data_6EGF
#
_model_server_result.job_id            9cVlo2ZHjYUipTb-aAfiCA 
_model_server_result.datetime_utc      '2024-12-27 08:51:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6egf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    6EGF 
#
_exptl.entry_id    6EGF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6EGF 
_cell.length_a            135.195 
_cell.length_b            135.195 
_cell.length_c            126.4 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6EGF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 158 B ASN 316 1_555 E MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
metalc ? metalc2 A OD2 ASP 171 B ASP 329 1_555 E MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? 
metalc ? metalc3 B O1G ANP . B ANP 501 1_555 E MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? 
metalc ? metalc4 B O2B ANP . B ANP 501 1_555 E MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc5 B O2A ANP . B ANP 501 1_555 E MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 13 n n 
PG O2G ANP sing 14 n n 
PG O3G ANP sing 15 n n 
PG N3B ANP sing 16 n n 
O2G HOG2 ANP sing 17 n n 
O3G HOG3 ANP sing 18 n n 
PB O1B ANP doub 19 n n 
PB O2B ANP sing 20 n n 
PB N3B ANP sing 21 n n 
PB O3A ANP sing 22 n n 
O2B HOB2 ANP sing 23 n n 
N3B HNB1 ANP sing 24 n n 
PA O1A ANP doub 25 n n 
PA O2A ANP sing 26 n n 
PA O3A ANP sing 27 n n 
PA O5' ANP sing 28 n n 
O2A HOA2 ANP sing 29 n n 
O5' C5' ANP sing 30 n n 
C5' C4' ANP sing 31 n n 
C5' "H5'1" ANP sing 32 n n 
C5' "H5'2" ANP sing 33 n n 
C4' O4' ANP sing 34 n n 
C4' C3' ANP sing 35 n n 
C4' H4' ANP sing 36 n n 
O4' C1' ANP sing 37 n n 
C3' O3' ANP sing 38 n n 
C3' C2' ANP sing 39 n n 
C3' H3' ANP sing 40 n n 
O3' HO3' ANP sing 41 n n 
C2' O2' ANP sing 42 n n 
C2' C1' ANP sing 43 n n 
C2' H2' ANP sing 44 n n 
O2' HO2' ANP sing 45 n n 
C1' N9 ANP sing 46 n n 
C1' H1' ANP sing 47 n n 
N9 C8 ANP sing 48 n y 
N9 C4 ANP sing 49 n y 
C8 N7 ANP doub 50 n y 
C8 H8 ANP sing 51 n n 
N7 C5 ANP sing 52 n y 
C5 C6 ANP sing 53 n y 
C5 C4 ANP doub 54 n y 
C6 N6 ANP sing 55 n n 
C6 N1 ANP doub 56 n y 
N6 HN61 ANP sing 57 n n 
N6 HN62 ANP sing 58 n n 
N1 C2 ANP sing 59 n y 
C2 N3 ANP doub 60 n y 
C2 H2 ANP sing 61 n n 
N3 C4 ANP sing 62 n y 
#
_atom_sites.entry_id                     6EGF 
_atom_sites.fract_transf_matrix[1][1]    0.007397 
_atom_sites.fract_transf_matrix[1][2]    0.004271 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008541 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007911 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ANP B 1 501 1 ANP ANP . 
C 3 SO4 B 1 502 2 SO4 SO4 . 
D 3 SO4 B 1 503 3 SO4 SO4 . 
E 4 MG B 1 504 1 MG MG . 
F 5 HOH B 1 601 2 HOH HOH . 
F 5 HOH B 2 602 4 HOH HOH . 
F 5 HOH B 3 603 3 HOH HOH . 
F 5 HOH B 4 604 12 HOH HOH . 
F 5 HOH B 5 605 18 HOH HOH . 
F 5 HOH B 6 606 20 HOH HOH . 
F 5 HOH B 7 607 45 HOH HOH . 
F 5 HOH B 8 608 1 HOH HOH . 
F 5 HOH B 9 609 9 HOH HOH . 
F 5 HOH B 10 610 13 HOH HOH . 
F 5 HOH B 11 611 25 HOH HOH . 
F 5 HOH B 12 612 6 HOH HOH . 
F 5 HOH B 13 613 46 HOH HOH . 
F 5 HOH B 14 614 28 HOH HOH . 
F 5 HOH B 15 615 29 HOH HOH . 
F 5 HOH B 16 616 10 HOH HOH . 
F 5 HOH B 17 617 50 HOH HOH . 
F 5 HOH B 18 618 31 HOH HOH . 
F 5 HOH B 19 619 30 HOH HOH . 
F 5 HOH B 20 620 17 HOH HOH . 
F 5 HOH B 21 621 22 HOH HOH . 
F 5 HOH B 22 622 33 HOH HOH . 
F 5 HOH B 23 623 19 HOH HOH . 
F 5 HOH B 24 624 11 HOH HOH . 
F 5 HOH B 25 625 14 HOH HOH . 
F 5 HOH B 26 626 26 HOH HOH . 
F 5 HOH B 27 627 48 HOH HOH . 
F 5 HOH B 28 628 7 HOH HOH . 
F 5 HOH B 29 629 5 HOH HOH . 
F 5 HOH B 30 630 42 HOH HOH . 
F 5 HOH B 31 631 21 HOH HOH . 
F 5 HOH B 32 632 36 HOH HOH . 
F 5 HOH B 33 633 44 HOH HOH . 
F 5 HOH B 34 634 32 HOH HOH . 
F 5 HOH B 35 635 39 HOH HOH . 
F 5 HOH B 36 636 51 HOH HOH . 
F 5 HOH B 37 637 38 HOH HOH . 
F 5 HOH B 38 638 27 HOH HOH . 
F 5 HOH B 39 639 40 HOH HOH . 
F 5 HOH B 40 640 23 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ANP . . . B 2 67.035 -10.186 -10.288 1 76.61 ? PG ANP 501 B 1 
HETATM 2 O O1G ANP . . . B 2 66.59 -11.622 -10.784 1 97.17 ? O1G ANP 501 B 1 
HETATM 3 O O2G ANP . . . B 2 66.031 -9.692 -9.178 1 72.07 ? O2G ANP 501 B 1 
HETATM 4 O O3G ANP . . . B 2 68.419 -10.26 -9.723 1 66.16 ? O3G ANP 501 B 1 
HETATM 5 P PB ANP . . . B 2 67.064 -9.888 -13.057 1 80.88 ? PB ANP 501 B 1 
HETATM 6 O O1B ANP . . . B 2 66.39 -8.989 -14.132 1 78.34 ? O1B ANP 501 B 1 
HETATM 7 O O2B ANP . . . B 2 66.303 -11.17 -12.967 1 77.39 ? O2B ANP 501 B 1 
HETATM 8 N N3B ANP . . . B 2 67.012 -9.093 -11.58 1 84.58 ? N3B ANP 501 B 1 
HETATM 9 P PA ANP . . . B 2 69.334 -11.498 -13.204 1 74.58 ? PA ANP 501 B 1 
HETATM 10 O O1A ANP . . . B 2 70.688 -11.118 -12.598 1 83.96 ? O1A ANP 501 B 1 
HETATM 11 O O2A ANP . . . B 2 68.581 -12.442 -12.346 1 54.01 ? O2A ANP 501 B 1 
HETATM 12 O O3A ANP . . . B 2 68.554 -10.132 -13.464 1 73.17 ? O3A ANP 501 B 1 
HETATM 13 O O5' ANP . . . B 2 69.522 -12.148 -14.632 1 73.59 ? O5' ANP 501 B 1 
HETATM 14 C C5' ANP . . . B 2 70.135 -11.419 -15.719 1 70.21 ? C5' ANP 501 B 1 
HETATM 15 C C4' ANP . . . B 2 69.397 -11.701 -17.007 1 73.47 ? C4' ANP 501 B 1 
HETATM 16 O O4' ANP . . . B 2 69.637 -13.066 -17.419 1 72.71 ? O4' ANP 501 B 1 
HETATM 17 C C3' ANP . . . B 2 67.879 -11.539 -16.953 1 75.39 ? C3' ANP 501 B 1 
HETATM 18 O O3' ANP . . . B 2 67.376 -11.048 -18.19 1 74.02 ? O3' ANP 501 B 1 
HETATM 19 C C2' ANP . . . B 2 67.396 -12.962 -16.672 1 71.45 ? C2' ANP 501 B 1 
HETATM 20 O O2' ANP . . . B 2 66.08 -13.179 -17.167 1 71.25 ? O2' ANP 501 B 1 
HETATM 21 C C1' ANP . . . B 2 68.424 -13.794 -17.443 1 68.69 ? C1' ANP 501 B 1 
HETATM 22 N N9 ANP . . . B 2 68.672 -15.11 -16.864 1 75.83 ? N9 ANP 501 B 1 
HETATM 23 C C8 ANP . . . B 2 68.898 -15.404 -15.545 1 72.21 ? C8 ANP 501 B 1 
HETATM 24 N N7 ANP . . . B 2 69.096 -16.678 -15.307 1 71.05 ? N7 ANP 501 B 1 
HETATM 25 C C5 ANP . . . B 2 69 -17.264 -16.561 1 75.11 ? C5 ANP 501 B 1 
HETATM 26 C C6 ANP . . . B 2 69.113 -18.599 -16.995 1 69.95 ? C6 ANP 501 B 1 
HETATM 27 N N6 ANP . . . B 2 69.357 -19.628 -16.18 1 59.16 ? N6 ANP 501 B 1 
HETATM 28 N N1 ANP . . . B 2 68.959 -18.844 -18.316 1 68.84 ? N1 ANP 501 B 1 
HETATM 29 C C2 ANP . . . B 2 68.711 -17.819 -19.136 1 62.31 ? C2 ANP 501 B 1 
HETATM 30 N N3 ANP . . . B 2 68.583 -16.523 -18.842 1 70.58 ? N3 ANP 501 B 1 
HETATM 31 C C4 ANP . . . B 2 68.738 -16.31 -17.529 1 77.65 ? C4 ANP 501 B 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           31 
#