data_6EIK # _model_server_result.job_id jjCryn05n68NPNBPO23Nkw _model_server_result.datetime_utc '2024-12-01 10:49:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eik # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":101}' # _entry.id 6EIK # _exptl.entry_id 6EIK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EIK _cell.length_a 62.21 _cell.length_b 62.21 _cell.length_c 108.68 _cell.Z_PDB 56 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EIK _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N GLY 2 A GLY 1 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.434 ? covale ? covale2 B C ACE 1 B ACE 0 1_555 B N GLY 2 B GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 C C ACE 1 C ACE 0 1_555 C N GLY 2 C GLY 1 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.424 ? covale ? covale4 D C ACE 1 D ACE 0 1_555 D N GLY 2 D GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 ? covale ? covale5 E C ACE 1 E ACE 0 1_555 E N GLY 2 E GLY 1 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.381 ? covale ? covale6 F C ACE 1 F ACE 0 1_555 F N GLY 2 F GLY 1 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.331 ? covale ? covale7 F C ACE 1 F ACE 0 1_555 F N GLY 2 F GLY 1 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.422 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 45 n n C O2 FMT sing 46 n n C H FMT sing 47 n n O2 HO2 FMT sing 48 n n # _atom_sites.entry_id 6EIK _atom_sites.fract_transf_matrix[1][1] 0.016075 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016075 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009201 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 2 GOL A 1 101 1 GOL GOL . I 2 GOL B 1 101 3 GOL GOL . J 3 FMT C 1 101 4 FMT FMT . K 2 GOL C 1 102 5 GOL GOL . L 2 GOL D 1 101 2 GOL GOL . M 4 HOH A 1 201 116 HOH HOH . M 4 HOH A 2 202 134 HOH HOH . M 4 HOH A 3 203 118 HOH HOH . M 4 HOH A 4 204 26 HOH HOH . M 4 HOH A 5 205 8 HOH HOH . M 4 HOH A 6 206 82 HOH HOH . M 4 HOH A 7 207 87 HOH HOH . M 4 HOH A 8 208 79 HOH HOH . M 4 HOH A 9 209 16 HOH HOH . M 4 HOH A 10 210 94 HOH HOH . M 4 HOH A 11 211 88 HOH HOH . M 4 HOH A 12 212 63 HOH HOH . M 4 HOH A 13 213 24 HOH HOH . M 4 HOH A 14 214 78 HOH HOH . M 4 HOH A 15 215 29 HOH HOH . M 4 HOH A 16 216 75 HOH HOH . N 4 HOH B 1 201 32 HOH HOH . N 4 HOH B 2 202 30 HOH HOH . N 4 HOH B 3 203 48 HOH HOH . N 4 HOH B 4 204 28 HOH HOH . N 4 HOH B 5 205 93 HOH HOH . N 4 HOH B 6 206 49 HOH HOH . N 4 HOH B 7 207 43 HOH HOH . N 4 HOH B 8 208 44 HOH HOH . N 4 HOH B 9 209 62 HOH HOH . N 4 HOH B 10 210 100 HOH HOH . N 4 HOH B 11 211 20 HOH HOH . N 4 HOH B 12 212 51 HOH HOH . N 4 HOH B 13 213 33 HOH HOH . N 4 HOH B 14 214 12 HOH HOH . N 4 HOH B 15 215 81 HOH HOH . N 4 HOH B 16 216 46 HOH HOH . N 4 HOH B 17 217 122 HOH HOH . N 4 HOH B 18 218 2 HOH HOH . N 4 HOH B 19 219 109 HOH HOH . N 4 HOH B 20 220 84 HOH HOH . N 4 HOH B 21 221 133 HOH HOH . N 4 HOH B 22 222 67 HOH HOH . N 4 HOH B 23 223 115 HOH HOH . N 4 HOH B 24 224 47 HOH HOH . N 4 HOH B 25 225 136 HOH HOH . O 4 HOH C 1 201 131 HOH HOH . O 4 HOH C 2 202 31 HOH HOH . O 4 HOH C 3 203 83 HOH HOH . O 4 HOH C 4 204 25 HOH HOH . O 4 HOH C 5 205 22 HOH HOH . O 4 HOH C 6 206 10 HOH HOH . O 4 HOH C 7 207 21 HOH HOH . O 4 HOH C 8 208 41 HOH HOH . O 4 HOH C 9 209 53 HOH HOH . O 4 HOH C 10 210 96 HOH HOH . O 4 HOH C 11 211 18 HOH HOH . O 4 HOH C 12 212 117 HOH HOH . O 4 HOH C 13 213 101 HOH HOH . O 4 HOH C 14 214 104 HOH HOH . O 4 HOH C 15 215 77 HOH HOH . P 4 HOH D 1 201 135 HOH HOH . P 4 HOH D 2 202 91 HOH HOH . P 4 HOH D 3 203 71 HOH HOH . P 4 HOH D 4 204 42 HOH HOH . P 4 HOH D 5 205 97 HOH HOH . P 4 HOH D 6 206 35 HOH HOH . P 4 HOH D 7 207 76 HOH HOH . P 4 HOH D 8 208 86 HOH HOH . P 4 HOH D 9 209 102 HOH HOH . P 4 HOH D 10 210 50 HOH HOH . P 4 HOH D 11 211 6 HOH HOH . P 4 HOH D 12 212 80 HOH HOH . P 4 HOH D 13 213 98 HOH HOH . P 4 HOH D 14 214 19 HOH HOH . P 4 HOH D 15 215 127 HOH HOH . P 4 HOH D 16 216 121 HOH HOH . P 4 HOH D 17 217 68 HOH HOH . P 4 HOH D 18 218 130 HOH HOH . Q 4 HOH E 1 101 58 HOH HOH . Q 4 HOH E 2 102 85 HOH HOH . Q 4 HOH E 3 103 9 HOH HOH . Q 4 HOH E 4 104 123 HOH HOH . Q 4 HOH E 5 105 54 HOH HOH . Q 4 HOH E 6 106 66 HOH HOH . Q 4 HOH E 7 107 60 HOH HOH . Q 4 HOH E 8 108 90 HOH HOH . Q 4 HOH E 9 109 11 HOH HOH . Q 4 HOH E 10 110 5 HOH HOH . Q 4 HOH E 11 111 110 HOH HOH . Q 4 HOH E 12 112 113 HOH HOH . Q 4 HOH E 13 113 107 HOH HOH . Q 4 HOH E 14 114 106 HOH HOH . Q 4 HOH E 15 115 112 HOH HOH . Q 4 HOH E 16 116 39 HOH HOH . Q 4 HOH E 17 117 119 HOH HOH . R 4 HOH F 1 101 73 HOH HOH . R 4 HOH F 2 102 23 HOH HOH . R 4 HOH F 3 103 69 HOH HOH . R 4 HOH F 4 104 36 HOH HOH . R 4 HOH F 5 105 72 HOH HOH . R 4 HOH F 6 106 45 HOH HOH . R 4 HOH F 7 107 37 HOH HOH . R 4 HOH F 8 108 89 HOH HOH . R 4 HOH F 9 109 4 HOH HOH . R 4 HOH F 10 110 14 HOH HOH . R 4 HOH F 11 111 70 HOH HOH . R 4 HOH F 12 112 129 HOH HOH . R 4 HOH F 13 113 1 HOH HOH . R 4 HOH F 14 114 65 HOH HOH . R 4 HOH F 15 115 3 HOH HOH . R 4 HOH F 16 116 59 HOH HOH . R 4 HOH F 17 117 95 HOH HOH . R 4 HOH F 18 118 126 HOH HOH . R 4 HOH F 19 119 132 HOH HOH . R 4 HOH F 20 120 56 HOH HOH . R 4 HOH F 21 121 120 HOH HOH . S 4 HOH G 1 101 99 HOH HOH . S 4 HOH G 2 102 17 HOH HOH . S 4 HOH G 3 103 103 HOH HOH . S 4 HOH G 4 104 61 HOH HOH . S 4 HOH G 5 105 108 HOH HOH . S 4 HOH G 6 106 55 HOH HOH . S 4 HOH G 7 107 111 HOH HOH . S 4 HOH G 8 108 34 HOH HOH . S 4 HOH G 9 109 15 HOH HOH . S 4 HOH G 10 110 27 HOH HOH . S 4 HOH G 11 111 38 HOH HOH . S 4 HOH G 12 112 7 HOH HOH . S 4 HOH G 13 113 57 HOH HOH . S 4 HOH G 14 114 128 HOH HOH . S 4 HOH G 15 115 92 HOH HOH . S 4 HOH G 16 116 13 HOH HOH . S 4 HOH G 17 117 40 HOH HOH . S 4 HOH G 18 118 74 HOH HOH . S 4 HOH G 19 119 125 HOH HOH . S 4 HOH G 20 120 114 HOH HOH . S 4 HOH G 21 121 105 HOH HOH . S 4 HOH G 22 122 52 HOH HOH . S 4 HOH G 23 123 124 HOH HOH . S 4 HOH G 24 124 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . A . J 3 62.505 -0.095 10.172 0.25 45.32 ? C FMT 101 C 1 HETATM 2 C C FMT . B . J 3 62.384 0.156 9.693 0.25 51.83 ? C FMT 101 C 1 HETATM 3 O O1 FMT . A . J 3 63.365 -0.72 10.784 0.25 33.49 ? O1 FMT 101 C 1 HETATM 4 O O1 FMT . B . J 3 62.086 -0.893 10.278 0.25 47.09 ? O1 FMT 101 C 1 HETATM 5 O O2 FMT . A . J 3 62.693 0.047 8.808 0.25 63.99 ? O2 FMT 101 C 1 HETATM 6 O O2 FMT . B . J 3 62.442 0.138 8.305 0.25 57.53 ? O2 FMT 101 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #