data_6EID
#
_model_server_result.job_id            6gxcXXFOPM1p0Xf8nPfzlA 
_model_server_result.datetime_utc      '2024-12-23 03:45:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6eid 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1101}' 
#
_entry.id    6EID 
#
_exptl.entry_id    6EID 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    13 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.95 
_cell.angle_gamma         90 
_cell.entry_id            6EID 
_cell.length_a            62.78 
_cell.length_b            135.77 
_cell.length_c            78.12 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6EID 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,U 1 1,2 
B,N,O,P,Q,R,S,T,V 2 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_657 -x+1,y,-z+2 -1 0 0 0 1 0 0 0 -1 54.739192 0 156.032955 
3 'crystal symmetry operation' 2_658 -x+1,y,-z+3 -1 0 0 0 1 0 0 0 -1 50.718787 0 234.049432 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 34 A CYS 34 1_555 A SG CYS 36 A CYS 36 2_657 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 B SG CYS 34 B CYS 34 1_555 B SG CYS 36 B CYS 36 2_658 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
covale ? covale1 A C SER 256 A SER 256 1_555 A N LYR 257 A LYR 257 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.332 ? 
covale ? covale2 A C SER 256 A SER 256 1_555 A N LYR 257 A LYR 257 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.334 ? 
covale ? covale3 A C LYR 257 A LYR 257 1_555 A N ASN 258 A ASN 258 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale4 A C LYR 257 A LYR 257 1_555 A N ASN 258 A ASN 258 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale5 B C SER 256 B SER 256 1_555 B N LYR 257 B LYR 257 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 B C SER 256 B SER 256 1_555 B N LYR 257 B LYR 257 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.333 ? 
covale ? covale7 B C LYR 257 B LYR 257 1_555 B N ASN 258 B ASN 258 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale8 B C LYR 257 B LYR 257 1_555 B N ASN 258 B ASN 258 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.336 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 344 n n 
C10 C9 OLC doub 345 n n 
C10 C11 OLC sing 346 n n 
C9 C8 OLC sing 347 n n 
C17 C16 OLC sing 348 z n 
C11 C12 OLC sing 349 n n 
C8 C7 OLC sing 350 n n 
C24 C22 OLC sing 351 n n 
C24 O25 OLC sing 352 n n 
C16 C15 OLC sing 353 n n 
C12 C13 OLC sing 354 n n 
C7 C6 OLC sing 355 n n 
C15 C14 OLC sing 356 n n 
C13 C14 OLC sing 357 n n 
C6 C5 OLC sing 358 n n 
C5 C4 OLC sing 359 n n 
C4 C3 OLC sing 360 n n 
C3 C2 OLC sing 361 n n 
C2 C1 OLC sing 362 n n 
C21 C22 OLC sing 363 n n 
C21 O20 OLC sing 364 n n 
C1 O19 OLC doub 365 n n 
C1 O20 OLC sing 366 n n 
C22 O23 OLC sing 367 n n 
C18 H18 OLC sing 368 n n 
C18 H18A OLC sing 369 n n 
C18 H18B OLC sing 370 n n 
C10 H10 OLC sing 371 n n 
C9 H9 OLC sing 372 n n 
C17 H17 OLC sing 373 n n 
C17 H17A OLC sing 374 n n 
C11 H11 OLC sing 375 n n 
C11 H11A OLC sing 376 n n 
C8 H8 OLC sing 377 n n 
C8 H8A OLC sing 378 n n 
C24 H24 OLC sing 379 n n 
C24 H24A OLC sing 380 n n 
C16 H16 OLC sing 381 n n 
C16 H16A OLC sing 382 n n 
C12 H12 OLC sing 383 n n 
C12 H12A OLC sing 384 n n 
C7 H7 OLC sing 385 n n 
C7 H7A OLC sing 386 n n 
C15 H15 OLC sing 387 n n 
C15 H15A OLC sing 388 n n 
C13 H13 OLC sing 389 n n 
C13 H13A OLC sing 390 n n 
C6 H6 OLC sing 391 n n 
C6 H6A OLC sing 392 n n 
C14 H14 OLC sing 393 n n 
C14 H14A OLC sing 394 n n 
C5 H5 OLC sing 395 n n 
C5 H5A OLC sing 396 n n 
C4 H4 OLC sing 397 n n 
C4 H4A OLC sing 398 n n 
C3 H3 OLC sing 399 n n 
C3 H3A OLC sing 400 n n 
C2 H2 OLC sing 401 n n 
C2 H2A OLC sing 402 n n 
C21 H21 OLC sing 403 n n 
C21 H21A OLC sing 404 n n 
C22 H22 OLC sing 405 n n 
O25 HO25 OLC sing 406 n n 
O23 HO23 OLC sing 407 n n 
#
_atom_sites.entry_id                     6EID 
_atom_sites.fract_transf_matrix[1][1]    0.015929 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00082 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007365 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012818 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OLC A 1 1101 1101 OLC OLC . 
D 2 OLC A 1 1102 1102 OLC OLC . 
E 2 OLC A 1 1103 1104 OLC OLC . 
F 2 OLC A 1 1104 1103 OLC OLC . 
G 2 OLC A 1 1105 1105 OLC OLC . 
H 2 OLC A 1 1106 1106 OLC OLC . 
I 2 OLC A 1 1107 1107 OLC OLC . 
J 2 OLC A 1 1108 1108 OLC OLC . 
K 3 PO4 A 1 1109 1109 PO4 PO4 . 
L 3 PO4 A 1 1110 1110 PO4 PO4 . 
M 4 EDT A 1 1111 1111 EDT EDT . 
N 2 OLC B 1 1101 1101 OLC OLC . 
O 2 OLC B 1 1102 1102 OLC OLC . 
P 2 OLC B 1 1103 1103 OLC OLC . 
Q 2 OLC B 1 1104 1104 OLC OLC . 
R 2 OLC B 1 1105 1105 OLC OLC . 
S 3 PO4 B 1 1106 1109 PO4 PO4 . 
T 3 PO4 B 1 1107 1110 PO4 PO4 . 
U 5 HOH A 1 1201 1025 HOH HOH . 
U 5 HOH A 2 1202 1017 HOH HOH . 
U 5 HOH A 3 1203 1008 HOH HOH . 
U 5 HOH A 4 1204 1004 HOH HOH . 
U 5 HOH A 5 1205 1022 HOH HOH . 
U 5 HOH A 6 1206 1009 HOH HOH . 
U 5 HOH A 7 1207 1001 HOH HOH . 
U 5 HOH A 8 1208 1005 HOH HOH . 
U 5 HOH A 9 1209 1016 HOH HOH . 
U 5 HOH A 10 1210 1018 HOH HOH . 
U 5 HOH A 11 1211 1006 HOH HOH . 
U 5 HOH A 12 1212 1023 HOH HOH . 
U 5 HOH A 13 1213 1013 HOH HOH . 
U 5 HOH A 14 1214 1014 HOH HOH . 
U 5 HOH A 15 1215 1002 HOH HOH . 
U 5 HOH A 16 1216 1026 HOH HOH . 
U 5 HOH A 17 1217 1021 HOH HOH . 
U 5 HOH A 18 1218 1020 HOH HOH . 
U 5 HOH A 19 1219 1007 HOH HOH . 
U 5 HOH A 20 1220 1010 HOH HOH . 
U 5 HOH A 21 1221 1012 HOH HOH . 
U 5 HOH A 22 1222 1019 HOH HOH . 
U 5 HOH A 23 1223 1015 HOH HOH . 
U 5 HOH A 24 1224 1024 HOH HOH . 
U 5 HOH A 25 1225 1011 HOH HOH . 
U 5 HOH A 26 1226 1003 HOH HOH . 
V 5 HOH B 1 1201 1017 HOH HOH . 
V 5 HOH B 2 1202 1008 HOH HOH . 
V 5 HOH B 3 1203 1026 HOH HOH . 
V 5 HOH B 4 1204 1001 HOH HOH . 
V 5 HOH B 5 1205 1025 HOH HOH . 
V 5 HOH B 6 1206 1005 HOH HOH . 
V 5 HOH B 7 1207 1003 HOH HOH . 
V 5 HOH B 8 1208 1009 HOH HOH . 
V 5 HOH B 9 1209 1022 HOH HOH . 
V 5 HOH B 10 1210 1016 HOH HOH . 
V 5 HOH B 11 1211 1006 HOH HOH . 
V 5 HOH B 12 1212 1014 HOH HOH . 
V 5 HOH B 13 1213 1027 HOH HOH . 
V 5 HOH B 14 1214 1011 HOH HOH . 
V 5 HOH B 15 1215 1002 HOH HOH . 
V 5 HOH B 16 1216 1013 HOH HOH . 
V 5 HOH B 17 1217 1018 HOH HOH . 
V 5 HOH B 18 1218 1019 HOH HOH . 
V 5 HOH B 19 1219 1023 HOH HOH . 
V 5 HOH B 20 1220 1007 HOH HOH . 
V 5 HOH B 21 1221 1010 HOH HOH . 
V 5 HOH B 22 1222 1015 HOH HOH . 
V 5 HOH B 23 1223 1012 HOH HOH . 
V 5 HOH B 24 1224 1024 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C9 OLC . . . C 2 21.085 -9.523 97.596 1 57.21 ? C9 OLC 1101 A 1 
HETATM 2 C C8 OLC . . . C 2 21.077 -10.017 96.165 1 58.91 ? C8 OLC 1101 A 1 
HETATM 3 C C24 OLC . . . C 2 19.339 -22.471 94.26 1 97.1 ? C24 OLC 1101 A 1 
HETATM 4 C C7 OLC . . . C 2 22.223 -10.975 95.824 1 55.67 ? C7 OLC 1101 A 1 
HETATM 5 C C6 OLC . . . C 2 21.938 -11.797 94.544 1 55.52 ? C6 OLC 1101 A 1 
HETATM 6 C C5 OLC . . . C 2 22.311 -13.298 94.647 1 56.91 ? C5 OLC 1101 A 1 
HETATM 7 C C4 OLC . . . C 2 21.133 -14.287 94.695 1 53.08 ? C4 OLC 1101 A 1 
HETATM 8 C C3 OLC . . . C 2 21.559 -15.747 94.504 1 57.24 ? C3 OLC 1101 A 1 
HETATM 9 C C2 OLC . . . C 2 20.715 -16.719 95.337 1 65.5 ? C2 OLC 1101 A 1 
HETATM 10 C C21 OLC . . . C 2 19.423 -20.24 95.463 1 94.05 ? C21 OLC 1101 A 1 
HETATM 11 C C1 OLC . . . C 2 20.931 -18.212 95.072 1 74.92 ? C1 OLC 1101 A 1 
HETATM 12 C C22 OLC . . . C 2 20.057 -21.64 95.338 1 98.07 ? C22 OLC 1101 A 1 
HETATM 13 O O19 OLC . . . C 2 21.6 -18.606 94.134 1 76.32 ? O19 OLC 1101 A 1 
HETATM 14 O O25 OLC . . . C 2 19.501 -21.905 92.95 1 92.13 ? O25 OLC 1101 A 1 
HETATM 15 O O23 OLC . . . C 2 21.469 -21.586 95.05 1 94.18 ? O23 OLC 1101 A 1 
HETATM 16 O O20 OLC . . . C 2 20.34 -19.239 95.95 1 90.35 ? O20 OLC 1101 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           16 
#