data_6EH7 # _model_server_result.job_id uNIrlHAGwylDG3uf4fIvZw _model_server_result.datetime_utc '2024-10-10 10:27:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eh7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":305}' # _entry.id 6EH7 # _exptl.entry_id 6EH7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EH7 _cell.length_a 85.42 _cell.length_b 114.48 _cell.length_c 50.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EH7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf2 A SG CYS 135 A CYS 135 1_555 A SG CYS 185 A CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? disulf ? disulf3 A SG CYS 160 A CYS 160 1_555 B SG CYS 167 B CYS 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf4 B SG CYS 22 B CYS 22 1_555 B SG CYS 90 B CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? disulf ? disulf5 B SG CYS 141 B CYS 141 1_555 B SG CYS 206 B CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6EH7 _atom_sites.fract_transf_matrix[1][1] 0.011707 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008735 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019751 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 301 301 EDO EDO . D 3 EDO A 1 302 302 EDO EDO . E 3 EDO A 1 303 304 EDO EDO . F 3 EDO A 1 304 305 EDO EDO . G 3 EDO A 1 305 306 EDO EDO . H 3 EDO A 1 306 309 EDO EDO . I 3 EDO A 1 307 312 EDO EDO . J 4 PEG A 1 308 321 PEG PEG . K 3 EDO B 1 301 303 EDO EDO . L 3 EDO B 1 302 307 EDO EDO . M 3 EDO B 1 303 311 EDO EDO . N 3 EDO B 1 304 313 EDO EDO . O 3 EDO B 1 305 314 EDO EDO . P 4 PEG B 1 306 322 PEG PEG . Q 5 HOH A 1 401 530 HOH HOH . Q 5 HOH A 2 402 569 HOH HOH . Q 5 HOH A 3 403 401 HOH HOH . Q 5 HOH A 4 404 544 HOH HOH . Q 5 HOH A 5 405 556 HOH HOH . Q 5 HOH A 6 406 439 HOH HOH . Q 5 HOH A 7 407 545 HOH HOH . Q 5 HOH A 8 408 500 HOH HOH . Q 5 HOH A 9 409 421 HOH HOH . Q 5 HOH A 10 410 541 HOH HOH . Q 5 HOH A 11 411 551 HOH HOH . Q 5 HOH A 12 412 448 HOH HOH . Q 5 HOH A 13 413 579 HOH HOH . Q 5 HOH A 14 414 442 HOH HOH . Q 5 HOH A 15 415 411 HOH HOH . Q 5 HOH A 16 416 568 HOH HOH . Q 5 HOH A 17 417 427 HOH HOH . Q 5 HOH A 18 418 523 HOH HOH . Q 5 HOH A 19 419 478 HOH HOH . Q 5 HOH A 20 420 564 HOH HOH . Q 5 HOH A 21 421 493 HOH HOH . Q 5 HOH A 22 422 452 HOH HOH . Q 5 HOH A 23 423 491 HOH HOH . Q 5 HOH A 24 424 432 HOH HOH . Q 5 HOH A 25 425 502 HOH HOH . Q 5 HOH A 26 426 417 HOH HOH . Q 5 HOH A 27 427 409 HOH HOH . Q 5 HOH A 28 428 408 HOH HOH . Q 5 HOH A 29 429 504 HOH HOH . Q 5 HOH A 30 430 419 HOH HOH . Q 5 HOH A 31 431 447 HOH HOH . Q 5 HOH A 32 432 525 HOH HOH . Q 5 HOH A 33 433 492 HOH HOH . Q 5 HOH A 34 434 477 HOH HOH . Q 5 HOH A 35 435 548 HOH HOH . Q 5 HOH A 36 436 511 HOH HOH . Q 5 HOH A 37 437 437 HOH HOH . Q 5 HOH A 38 438 528 HOH HOH . Q 5 HOH A 39 439 404 HOH HOH . Q 5 HOH A 40 440 560 HOH HOH . Q 5 HOH A 41 441 524 HOH HOH . Q 5 HOH A 42 442 457 HOH HOH . Q 5 HOH A 43 443 423 HOH HOH . Q 5 HOH A 44 444 509 HOH HOH . Q 5 HOH A 45 445 483 HOH HOH . Q 5 HOH A 46 446 402 HOH HOH . Q 5 HOH A 47 447 536 HOH HOH . Q 5 HOH A 48 448 490 HOH HOH . Q 5 HOH A 49 449 413 HOH HOH . Q 5 HOH A 50 450 435 HOH HOH . Q 5 HOH A 51 451 554 HOH HOH . Q 5 HOH A 52 452 441 HOH HOH . Q 5 HOH A 53 453 473 HOH HOH . Q 5 HOH A 54 454 461 HOH HOH . Q 5 HOH A 55 455 412 HOH HOH . Q 5 HOH A 56 456 489 HOH HOH . Q 5 HOH A 57 457 562 HOH HOH . Q 5 HOH A 58 458 496 HOH HOH . Q 5 HOH A 59 459 403 HOH HOH . Q 5 HOH A 60 460 585 HOH HOH . Q 5 HOH A 61 461 428 HOH HOH . Q 5 HOH A 62 462 547 HOH HOH . Q 5 HOH A 63 463 538 HOH HOH . Q 5 HOH A 64 464 466 HOH HOH . Q 5 HOH A 65 465 429 HOH HOH . Q 5 HOH A 66 466 433 HOH HOH . Q 5 HOH A 67 467 418 HOH HOH . Q 5 HOH A 68 468 576 HOH HOH . Q 5 HOH A 69 469 521 HOH HOH . Q 5 HOH A 70 470 580 HOH HOH . Q 5 HOH A 71 471 519 HOH HOH . Q 5 HOH A 72 472 565 HOH HOH . Q 5 HOH A 73 473 557 HOH HOH . Q 5 HOH A 74 474 455 HOH HOH . Q 5 HOH A 75 475 460 HOH HOH . Q 5 HOH A 76 476 546 HOH HOH . Q 5 HOH A 77 477 482 HOH HOH . Q 5 HOH A 78 478 571 HOH HOH . Q 5 HOH A 79 479 517 HOH HOH . R 5 HOH B 1 401 595 HOH HOH . R 5 HOH B 2 402 479 HOH HOH . R 5 HOH B 3 403 567 HOH HOH . R 5 HOH B 4 404 422 HOH HOH . R 5 HOH B 5 405 529 HOH HOH . R 5 HOH B 6 406 566 HOH HOH . R 5 HOH B 7 407 573 HOH HOH . R 5 HOH B 8 408 575 HOH HOH . R 5 HOH B 9 409 481 HOH HOH . R 5 HOH B 10 410 458 HOH HOH . R 5 HOH B 11 411 515 HOH HOH . R 5 HOH B 12 412 443 HOH HOH . R 5 HOH B 13 413 552 HOH HOH . R 5 HOH B 14 414 499 HOH HOH . R 5 HOH B 15 415 469 HOH HOH . R 5 HOH B 16 416 415 HOH HOH . R 5 HOH B 17 417 488 HOH HOH . R 5 HOH B 18 418 430 HOH HOH . R 5 HOH B 19 419 407 HOH HOH . R 5 HOH B 20 420 594 HOH HOH . R 5 HOH B 21 421 487 HOH HOH . R 5 HOH B 22 422 539 HOH HOH . R 5 HOH B 23 423 454 HOH HOH . R 5 HOH B 24 424 526 HOH HOH . R 5 HOH B 25 425 414 HOH HOH . R 5 HOH B 26 426 410 HOH HOH . R 5 HOH B 27 427 581 HOH HOH . R 5 HOH B 28 428 540 HOH HOH . R 5 HOH B 29 429 555 HOH HOH . R 5 HOH B 30 430 405 HOH HOH . R 5 HOH B 31 431 444 HOH HOH . R 5 HOH B 32 432 472 HOH HOH . R 5 HOH B 33 433 486 HOH HOH . R 5 HOH B 34 434 537 HOH HOH . R 5 HOH B 35 435 503 HOH HOH . R 5 HOH B 36 436 420 HOH HOH . R 5 HOH B 37 437 543 HOH HOH . R 5 HOH B 38 438 456 HOH HOH . R 5 HOH B 39 439 440 HOH HOH . R 5 HOH B 40 440 578 HOH HOH . R 5 HOH B 41 441 406 HOH HOH . R 5 HOH B 42 442 425 HOH HOH . R 5 HOH B 43 443 459 HOH HOH . R 5 HOH B 44 444 507 HOH HOH . R 5 HOH B 45 445 450 HOH HOH . R 5 HOH B 46 446 463 HOH HOH . R 5 HOH B 47 447 542 HOH HOH . R 5 HOH B 48 448 474 HOH HOH . R 5 HOH B 49 449 593 HOH HOH . R 5 HOH B 50 450 438 HOH HOH . R 5 HOH B 51 451 531 HOH HOH . R 5 HOH B 52 452 513 HOH HOH . R 5 HOH B 53 453 563 HOH HOH . R 5 HOH B 54 454 446 HOH HOH . R 5 HOH B 55 455 520 HOH HOH . R 5 HOH B 56 456 506 HOH HOH . R 5 HOH B 57 457 510 HOH HOH . R 5 HOH B 58 458 501 HOH HOH . R 5 HOH B 59 459 475 HOH HOH . R 5 HOH B 60 460 505 HOH HOH . R 5 HOH B 61 461 416 HOH HOH . R 5 HOH B 62 462 498 HOH HOH . R 5 HOH B 63 463 480 HOH HOH . R 5 HOH B 64 464 561 HOH HOH . R 5 HOH B 65 465 508 HOH HOH . R 5 HOH B 66 466 467 HOH HOH . R 5 HOH B 67 467 532 HOH HOH . R 5 HOH B 68 468 451 HOH HOH . R 5 HOH B 69 469 462 HOH HOH . R 5 HOH B 70 470 431 HOH HOH . R 5 HOH B 71 471 468 HOH HOH . R 5 HOH B 72 472 465 HOH HOH . R 5 HOH B 73 473 591 HOH HOH . R 5 HOH B 74 474 550 HOH HOH . R 5 HOH B 75 475 514 HOH HOH . R 5 HOH B 76 476 449 HOH HOH . R 5 HOH B 77 477 424 HOH HOH . R 5 HOH B 78 478 426 HOH HOH . R 5 HOH B 79 479 470 HOH HOH . R 5 HOH B 80 480 574 HOH HOH . R 5 HOH B 81 481 484 HOH HOH . R 5 HOH B 82 482 559 HOH HOH . R 5 HOH B 83 483 582 HOH HOH . R 5 HOH B 84 484 590 HOH HOH . R 5 HOH B 85 485 587 HOH HOH . R 5 HOH B 86 486 518 HOH HOH . R 5 HOH B 87 487 453 HOH HOH . R 5 HOH B 88 488 592 HOH HOH . R 5 HOH B 89 489 577 HOH HOH . R 5 HOH B 90 490 497 HOH HOH . R 5 HOH B 91 491 476 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . O 3 -8.835 6.253 -33.784 1 55.5 ? C1 EDO 305 B 1 HETATM 2 O O1 EDO . . . O 3 -8.723 5.611 -32.511 1 49.01 ? O1 EDO 305 B 1 HETATM 3 C C2 EDO . . . O 3 -8.188 7.629 -33.708 1 53.01 ? C2 EDO 305 B 1 HETATM 4 O O2 EDO . . . O 3 -9.058 8.567 -33.062 1 47.2 ? O2 EDO 305 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 43 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #