data_6EIA # _model_server_result.job_id BDJM5v1ZTBC5uswMCC4Rfg _model_server_result.datetime_utc '2024-11-23 17:41:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eia # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":524}' # _entry.id 6EIA # _exptl.entry_id 6EIA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.46 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EIA _cell.length_a 102.49 _cell.length_b 110.03 _cell.length_c 110.56 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EIA _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 K N N ? 5 L N N ? 5 N N N ? 5 O N N ? 5 P N N ? 5 Q N N ? 5 R N N ? 5 S N N ? 5 T N N ? 5 W N N ? 5 Y N N ? 5 Z N N # _chem_comp.formula 'C18 H34 O4' _chem_comp.formula_weight 314.46 _chem_comp.id 78N _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '7.8 MONOACYLGLYCEROL (2R)' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C19 78N sing 56 n n C19 C18 78N sing 57 n n C18 O20 78N sing 58 n n C18 C17 78N sing 59 n n C17 O16 78N sing 60 n n O16 C8 78N sing 61 n n C8 O15 78N doub 62 n n C8 C7 78N sing 63 n n C7 C6 78N sing 64 n n C6 C5 78N sing 65 n n C5 C4 78N sing 66 n n C4 C3 78N sing 67 n n C3 C2 78N sing 68 n n C2 C1 78N doub 69 z n C1 C9 78N sing 70 n n C9 C10 78N sing 71 n n C10 C11 78N sing 72 n n C11 C12 78N sing 73 n n C12 C13 78N sing 74 n n C13 C14 78N sing 75 n n C15 C14 78N sing 76 n n O22 H22 78N sing 77 n n C19 H191 78N sing 78 n n C19 H192 78N sing 79 n n C18 H18 78N sing 80 n n O20 H20 78N sing 81 n n C17 H171 78N sing 82 n n C17 H172 78N sing 83 n n C7 H71 78N sing 84 n n C7 H72 78N sing 85 n n C6 H61C 78N sing 86 n n C6 H62C 78N sing 87 n n C5 H51C 78N sing 88 n n C5 H52C 78N sing 89 n n C4 H41C 78N sing 90 n n C4 H42C 78N sing 91 n n C3 H31C 78N sing 92 n n C3 H32C 78N sing 93 n n C2 H2 78N sing 94 n n C1 H1 78N sing 95 n n C9 H91C 78N sing 96 n n C9 H92C 78N sing 97 n n C10 H101 78N sing 98 n n C10 H102 78N sing 99 n n C11 H111 78N sing 100 n n C11 H112 78N sing 101 n n C12 H121 78N sing 102 n n C12 H122 78N sing 103 n n C13 H131 78N sing 104 n n C13 H132 78N sing 105 n n C14 H141 78N sing 106 n n C14 H142 78N sing 107 n n C15 H151 78N sing 108 n n C15 H152 78N sing 109 n n C15 H153 78N sing 110 n n # _atom_sites.entry_id 6EIA _atom_sites.fract_transf_matrix[1][1] 0.009757 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009088 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 501 1 PO4 PO4 . C 2 PO4 A 1 502 2 PO4 PO4 . D 2 PO4 A 1 503 3 PO4 PO4 . E 2 PO4 A 1 504 4 PO4 PO4 . F 3 PG4 A 1 505 5 PG4 1PE . G 4 EPE A 1 506 6 EPE EPE . H 4 EPE A 1 507 7 EPE EPE . I 5 78N A 1 508 1 78N 78N . J 6 78M A 1 509 2 78M 78M . K 5 78N A 1 510 3 78N 78N . L 5 78N A 1 511 4 78N 78N . M 6 78M A 1 512 5 78M 78M . N 5 78N A 1 513 6 78N 78N . O 5 78N A 1 514 7 78N 78N . P 5 78N A 1 515 8 78N 78N . Q 5 78N A 1 516 9 78N 78N . R 5 78N A 1 517 10 78N 78N . S 5 78N A 1 518 11 78N 78N . T 5 78N A 1 519 12 78N 78N . U 6 78M A 1 520 13 78M 78M . V 6 78M A 1 521 14 78M 78M . W 5 78N A 1 522 15 78N 78N . X 6 78M A 1 523 16 78M 78M . Y 5 78N A 1 524 17 78N 78N . Z 5 78N A 1 525 18 78N 78N . AA 7 HOH A 1 601 79 HOH HOH . AA 7 HOH A 2 602 118 HOH HOH . AA 7 HOH A 3 603 116 HOH HOH . AA 7 HOH A 4 604 46 HOH HOH . AA 7 HOH A 5 605 28 HOH HOH . AA 7 HOH A 6 606 77 HOH HOH . AA 7 HOH A 7 607 117 HOH HOH . AA 7 HOH A 8 608 49 HOH HOH . AA 7 HOH A 9 609 18 HOH HOH . AA 7 HOH A 10 610 25 HOH HOH . AA 7 HOH A 11 611 30 HOH HOH . AA 7 HOH A 12 612 7 HOH HOH . AA 7 HOH A 13 613 68 HOH HOH . AA 7 HOH A 14 614 106 HOH HOH . AA 7 HOH A 15 615 33 HOH HOH . AA 7 HOH A 16 616 88 HOH HOH . AA 7 HOH A 17 617 6 HOH HOH . AA 7 HOH A 18 618 54 HOH HOH . AA 7 HOH A 19 619 100 HOH HOH . AA 7 HOH A 20 620 10 HOH HOH . AA 7 HOH A 21 621 20 HOH HOH . AA 7 HOH A 22 622 122 HOH HOH . AA 7 HOH A 23 623 21 HOH HOH . AA 7 HOH A 24 624 1 HOH HOH . AA 7 HOH A 25 625 4 HOH HOH . AA 7 HOH A 26 626 92 HOH HOH . AA 7 HOH A 27 627 95 HOH HOH . AA 7 HOH A 28 628 120 HOH HOH . AA 7 HOH A 29 629 11 HOH HOH . AA 7 HOH A 30 630 8 HOH HOH . AA 7 HOH A 31 631 9 HOH HOH . AA 7 HOH A 32 632 58 HOH HOH . AA 7 HOH A 33 633 24 HOH HOH . AA 7 HOH A 34 634 37 HOH HOH . AA 7 HOH A 35 635 13 HOH HOH . AA 7 HOH A 36 636 103 HOH HOH . AA 7 HOH A 37 637 31 HOH HOH . AA 7 HOH A 38 638 5 HOH HOH . AA 7 HOH A 39 639 82 HOH HOH . AA 7 HOH A 40 640 41 HOH HOH . AA 7 HOH A 41 641 71 HOH HOH . AA 7 HOH A 42 642 83 HOH HOH . AA 7 HOH A 43 643 38 HOH HOH . AA 7 HOH A 44 644 112 HOH HOH . AA 7 HOH A 45 645 62 HOH HOH . AA 7 HOH A 46 646 16 HOH HOH . AA 7 HOH A 47 647 45 HOH HOH . AA 7 HOH A 48 648 78 HOH HOH . AA 7 HOH A 49 649 23 HOH HOH . AA 7 HOH A 50 650 81 HOH HOH . AA 7 HOH A 51 651 56 HOH HOH . AA 7 HOH A 52 652 61 HOH HOH . AA 7 HOH A 53 653 29 HOH HOH . AA 7 HOH A 54 654 63 HOH HOH . AA 7 HOH A 55 655 96 HOH HOH . AA 7 HOH A 56 656 42 HOH HOH . AA 7 HOH A 57 657 121 HOH HOH . AA 7 HOH A 58 658 14 HOH HOH . AA 7 HOH A 59 659 104 HOH HOH . AA 7 HOH A 60 660 3 HOH HOH . AA 7 HOH A 61 661 89 HOH HOH . AA 7 HOH A 62 662 65 HOH HOH . AA 7 HOH A 63 663 75 HOH HOH . AA 7 HOH A 64 664 55 HOH HOH . AA 7 HOH A 65 665 26 HOH HOH . AA 7 HOH A 66 666 67 HOH HOH . AA 7 HOH A 67 667 57 HOH HOH . AA 7 HOH A 68 668 84 HOH HOH . AA 7 HOH A 69 669 64 HOH HOH . AA 7 HOH A 70 670 40 HOH HOH . AA 7 HOH A 71 671 69 HOH HOH . AA 7 HOH A 72 672 12 HOH HOH . AA 7 HOH A 73 673 52 HOH HOH . AA 7 HOH A 74 674 73 HOH HOH . AA 7 HOH A 75 675 105 HOH HOH . AA 7 HOH A 76 676 114 HOH HOH . AA 7 HOH A 77 677 59 HOH HOH . AA 7 HOH A 78 678 43 HOH HOH . AA 7 HOH A 79 679 36 HOH HOH . AA 7 HOH A 80 680 70 HOH HOH . AA 7 HOH A 81 681 39 HOH HOH . AA 7 HOH A 82 682 50 HOH HOH . AA 7 HOH A 83 683 32 HOH HOH . AA 7 HOH A 84 684 2 HOH HOH . AA 7 HOH A 85 685 80 HOH HOH . AA 7 HOH A 86 686 74 HOH HOH . AA 7 HOH A 87 687 85 HOH HOH . AA 7 HOH A 88 688 72 HOH HOH . AA 7 HOH A 89 689 48 HOH HOH . AA 7 HOH A 90 690 110 HOH HOH . AA 7 HOH A 91 691 115 HOH HOH . AA 7 HOH A 92 692 15 HOH HOH . AA 7 HOH A 93 693 119 HOH HOH . AA 7 HOH A 94 694 111 HOH HOH . AA 7 HOH A 95 695 35 HOH HOH . AA 7 HOH A 96 696 34 HOH HOH . AA 7 HOH A 97 697 107 HOH HOH . AA 7 HOH A 98 698 19 HOH HOH . AA 7 HOH A 99 699 22 HOH HOH . AA 7 HOH A 100 700 93 HOH HOH . AA 7 HOH A 101 701 44 HOH HOH . AA 7 HOH A 102 702 51 HOH HOH . AA 7 HOH A 103 703 53 HOH HOH . AA 7 HOH A 104 704 113 HOH HOH . AA 7 HOH A 105 705 17 HOH HOH . AA 7 HOH A 106 706 86 HOH HOH . AA 7 HOH A 107 707 97 HOH HOH . AA 7 HOH A 108 708 60 HOH HOH . AA 7 HOH A 109 709 47 HOH HOH . AA 7 HOH A 110 710 91 HOH HOH . AA 7 HOH A 111 711 94 HOH HOH . AA 7 HOH A 112 712 102 HOH HOH . AA 7 HOH A 113 713 98 HOH HOH . AA 7 HOH A 114 714 27 HOH HOH . AA 7 HOH A 115 715 108 HOH HOH . AA 7 HOH A 116 716 66 HOH HOH . AA 7 HOH A 117 717 87 HOH HOH . AA 7 HOH A 118 718 90 HOH HOH . AA 7 HOH A 119 719 76 HOH HOH . AA 7 HOH A 120 720 109 HOH HOH . AA 7 HOH A 121 721 99 HOH HOH . AA 7 HOH A 122 722 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O22 78N . . . Y 5 -49.88 -27.214 -27.186 1 70.22 ? O22 78N 524 A 1 HETATM 2 C C19 78N . . . Y 5 -50.133 -26.171 -26.215 1 72.27 ? C19 78N 524 A 1 HETATM 3 C C18 78N . . . Y 5 -49.033 -26.175 -25.135 1 70.35 ? C18 78N 524 A 1 HETATM 4 O O20 78N . . . Y 5 -48.007 -25.245 -25.493 1 66.96 ? O20 78N 524 A 1 HETATM 5 C C17 78N . . . Y 5 -49.65 -25.79 -23.8 1 72.72 ? C17 78N 524 A 1 HETATM 6 O O16 78N . . . Y 5 -48.635 -25.516 -22.857 1 77.84 ? O16 78N 524 A 1 HETATM 7 C C8 78N . . . Y 5 -49.094 -25.449 -21.518 1 81.76 ? C8 78N 524 A 1 HETATM 8 O O15 78N . . . Y 5 -49.392 -24.394 -21.039 1 85.45 ? O15 78N 524 A 1 HETATM 9 C C7 78N . . . Y 5 -49.2 -26.72 -20.687 1 78.72 ? C7 78N 524 A 1 HETATM 10 C C6 78N . . . Y 5 -49.239 -26.365 -19.188 1 76.39 ? C6 78N 524 A 1 HETATM 11 C C5 78N . . . Y 5 -48.104 -27.159 -18.436 1 78.86 ? C5 78N 524 A 1 HETATM 12 C C4 78N . . . Y 5 -48.594 -28.558 -18.06 1 78.99 ? C4 78N 524 A 1 HETATM 13 C C3 78N . . . Y 5 -47.394 -29.396 -17.564 1 79.7 ? C3 78N 524 A 1 HETATM 14 C C2 78N . . . Y 5 -47.741 -30.103 -16.265 1 78.99 ? C2 78N 524 A 1 HETATM 15 C C1 78N . . . Y 5 -47.429 -29.55 -15.06 1 78.35 ? C1 78N 524 A 1 HETATM 16 C C9 78N . . . Y 5 -46.705 -28.172 -14.968 1 85.47 ? C9 78N 524 A 1 HETATM 17 C C10 78N . . . Y 5 -45.385 -28.342 -14.216 1 87.26 ? C10 78N 524 A 1 HETATM 18 C C11 78N . . . Y 5 -45.106 -27.106 -13.352 1 89.94 ? C11 78N 524 A 1 HETATM 19 C C12 78N . . . Y 5 -45.129 -27.51 -11.848 1 116.49 ? C12 78N 524 A 1 HETATM 20 C C13 78N . . . Y 5 -44.453 -26.429 -11.004 1 115.3 ? C13 78N 524 A 1 HETATM 21 C C15 78N . . . Y 5 -44.14 -28.128 -9.169 1 114.8 ? C15 78N 524 A 1 HETATM 22 C C14 78N . . . Y 5 -44.676 -26.73 -9.505 1 115.1 ? C14 78N 524 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 22 #