data_6EGF # _model_server_result.job_id ofb0bBWWmC1K6G9mPqzvcQ _model_server_result.datetime_utc '2024-12-05 06:33:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6egf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 6EGF # _exptl.entry_id 6EGF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6EGF _cell.length_a 135.195 _cell.length_b 135.195 _cell.length_c 126.4 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EGF _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 158 B ASN 316 1_555 E MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc2 A OD2 ASP 171 B ASP 329 1_555 E MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc3 B O1G ANP . B ANP 501 1_555 E MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc4 B O2B ANP . B ANP 501 1_555 E MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc5 B O2A ANP . B ANP 501 1_555 E MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6EGF _atom_sites.fract_transf_matrix[1][1] 0.007397 _atom_sites.fract_transf_matrix[1][2] 0.004271 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008541 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007911 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP B 1 501 1 ANP ANP . C 3 SO4 B 1 502 2 SO4 SO4 . D 3 SO4 B 1 503 3 SO4 SO4 . E 4 MG B 1 504 1 MG MG . F 5 HOH B 1 601 2 HOH HOH . F 5 HOH B 2 602 4 HOH HOH . F 5 HOH B 3 603 3 HOH HOH . F 5 HOH B 4 604 12 HOH HOH . F 5 HOH B 5 605 18 HOH HOH . F 5 HOH B 6 606 20 HOH HOH . F 5 HOH B 7 607 45 HOH HOH . F 5 HOH B 8 608 1 HOH HOH . F 5 HOH B 9 609 9 HOH HOH . F 5 HOH B 10 610 13 HOH HOH . F 5 HOH B 11 611 25 HOH HOH . F 5 HOH B 12 612 6 HOH HOH . F 5 HOH B 13 613 46 HOH HOH . F 5 HOH B 14 614 28 HOH HOH . F 5 HOH B 15 615 29 HOH HOH . F 5 HOH B 16 616 10 HOH HOH . F 5 HOH B 17 617 50 HOH HOH . F 5 HOH B 18 618 31 HOH HOH . F 5 HOH B 19 619 30 HOH HOH . F 5 HOH B 20 620 17 HOH HOH . F 5 HOH B 21 621 22 HOH HOH . F 5 HOH B 22 622 33 HOH HOH . F 5 HOH B 23 623 19 HOH HOH . F 5 HOH B 24 624 11 HOH HOH . F 5 HOH B 25 625 14 HOH HOH . F 5 HOH B 26 626 26 HOH HOH . F 5 HOH B 27 627 48 HOH HOH . F 5 HOH B 28 628 7 HOH HOH . F 5 HOH B 29 629 5 HOH HOH . F 5 HOH B 30 630 42 HOH HOH . F 5 HOH B 31 631 21 HOH HOH . F 5 HOH B 32 632 36 HOH HOH . F 5 HOH B 33 633 44 HOH HOH . F 5 HOH B 34 634 32 HOH HOH . F 5 HOH B 35 635 39 HOH HOH . F 5 HOH B 36 636 51 HOH HOH . F 5 HOH B 37 637 38 HOH HOH . F 5 HOH B 38 638 27 HOH HOH . F 5 HOH B 39 639 40 HOH HOH . F 5 HOH B 40 640 23 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 66.384 _atom_site.Cartn_y -13.174 _atom_site.Cartn_z -12.396 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 76.12 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 504 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #