data_6EIN # _model_server_result.job_id IdyTGADhftC9qOYQq5iD9Q _model_server_result.datetime_utc '2024-12-22 11:06:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ein # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":805}' # _entry.id 6EIN # _exptl.entry_id 6EIN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6EIN _cell.length_a 143.47 _cell.length_b 143.47 _cell.length_c 153.47 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EIN _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 415 A CYS 706 1_555 A SG CYS 432 A CYS 723 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? disulf ? disulf2 A SG CYS 417 A CYS 708 1_555 A SG CYS 434 A CYS 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? covale ? covale1 A SG CYS 189 A CYS 480 1_555 B C15 B7Z . A B7Z 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? metalc ? metalc1 A NE2 HIS 208 A HIS 499 1_555 D MN MN . A MN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc2 A OE2 GLU 210 A GLU 501 1_555 D MN MN . A MN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc3 A NE2 HIS 296 A HIS 587 1_555 D MN MN . A MN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc4 A SG CYS 401 A CYS 692 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc5 A SG CYS 404 A CYS 695 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc6 A SG CYS 424 A CYS 715 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc7 A ND1 HIS 427 A HIS 718 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc8 B N2 B7Z . A B7Z 801 1_555 D MN MN . A MN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc9 B N7 B7Z . A B7Z 801 1_555 D MN MN . A MN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc10 D MN MN . A MN 803 1_555 J O HOH . A HOH 975 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc11 E MN MN . A MN 804 1_555 J O HOH . A HOH 1074 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 137 n n C1 C2 EDO sing 138 n n C1 H11 EDO sing 139 n n C1 H12 EDO sing 140 n n O1 HO1 EDO sing 141 n n C2 O2 EDO sing 142 n n C2 H21 EDO sing 143 n n C2 H22 EDO sing 144 n n O2 HO2 EDO sing 145 n n # _atom_sites.entry_id 6EIN _atom_sites.fract_transf_matrix[1][1] 0.00697 _atom_sites.fract_transf_matrix[1][2] 0.004024 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008048 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006516 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B7Z A 1 801 801 B7Z B7Z . C 3 ZN A 1 802 802 ZN ZN . D 4 MN A 1 803 803 MN MN . E 4 MN A 1 804 804 MN MN . F 5 EDO A 1 805 805 EDO EDO . G 5 EDO A 1 806 806 EDO EDO . H 5 EDO A 1 807 807 EDO EDO . I 5 EDO A 1 808 808 EDO EDO . J 6 HOH A 1 901 901 HOH HOH . J 6 HOH A 2 902 902 HOH HOH . J 6 HOH A 3 903 903 HOH HOH . J 6 HOH A 4 904 904 HOH HOH . J 6 HOH A 5 905 905 HOH HOH . J 6 HOH A 6 906 906 HOH HOH . J 6 HOH A 7 907 907 HOH HOH . J 6 HOH A 8 908 908 HOH HOH . J 6 HOH A 9 909 909 HOH HOH . J 6 HOH A 10 910 910 HOH HOH . J 6 HOH A 11 911 911 HOH HOH . J 6 HOH A 12 912 912 HOH HOH . J 6 HOH A 13 913 913 HOH HOH . J 6 HOH A 14 914 914 HOH HOH . J 6 HOH A 15 915 915 HOH HOH . J 6 HOH A 16 916 916 HOH HOH . J 6 HOH A 17 917 917 HOH HOH . J 6 HOH A 18 918 918 HOH HOH . J 6 HOH A 19 919 919 HOH HOH . J 6 HOH A 20 920 920 HOH HOH . J 6 HOH A 21 921 921 HOH HOH . J 6 HOH A 22 922 922 HOH HOH . J 6 HOH A 23 923 923 HOH HOH . J 6 HOH A 24 924 924 HOH HOH . J 6 HOH A 25 925 925 HOH HOH . J 6 HOH A 26 926 926 HOH HOH . J 6 HOH A 27 927 927 HOH HOH . J 6 HOH A 28 928 928 HOH HOH . J 6 HOH A 29 929 929 HOH HOH . J 6 HOH A 30 930 930 HOH HOH . J 6 HOH A 31 931 931 HOH HOH . J 6 HOH A 32 932 932 HOH HOH . J 6 HOH A 33 933 933 HOH HOH . J 6 HOH A 34 934 934 HOH HOH . J 6 HOH A 35 935 935 HOH HOH . J 6 HOH A 36 936 936 HOH HOH . J 6 HOH A 37 937 937 HOH HOH . J 6 HOH A 38 938 938 HOH HOH . J 6 HOH A 39 939 939 HOH HOH . J 6 HOH A 40 940 940 HOH HOH . J 6 HOH A 41 941 941 HOH HOH . J 6 HOH A 42 942 942 HOH HOH . J 6 HOH A 43 943 943 HOH HOH . J 6 HOH A 44 944 944 HOH HOH . J 6 HOH A 45 945 945 HOH HOH . J 6 HOH A 46 946 946 HOH HOH . J 6 HOH A 47 947 947 HOH HOH . J 6 HOH A 48 948 948 HOH HOH . J 6 HOH A 49 949 949 HOH HOH . J 6 HOH A 50 950 950 HOH HOH . J 6 HOH A 51 951 951 HOH HOH . J 6 HOH A 52 952 952 HOH HOH . J 6 HOH A 53 953 953 HOH HOH . J 6 HOH A 54 954 954 HOH HOH . J 6 HOH A 55 955 955 HOH HOH . J 6 HOH A 56 956 956 HOH HOH . J 6 HOH A 57 957 957 HOH HOH . J 6 HOH A 58 958 958 HOH HOH . J 6 HOH A 59 959 959 HOH HOH . J 6 HOH A 60 960 960 HOH HOH . J 6 HOH A 61 961 961 HOH HOH . J 6 HOH A 62 962 962 HOH HOH . J 6 HOH A 63 963 963 HOH HOH . J 6 HOH A 64 964 964 HOH HOH . J 6 HOH A 65 965 965 HOH HOH . J 6 HOH A 66 966 966 HOH HOH . J 6 HOH A 67 967 967 HOH HOH . J 6 HOH A 68 968 968 HOH HOH . J 6 HOH A 69 969 969 HOH HOH . J 6 HOH A 70 970 970 HOH HOH . J 6 HOH A 71 971 971 HOH HOH . J 6 HOH A 72 972 972 HOH HOH . J 6 HOH A 73 973 973 HOH HOH . J 6 HOH A 74 974 974 HOH HOH . J 6 HOH A 75 975 975 HOH HOH . J 6 HOH A 76 976 976 HOH HOH . J 6 HOH A 77 977 977 HOH HOH . J 6 HOH A 78 978 978 HOH HOH . J 6 HOH A 79 979 979 HOH HOH . J 6 HOH A 80 980 980 HOH HOH . J 6 HOH A 81 981 981 HOH HOH . J 6 HOH A 82 982 982 HOH HOH . J 6 HOH A 83 983 983 HOH HOH . J 6 HOH A 84 984 984 HOH HOH . J 6 HOH A 85 985 985 HOH HOH . J 6 HOH A 86 986 986 HOH HOH . J 6 HOH A 87 987 987 HOH HOH . J 6 HOH A 88 988 988 HOH HOH . J 6 HOH A 89 989 989 HOH HOH . J 6 HOH A 90 990 990 HOH HOH . J 6 HOH A 91 991 991 HOH HOH . J 6 HOH A 92 992 992 HOH HOH . J 6 HOH A 93 993 993 HOH HOH . J 6 HOH A 94 994 994 HOH HOH . J 6 HOH A 95 995 995 HOH HOH . J 6 HOH A 96 996 996 HOH HOH . J 6 HOH A 97 997 997 HOH HOH . J 6 HOH A 98 998 998 HOH HOH . J 6 HOH A 99 999 999 HOH HOH . J 6 HOH A 100 1000 1000 HOH HOH . J 6 HOH A 101 1001 1001 HOH HOH . J 6 HOH A 102 1002 1002 HOH HOH . J 6 HOH A 103 1003 1003 HOH HOH . J 6 HOH A 104 1004 1004 HOH HOH . J 6 HOH A 105 1005 1005 HOH HOH . J 6 HOH A 106 1006 1006 HOH HOH . J 6 HOH A 107 1007 1007 HOH HOH . J 6 HOH A 108 1008 1008 HOH HOH . J 6 HOH A 109 1009 1009 HOH HOH . J 6 HOH A 110 1010 1010 HOH HOH . J 6 HOH A 111 1011 1011 HOH HOH . J 6 HOH A 112 1012 1012 HOH HOH . J 6 HOH A 113 1013 1013 HOH HOH . J 6 HOH A 114 1014 1014 HOH HOH . J 6 HOH A 115 1015 1015 HOH HOH . J 6 HOH A 116 1016 1016 HOH HOH . J 6 HOH A 117 1017 1017 HOH HOH . J 6 HOH A 118 1018 1018 HOH HOH . J 6 HOH A 119 1019 1019 HOH HOH . J 6 HOH A 120 1020 1020 HOH HOH . J 6 HOH A 121 1021 1021 HOH HOH . J 6 HOH A 122 1022 1022 HOH HOH . J 6 HOH A 123 1023 1023 HOH HOH . J 6 HOH A 124 1024 1024 HOH HOH . J 6 HOH A 125 1025 1025 HOH HOH . J 6 HOH A 126 1026 1026 HOH HOH . J 6 HOH A 127 1027 1027 HOH HOH . J 6 HOH A 128 1028 1028 HOH HOH . J 6 HOH A 129 1029 1029 HOH HOH . J 6 HOH A 130 1030 1030 HOH HOH . J 6 HOH A 131 1031 1031 HOH HOH . J 6 HOH A 132 1032 1032 HOH HOH . J 6 HOH A 133 1033 1033 HOH HOH . J 6 HOH A 134 1034 1034 HOH HOH . J 6 HOH A 135 1035 1035 HOH HOH . J 6 HOH A 136 1036 1036 HOH HOH . J 6 HOH A 137 1037 1037 HOH HOH . J 6 HOH A 138 1038 1038 HOH HOH . J 6 HOH A 139 1039 1039 HOH HOH . J 6 HOH A 140 1040 1040 HOH HOH . J 6 HOH A 141 1041 1041 HOH HOH . J 6 HOH A 142 1042 1042 HOH HOH . J 6 HOH A 143 1043 1043 HOH HOH . J 6 HOH A 144 1044 1044 HOH HOH . J 6 HOH A 145 1045 1045 HOH HOH . J 6 HOH A 146 1046 1046 HOH HOH . J 6 HOH A 147 1047 1047 HOH HOH . J 6 HOH A 148 1048 1048 HOH HOH . J 6 HOH A 149 1049 1049 HOH HOH . J 6 HOH A 150 1050 1050 HOH HOH . J 6 HOH A 151 1051 1051 HOH HOH . J 6 HOH A 152 1052 1052 HOH HOH . J 6 HOH A 153 1053 1053 HOH HOH . J 6 HOH A 154 1054 1054 HOH HOH . J 6 HOH A 155 1055 1055 HOH HOH . J 6 HOH A 156 1056 1056 HOH HOH . J 6 HOH A 157 1057 1057 HOH HOH . J 6 HOH A 158 1058 1058 HOH HOH . J 6 HOH A 159 1059 1059 HOH HOH . J 6 HOH A 160 1060 1060 HOH HOH . J 6 HOH A 161 1061 1061 HOH HOH . J 6 HOH A 162 1062 1062 HOH HOH . J 6 HOH A 163 1063 1063 HOH HOH . J 6 HOH A 164 1064 1064 HOH HOH . J 6 HOH A 165 1065 1065 HOH HOH . J 6 HOH A 166 1066 1066 HOH HOH . J 6 HOH A 167 1067 1067 HOH HOH . J 6 HOH A 168 1068 1068 HOH HOH . J 6 HOH A 169 1069 1069 HOH HOH . J 6 HOH A 170 1070 1070 HOH HOH . J 6 HOH A 171 1071 1071 HOH HOH . J 6 HOH A 172 1072 1072 HOH HOH . J 6 HOH A 173 1073 1073 HOH HOH . J 6 HOH A 174 1074 1074 HOH HOH . J 6 HOH A 175 1075 1075 HOH HOH . J 6 HOH A 176 1076 1076 HOH HOH . J 6 HOH A 177 1077 1077 HOH HOH . J 6 HOH A 178 1078 1078 HOH HOH . J 6 HOH A 179 1079 1079 HOH HOH . J 6 HOH A 180 1080 1080 HOH HOH . J 6 HOH A 181 1081 1081 HOH HOH . J 6 HOH A 182 1082 1082 HOH HOH . J 6 HOH A 183 1083 1083 HOH HOH . J 6 HOH A 184 1084 1084 HOH HOH . J 6 HOH A 185 1085 1085 HOH HOH . J 6 HOH A 186 1086 1086 HOH HOH . J 6 HOH A 187 1087 1087 HOH HOH . J 6 HOH A 188 1088 1088 HOH HOH . J 6 HOH A 189 1089 1089 HOH HOH . J 6 HOH A 190 1090 1090 HOH HOH . J 6 HOH A 191 1091 1091 HOH HOH . J 6 HOH A 192 1092 1092 HOH HOH . J 6 HOH A 193 1093 1093 HOH HOH . J 6 HOH A 194 1094 1094 HOH HOH . J 6 HOH A 195 1095 1095 HOH HOH . J 6 HOH A 196 1096 1096 HOH HOH . J 6 HOH A 197 1097 1097 HOH HOH . J 6 HOH A 198 1098 1098 HOH HOH . J 6 HOH A 199 1099 1099 HOH HOH . J 6 HOH A 200 1100 1100 HOH HOH . J 6 HOH A 201 1101 1101 HOH HOH . J 6 HOH A 202 1102 1102 HOH HOH . J 6 HOH A 203 1103 1103 HOH HOH . J 6 HOH A 204 1104 1104 HOH HOH . J 6 HOH A 205 1105 1105 HOH HOH . J 6 HOH A 206 1106 1106 HOH HOH . J 6 HOH A 207 1107 1107 HOH HOH . J 6 HOH A 208 1108 1108 HOH HOH . J 6 HOH A 209 1109 1109 HOH HOH . J 6 HOH A 210 1110 1110 HOH HOH . J 6 HOH A 211 1111 1111 HOH HOH . J 6 HOH A 212 1112 1112 HOH HOH . J 6 HOH A 213 1113 1113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 5 71.518 69.308 19.782 1 55.52 ? C1 EDO 805 A 1 HETATM 2 O O1 EDO . . . F 5 70.796 70.188 18.906 1 33.62 ? O1 EDO 805 A 1 HETATM 3 C C2 EDO . . . F 5 72.115 68.139 19.002 1 51.51 ? C2 EDO 805 A 1 HETATM 4 O O2 EDO . . . F 5 72.951 67.349 19.837 1 51.06 ? O2 EDO 805 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #