data_6EIG # _model_server_result.job_id vM8iORjuIhou3jsih3nBQA _model_server_result.datetime_utc '2024-10-19 11:37:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eig # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1106}' # _entry.id 6EIG # _exptl.entry_id 6EIG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.22 _cell.angle_gamma 90 _cell.entry_id 6EIG _cell.length_a 64.51 _cell.length_b 134.06 _cell.length_c 78.47 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EIG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,N 1 1,2 B,J,K,L,M,O 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -0.301302 0 78.469422 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 34 A CYS 34 1_555 A SG CYS 36 A CYS 36 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? disulf ? disulf2 B SG CYS 34 B CYS 34 1_555 B SG CYS 36 B CYS 36 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.94 ? covale ? covale1 A C SER 256 A SER 256 1_555 A N LYR 257 A LYR 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C LYR 257 A LYR 257 1_555 A N ASN 258 A ASN 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 E C9 OLC . A OLC 1103 1_555 H C12 LFA . A LFA 1106 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale4 E C7 OLC . A OLC 1103 1_555 H C11 LFA . A LFA 1106 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.522 ? covale ? covale5 E C5 OLC . A OLC 1103 1_555 H C8 LFA . A LFA 1106 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.531 ? covale ? covale6 B C SER 256 B SER 256 1_555 B N LYR 257 B LYR 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 B C LYR 257 B LYR 257 1_555 B N ASN 258 B ASN 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 194 n n C1 H11 LFA sing 195 n n C1 H12 LFA sing 196 n n C1 H13 LFA sing 197 n n C2 C3 LFA sing 198 n n C2 H21 LFA sing 199 n n C2 H22 LFA sing 200 n n C3 C4 LFA sing 201 n n C3 H31 LFA sing 202 n n C3 H32 LFA sing 203 n n C4 C5 LFA sing 204 n n C4 H41 LFA sing 205 n n C4 H42 LFA sing 206 n n C5 C6 LFA sing 207 n n C5 H51 LFA sing 208 n n C5 H52 LFA sing 209 n n C6 C7 LFA sing 210 n n C6 H61 LFA sing 211 n n C6 H62 LFA sing 212 n n C7 C8 LFA sing 213 n n C7 H71 LFA sing 214 n n C7 H72 LFA sing 215 n n C8 C9 LFA sing 216 n n C8 H81 LFA sing 217 n n C8 H82 LFA sing 218 n n C9 C10 LFA sing 219 n n C9 H91 LFA sing 220 n n C9 H92 LFA sing 221 n n C10 C11 LFA sing 222 n n C10 H101 LFA sing 223 n n C10 H102 LFA sing 224 n n C11 C12 LFA sing 225 n n C11 H111 LFA sing 226 n n C11 H112 LFA sing 227 n n C12 C13 LFA sing 228 n n C12 H121 LFA sing 229 n n C12 H122 LFA sing 230 n n C13 C14 LFA sing 231 n n C13 H131 LFA sing 232 n n C13 H132 LFA sing 233 n n C14 C15 LFA sing 234 n n C14 H141 LFA sing 235 n n C14 H142 LFA sing 236 n n C15 C16 LFA sing 237 n n C15 H151 LFA sing 238 n n C15 H152 LFA sing 239 n n C16 C17 LFA sing 240 n n C16 H161 LFA sing 241 n n C16 H162 LFA sing 242 n n C17 C18 LFA sing 243 n n C17 H171 LFA sing 244 n n C17 H172 LFA sing 245 n n C18 C19 LFA sing 246 n n C18 H181 LFA sing 247 n n C18 H182 LFA sing 248 n n C19 C20 LFA sing 249 n n C19 H191 LFA sing 250 n n C19 H192 LFA sing 251 n n C20 H201 LFA sing 252 n n C20 H202 LFA sing 253 n n C20 H203 LFA sing 254 n n # _atom_sites.entry_id 6EIG _atom_sites.fract_transf_matrix[1][1] 0.015501 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000061 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012744 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 OLC A 1 1101 1101 OLC OLC . D 2 OLC A 1 1102 1102 OLC OLC . E 2 OLC A 1 1103 1103 OLC OLC . F 2 OLC A 1 1104 1105 OLC OLC . G 3 PO4 A 1 1105 1 PO4 PO4 . H 4 LFA A 1 1106 1 LFA LFA . I 4 LFA A 1 1107 2 LFA LFA . J 2 OLC B 1 1101 1101 OLC OLC . K 2 OLC B 1 1102 1102 OLC OLC . L 2 OLC B 1 1103 1103 OLC OLC . M 3 PO4 B 1 1104 2 PO4 PO4 . N 5 HOH A 1 1201 1009 HOH HOH . N 5 HOH A 2 1202 1008 HOH HOH . N 5 HOH A 3 1203 1016 HOH HOH . N 5 HOH A 4 1204 1019 HOH HOH . N 5 HOH A 5 1205 1007 HOH HOH . N 5 HOH A 6 1206 1002 HOH HOH . N 5 HOH A 7 1207 1026 HOH HOH . N 5 HOH A 8 1208 1023 HOH HOH . N 5 HOH A 9 1209 1006 HOH HOH . N 5 HOH A 10 1210 1022 HOH HOH . N 5 HOH A 11 1211 1014 HOH HOH . N 5 HOH A 12 1212 1010 HOH HOH . N 5 HOH A 13 1213 1020 HOH HOH . N 5 HOH A 14 1214 1003 HOH HOH . N 5 HOH A 15 1215 1001 HOH HOH . N 5 HOH A 16 1216 1004 HOH HOH . N 5 HOH A 17 1217 1005 HOH HOH . O 5 HOH B 1 1201 1009 HOH HOH . O 5 HOH B 2 1202 1031 HOH HOH . O 5 HOH B 3 1203 1007 HOH HOH . O 5 HOH B 4 1204 1008 HOH HOH . O 5 HOH B 5 1205 1016 HOH HOH . O 5 HOH B 6 1206 1014 HOH HOH . O 5 HOH B 7 1207 1022 HOH HOH . O 5 HOH B 8 1208 1006 HOH HOH . O 5 HOH B 9 1209 1002 HOH HOH . O 5 HOH B 10 1210 1030 HOH HOH . O 5 HOH B 11 1211 1010 HOH HOH . O 5 HOH B 12 1212 1024 HOH HOH . O 5 HOH B 13 1213 1003 HOH HOH . O 5 HOH B 14 1214 1025 HOH HOH . O 5 HOH B 15 1215 1005 HOH HOH . O 5 HOH B 16 1216 1027 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . H 4 -10.917 16.268 11.859 1 166.56 ? C1 LFA 1106 A 1 HETATM 2 C C2 LFA . . . H 4 -9.97 15.805 10.774 1 188.07 ? C2 LFA 1106 A 1 HETATM 3 C C3 LFA . . . H 4 -10.556 14.627 10.005 1 214.05 ? C3 LFA 1106 A 1 HETATM 4 C C4 LFA . . . H 4 -9.501 13.953 9.134 1 222.81 ? C4 LFA 1106 A 1 HETATM 5 C C5 LFA . . . H 4 -10.061 12.7 8.469 1 209.91 ? C5 LFA 1106 A 1 HETATM 6 C C6 LFA . . . H 4 -9.156 11.495 8.7 1 209.25 ? C6 LFA 1106 A 1 HETATM 7 C C7 LFA . . . H 4 -9.31 10.471 7.581 1 221.67 ? C7 LFA 1106 A 1 HETATM 8 C C8 LFA . . . H 4 -7.957 10.124 6.965 1 249.88 ? C8 LFA 1106 A 1 HETATM 9 C C9 LFA . . . H 4 -8.111 9.096 5.849 1 270.26 ? C9 LFA 1106 A 1 HETATM 10 C C10 LFA . . . H 4 -7.073 7.985 5.967 1 263.78 ? C10 LFA 1106 A 1 HETATM 11 C C11 LFA . . . H 4 -7.622 6.667 5.427 1 252.56 ? C11 LFA 1106 A 1 HETATM 12 C C12 LFA . . . H 4 -8.323 5.864 6.524 1 246.65 ? C12 LFA 1106 A 1 HETATM 13 C C13 LFA . . . H 4 -9.429 4.991 5.939 1 238.12 ? C13 LFA 1106 A 1 HETATM 14 C C14 LFA . . . H 4 -10.6 4.871 6.908 1 233.75 ? C14 LFA 1106 A 1 HETATM 15 C C15 LFA . . . H 4 -10.22 4.042 8.131 1 224.66 ? C15 LFA 1106 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #