N 5 HOH B 16 616 62 HOH HOH . N 5 HOH B 17 617 34 HOH HOH . N 5 HOH B 18 618 57 HOH HOH . N 5 HOH B 19 619 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAF J8A . . . C 2 0.502 25.926 26.206 1 75.95 ? CAF J8A 501 A 1 HETATM 2 C CAG J8A . . . C 2 1.391 26.793 25.576 1 73.73 ? CAG J8A 501 A 1 HETATM 3 C CAH J8A . . . C 2 -0.503 26.416 27.038 1 78.57 ? CAH J8A 501 A 1 HETATM 4 C CAI J8A . . . C 2 5.223 28.676 23.476 1 82.76 ? CAI J8A 501 A 1 HETATM 5 C CAJ J8A . . . C 2 6.216 29.365 22.806 1 85.62 ? CAJ J8A 501 A 1 HETATM 6 C CAK J8A . . . C 2 -1.274 29.241 29.064 1 70.98 ? CAK J8A 501 A 1 HETATM 7 C CAL J8A . . . C 2 -2.301 29.772 29.835 1 61.38 ? CAL J8A 501 A 1 HETATM 8 C CAM J8A . . . C 2 0.269 28.646 26.615 1 72.82 ? CAM J8A 501 A 1 HETATM 9 C CAN J8A . . . C 2 4.182 30.765 23.997 1 75.09 ? CAN J8A 501 A 1 HETATM 10 C CAO J8A . . . C 2 6.607 30.845 18.27 1 85.13 ? CAO J8A 501 A 1 HETATM 11 C CAP J8A . . . C 2 8.388 32.398 18.634 1 81.68 ? CAP J8A 501 A 1 HETATM 12 C CAQ J8A . . . C 2 -10.518 28.761 30.528 1 60.24 ? CAQ J8A 501 A 1 HETATM 13 C CAR J8A . . . C 2 -10.718 30.031 29.718 1 57.39 ? CAR J8A 501 A 1 HETATM 14 C CAS J8A . . . C 2 6.629 30.483 19.759 1 83.5 ? CAS J8A 501 A 1 HETATM 15 C CAT J8A . . . C 2 8.401 32.039 20.102 1 85.43 ? CAT J8A 501 A 1 HETATM 16 C CAU J8A . . . C 2 7.264 31.342 22.01 1 83.7 ? CAU J8A 501 A 1 HETATM 17 N NAV J8A . . . C 2 -4.678 29.872 30.28 1 62.68 ? NAV J8A 501 A 1 HETATM 18 N NAW J8A . . . C 2 -2.889 28.031 27.872 1 71.92 ? NAW J8A 501 A 1 HETATM 19 N NAX J8A . . . C 2 7.949 31.251 17.824 1 82.85 ? NAX J8A 501 A 1 HETATM 20 N NAY J8A . . . C 2 3.272 28.607 24.713 1 77.32 ? NAY J8A 501 A 1 HETATM 21 N NAZ J8A . . . C 2 -7.03 29.665 30.366 1 66.22 ? NAZ J8A 501 A 1 HETATM 22 O OAA J8A . . . C 2 1.731 30.256 25.136 1 69.25 ? OAA J8A 501 A 1 HETATM 23 O OAB J8A . . . C 2 -8.32 29.008 28.57 1 64.35 ? OAB J8A 501 A 1 HETATM 24 C CBB J8A . . . C 2 2.108 29.091 25.192 1 70.86 ? CBB J8A 501 A 1 HETATM 25 C CBC J8A . . . C 2 -8.197 29.468 29.705 1 67.31 ? CBC J8A 501 A 1 HETATM 26 C CBD J8A . . . C 2 4.189 29.367 24.085 1 79.64 ? CBD J8A 501 A 1 HETATM 27 C CBE J8A . . . C 2 1.268 28.161 25.79 1 71.85 ? CBE J8A 501 A 1 HETATM 28 C CBF J8A . . . C 2 -0.613 27.787 27.251 1 73.65 ? CBF J8A 501 A 1 HETATM 29 C CBG J8A . . . C 2 6.201 30.755 22.7 1 80.96 ? CBG J8A 501 A 1 HETATM 30 C CBH J8A . . . C 2 -1.601 28.339 28.064 1 72.83 ? CBH J8A 501 A 1 HETATM 31 C CBI J8A . . . C 2 -5.834 29.371 29.832 1 62.99 ? CBI J8A 501 A 1 HETATM 32 C CBJ J8A . . . C 2 5.172 31.48 23.321 1 78.83 ? CBJ J8A 501 A 1 HETATM 33 C CBK J8A . . . C 2 -3.576 29.44 29.622 1 67.47 ? CBK J8A 501 A 1 HETATM 34 C CBL J8A . . . C 2 -3.857 28.567 28.633 1 71.5 ? CBL J8A 501 A 1 HETATM 35 C CBM J8A . . . C 2 -9.445 29.834 30.517 1 61.12 ? CBM J8A 501 A 1 HETATM 36 C CBO J8A . . . C 2 5.06 32.892 23.298 1 80.52 ? CBO J8A 501 A 1 HETATM 37 N NBN J8A . . . C 2 7.07 31.632 20.575 1 83.55 ? NBN J8A 501 A 1 HETATM 38 S SBA J8A . . . C 2 -5.494 28.347 28.602 1 67.73 ? SBA J8A 501 A 1 HETATM 39 F FAC J8A . . . C 2 6.228 33.51 23.627 1 85.4 ? FAC J8A 501 A 1 HETATM 40 F FAD J8A . . . C 2 4.686 33.301 22.123 1 80.79 ? FAD J8A 501 A 1 HETATM 41 F FAE J8A . . . C 2 4.127 33.263 24.207 1 82.83 ? FAE J8A 501 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 41 #