data_6EIA # _model_server_result.job_id PE_AMGBDQWbr-tqyn3ehFQ _model_server_result.datetime_utc '2024-11-05 08:36:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eia # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":521}' # _entry.id 6EIA # _exptl.entry_id 6EIA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.46 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EIA _cell.length_a 102.49 _cell.length_b 110.03 _cell.length_c 110.56 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EIA _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 M N N ? 6 U N N ? 6 V N N ? 6 X N N # _chem_comp.formula 'C18 H34 O4' _chem_comp.formula_weight 314.46 _chem_comp.id 78M _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '7.8 MONOACYLGLYCEROL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O21 C20 78M sing 1 n n C20 C18 78M sing 2 n n C18 O19 78M sing 3 n n C18 C17 78M sing 4 n n C17 O2 78M sing 5 n n O2 C1 78M sing 6 n n C1 O1 78M doub 7 n n C1 C2 78M sing 8 n n C2 C3 78M sing 9 n n C3 C4 78M sing 10 n n C4 C5 78M sing 11 n n C5 C6 78M sing 12 n n C6 C7 78M sing 13 n n C7 C8 78M doub 14 z n C8 C9 78M sing 15 n n C9 C10 78M sing 16 n n C10 C11 78M sing 17 n n C11 C12 78M sing 18 n n C12 C13 78M sing 19 n n C15 C14 78M sing 20 n n C13 C14 78M sing 21 n n O21 H21 78M sing 22 n n C20 H201 78M sing 23 n n C20 H202 78M sing 24 n n C18 H18 78M sing 25 n n O19 H19 78M sing 26 n n C17 H171 78M sing 27 n n C17 H172 78M sing 28 n n C2 H21C 78M sing 29 n n C2 H22C 78M sing 30 n n C3 H31C 78M sing 31 n n C3 H32C 78M sing 32 n n C4 H41C 78M sing 33 n n C4 H42C 78M sing 34 n n C5 H51C 78M sing 35 n n C5 H52C 78M sing 36 n n C6 H61C 78M sing 37 n n C6 H62C 78M sing 38 n n C7 H7 78M sing 39 n n C8 H8 78M sing 40 n n C9 H91C 78M sing 41 n n C9 H92C 78M sing 42 n n C10 H101 78M sing 43 n n C10 H102 78M sing 44 n n C11 H111 78M sing 45 n n C11 H112 78M sing 46 n n C12 H121 78M sing 47 n n C12 H122 78M sing 48 n n C13 H131 78M sing 49 n n C13 H132 78M sing 50 n n C15 H151 78M sing 51 n n C15 H152 78M sing 52 n n C15 H153 78M sing 53 n n C14 H141 78M sing 54 n n C14 H142 78M sing 55 n n # _atom_sites.entry_id 6EIA _atom_sites.fract_transf_matrix[1][1] 0.009757 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009088 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 501 1 PO4 PO4 . C 2 PO4 A 1 502 2 PO4 PO4 . D 2 PO4 A 1 503 3 PO4 PO4 . E 2 PO4 A 1 504 4 PO4 PO4 . F 3 PG4 A 1 505 5 PG4 1PE . G 4 EPE A 1 506 6 EPE EPE . H 4 EPE A 1 507 7 EPE EPE . I 5 78N A 1 508 1 78N 78N . J 6 78M A 1 509 2 78M 78M . K 5 78N A 1 510 3 78N 78N . L 5 78N A 1 511 4 78N 78N . M 6 78M A 1 512 5 78M 78M . N 5 78N A 1 513 6 78N 78N . O 5 78N A 1 514 7 78N 78N . P 5 78N A 1 515 8 78N 78N . Q 5 78N A 1 516 9 78N 78N . R 5 78N A 1 517 10 78N 78N . S 5 78N A 1 518 11 78N 78N . T 5 78N A 1 519 12 78N 78N . U 6 78M A 1 520 13 78M 78M . V 6 78M A 1 521 14 78M 78M . W 5 78N A 1 522 15 78N 78N . X 6 78M A 1 523 16 78M 78M . Y 5 78N A 1 524 17 78N 78N . Z 5 78N A 1 525 18 78N 78N . AA 7 HOH A 1 601 79 HOH HOH . AA 7 HOH A 2 602 118 HOH HOH . AA 7 HOH A 3 603 116 HOH HOH . AA 7 HOH A 4 604 46 HOH HOH . AA 7 HOH A 5 605 28 HOH HOH . AA 7 HOH A 6 606 77 HOH HOH . AA 7 HOH A 7 607 117 HOH HOH . AA 7 HOH A 8 608 49 HOH HOH . AA 7 HOH A 9 609 18 HOH HOH . AA 7 HOH A 10 610 25 HOH HOH . AA 7 HOH A 11 611 30 HOH HOH . AA 7 HOH A 12 612 7 HOH HOH . AA 7 HOH A 13 613 68 HOH HOH . AA 7 HOH A 14 614 106 HOH HOH . AA 7 HOH A 15 615 33 HOH HOH . AA 7 HOH A 16 616 88 HOH HOH . AA 7 HOH A 17 617 6 HOH HOH . AA 7 HOH A 18 618 54 HOH HOH . AA 7 HOH A 19 619 100 HOH HOH . AA 7 HOH A 20 620 10 HOH HOH . AA 7 HOH A 21 621 20 HOH HOH . AA 7 HOH A 22 622 122 HOH HOH . AA 7 HOH A 23 623 21 HOH HOH . AA 7 HOH A 24 624 1 HOH HOH . AA 7 HOH A 25 625 4 HOH HOH . AA 7 HOH A 26 626 92 HOH HOH . AA 7 HOH A 27 627 95 HOH HOH . AA 7 HOH A 28 628 120 HOH HOH . AA 7 HOH A 29 629 11 HOH HOH . AA 7 HOH A 30 630 8 HOH HOH . AA 7 HOH A 31 631 9 HOH HOH . AA 7 HOH A 32 632 58 HOH HOH . AA 7 HOH A 33 633 24 HOH HOH . AA 7 HOH A 34 634 37 HOH HOH . AA 7 HOH A 35 635 13 HOH HOH . AA 7 HOH A 36 636 103 HOH HOH . AA 7 HOH A 37 637 31 HOH HOH . AA 7 HOH A 38 638 5 HOH HOH . AA 7 HOH A 39 639 82 HOH HOH . AA 7 HOH A 40 640 41 HOH HOH . AA 7 HOH A 41 641 71 HOH HOH . AA 7 HOH A 42 642 83 HOH HOH . AA 7 HOH A 43 643 38 HOH HOH . AA 7 HOH A 44 644 112 HOH HOH . AA 7 HOH A 45 645 62 HOH HOH . AA 7 HOH A 46 646 16 HOH HOH . AA 7 HOH A 47 647 45 HOH HOH . AA 7 HOH A 48 648 78 HOH HOH . AA 7 HOH A 49 649 23 HOH HOH . AA 7 HOH A 50 650 81 HOH HOH . AA 7 HOH A 51 651 56 HOH HOH . AA 7 HOH A 52 652 61 HOH HOH . AA 7 HOH A 53 653 29 HOH HOH . AA 7 HOH A 54 654 63 HOH HOH . AA 7 HOH A 55 655 96 HOH HOH . AA 7 HOH A 56 656 42 HOH HOH . AA 7 HOH A 57 657 121 HOH HOH . AA 7 HOH A 58 658 14 HOH HOH . AA 7 HOH A 59 659 104 HOH HOH . AA 7 HOH A 60 660 3 HOH HOH . AA 7 HOH A 61 661 89 HOH HOH . AA 7 HOH A 62 662 65 HOH HOH . AA 7 HOH A 63 663 75 HOH HOH . AA 7 HOH A 64 664 55 HOH HOH . AA 7 HOH A 65 665 26 HOH HOH . AA 7 HOH A 66 666 67 HOH HOH . AA 7 HOH A 67 667 57 HOH HOH . AA 7 HOH A 68 668 84 HOH HOH . AA 7 HOH A 69 669 64 HOH HOH . AA 7 HOH A 70 670 40 HOH HOH . AA 7 HOH A 71 671 69 HOH HOH . AA 7 HOH A 72 672 12 HOH HOH . AA 7 HOH A 73 673 52 HOH HOH . AA 7 HOH A 74 674 73 HOH HOH . AA 7 HOH A 75 675 105 HOH HOH . AA 7 HOH A 76 676 114 HOH HOH . AA 7 HOH A 77 677 59 HOH HOH . AA 7 HOH A 78 678 43 HOH HOH . AA 7 HOH A 79 679 36 HOH HOH . AA 7 HOH A 80 680 70 HOH HOH . AA 7 HOH A 81 681 39 HOH HOH . AA 7 HOH A 82 682 50 HOH HOH . AA 7 HOH A 83 683 32 HOH HOH . AA 7 HOH A 84 684 2 HOH HOH . AA 7 HOH A 85 685 80 HOH HOH . AA 7 HOH A 86 686 74 HOH HOH . AA 7 HOH A 87 687 85 HOH HOH . AA 7 HOH A 88 688 72 HOH HOH . AA 7 HOH A 89 689 48 HOH HOH . AA 7 HOH A 90 690 110 HOH HOH . AA 7 HOH A 91 691 115 HOH HOH . AA 7 HOH A 92 692 15 HOH HOH . AA 7 HOH A 93 693 119 HOH HOH . AA 7 HOH A 94 694 111 HOH HOH . AA 7 HOH A 95 695 35 HOH HOH . AA 7 HOH A 96 696 34 HOH HOH . AA 7 HOH A 97 697 107 HOH HOH . AA 7 HOH A 98 698 19 HOH HOH . AA 7 HOH A 99 699 22 HOH HOH . AA 7 HOH A 100 700 93 HOH HOH . AA 7 HOH A 101 701 44 HOH HOH . AA 7 HOH A 102 702 51 HOH HOH . AA 7 HOH A 103 703 53 HOH HOH . AA 7 HOH A 104 704 113 HOH HOH . AA 7 HOH A 105 705 17 HOH HOH . AA 7 HOH A 106 706 86 HOH HOH . AA 7 HOH A 107 707 97 HOH HOH . AA 7 HOH A 108 708 60 HOH HOH . AA 7 HOH A 109 709 47 HOH HOH . AA 7 HOH A 110 710 91 HOH HOH . AA 7 HOH A 111 711 94 HOH HOH . AA 7 HOH A 112 712 102 HOH HOH . AA 7 HOH A 113 713 98 HOH HOH . AA 7 HOH A 114 714 27 HOH HOH . AA 7 HOH A 115 715 108 HOH HOH . AA 7 HOH A 116 716 66 HOH HOH . AA 7 HOH A 117 717 87 HOH HOH . AA 7 HOH A 118 718 90 HOH HOH . AA 7 HOH A 119 719 76 HOH HOH . AA 7 HOH A 120 720 109 HOH HOH . AA 7 HOH A 121 721 99 HOH HOH . AA 7 HOH A 122 722 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O21 78M . . . V 6 -48.918 -4.533 -15.215 0.97 93.1 ? O21 78M 521 A 1 HETATM 2 C C20 78M . . . V 6 -49.265 -3.131 -15.106 0.97 92.7 ? C20 78M 521 A 1 HETATM 3 C C18 78M . . . V 6 -48.606 -2.533 -13.861 0.97 94.01 ? C18 78M 521 A 1 HETATM 4 O O19 78M . . . V 6 -48.061 -1.307 -14.186 0.97 95.17 ? O19 78M 521 A 1 HETATM 5 C C17 78M . . . V 6 -47.523 -3.461 -13.347 0.97 93.01 ? C17 78M 521 A 1 HETATM 6 O O2 78M . . . V 6 -47.149 -3.078 -12.04 0.97 92.27 ? O2 78M 521 A 1 HETATM 7 C C1 78M . . . V 6 -45.865 -3.543 -11.626 0.97 90.48 ? C1 78M 521 A 1 HETATM 8 O O1 78M . . . V 6 -45.396 -4.575 -12.111 0.97 94.31 ? O1 78M 521 A 1 HETATM 9 C C2 78M . . . V 6 -45.059 -2.752 -10.567 0.97 85.86 ? C2 78M 521 A 1 HETATM 10 C C3 78M . . . V 6 -43.708 -3.412 -10.338 0.97 82.71 ? C3 78M 521 A 1 HETATM 11 C C4 78M . . . V 6 -43.537 -3.736 -8.816 0.97 65.59 ? C4 78M 521 A 1 HETATM 12 C C5 78M . . . V 6 -44.115 -5.12 -8.523 0.97 66.93 ? C5 78M 521 A 1 HETATM 13 C C6 78M . . . V 6 -44.807 -5.105 -7.159 0.97 69.99 ? C6 78M 521 A 1 HETATM 14 C C7 78M . . . V 6 -45.457 -6.494 -6.902 0.97 104.4 ? C7 78M 521 A 1 HETATM 15 C C8 78M . . . V 6 -46.588 -6.6 -6.112 0.97 105.75 ? C8 78M 521 A 1 HETATM 16 C C9 78M . . . V 6 -47.212 -5.391 -5.494 0.97 106.57 ? C9 78M 521 A 1 HETATM 17 C C10 78M . . . V 6 -48.34 -5.86 -4.529 0.97 100.64 ? C10 78M 521 A 1 HETATM 18 C C11 78M . . . V 6 -47.838 -7.11 -3.721 0.97 117.11 ? C11 78M 521 A 1 HETATM 19 C C12 78M . . . V 6 -48.597 -7.212 -2.387 0.97 117.01 ? C12 78M 521 A 1 HETATM 20 C C13 78M . . . V 6 -47.6 -7.636 -1.246 0.97 80.16 ? C13 78M 521 A 1 HETATM 21 C C15 78M . . . V 6 -49.366 -8.356 0.39 0.97 79.42 ? C15 78M 521 A 1 HETATM 22 C C14 78M . . . V 6 -48.243 -7.344 0.123 0.97 80.38 ? C14 78M 521 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 381 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 22 #