data_6EJZ # _model_server_result.job_id 3JRvYOoaKS8xglrh7YL2pA _model_server_result.datetime_utc '2024-11-01 11:36:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ejz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":204}' # _entry.id 6EJZ # _exptl.entry_id 6EJZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EJZ _cell.length_a 82.44 _cell.length_b 82.44 _cell.length_c 75.65 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EJZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,M,N,O,P,Q,W,Y 1 1 B,D,I,J,K,L,R,S,T,U,V,X,Z 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 S N N ? 3 T N N ? 3 U N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id D _struct_conn.ptnr1_label_atom_id NH1 _struct_conn.ptnr1_label_comp_id ARG _struct_conn.ptnr1_label_seq_id 15 _struct_conn.ptnr1_auth_asym_id D _struct_conn.ptnr1_auth_comp_id ARG _struct_conn.ptnr1_auth_seq_id 15 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id V _struct_conn.ptnr2_label_atom_id O3 _struct_conn.ptnr2_label_comp_id IAC _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id D _struct_conn.ptnr2_auth_comp_id IAC _struct_conn.ptnr2_auth_seq_id 205 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.3 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6EJZ _atom_sites.fract_transf_matrix[1][1] 0.01213 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01213 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 IAC A 1 201 120 IAC IAC . F 3 EDO A 1 202 1 EDO EDO . G 3 EDO A 1 203 5 EDO EDO . H 3 EDO A 1 204 11 EDO EDO . I 2 IAC B 1 201 120 IAC IAC . J 3 EDO B 1 202 2 EDO EDO . K 3 EDO B 1 203 4 EDO EDO . L 3 EDO B 1 204 8 EDO EDO . M 2 IAC C 1 201 120 IAC IAC . N 3 EDO C 1 202 3 EDO EDO . O 3 EDO C 1 203 7 EDO EDO . P 3 EDO C 1 204 12 EDO EDO . Q 4 SO4 C 1 205 13 SO4 SO4 . R 2 IAC D 1 201 120 IAC IAC . S 3 EDO D 1 202 6 EDO EDO . T 3 EDO D 1 203 9 EDO EDO . U 3 EDO D 1 204 10 EDO EDO . V 2 IAC D 1 205 14 IAC IAC . W 5 HOH A 1 301 99 HOH HOH . W 5 HOH A 2 302 71 HOH HOH . W 5 HOH A 3 303 149 HOH HOH . W 5 HOH A 4 304 31 HOH HOH . W 5 HOH A 5 305 84 HOH HOH . W 5 HOH A 6 306 12 HOH HOH . W 5 HOH A 7 307 113 HOH HOH . W 5 HOH A 8 308 26 HOH HOH . W 5 HOH A 9 309 48 HOH HOH . W 5 HOH A 10 310 164 HOH HOH . W 5 HOH A 11 311 33 HOH HOH . W 5 HOH A 12 312 44 HOH HOH . W 5 HOH A 13 313 122 HOH HOH . W 5 HOH A 14 314 83 HOH HOH . W 5 HOH A 15 315 146 HOH HOH . W 5 HOH A 16 316 115 HOH HOH . W 5 HOH A 17 317 23 HOH HOH . W 5 HOH A 18 318 73 HOH HOH . W 5 HOH A 19 319 126 HOH HOH . W 5 HOH A 20 320 38 HOH HOH . W 5 HOH A 21 321 143 HOH HOH . W 5 HOH A 22 322 103 HOH HOH . W 5 HOH A 23 323 65 HOH HOH . W 5 HOH A 24 324 28 HOH HOH . W 5 HOH A 25 325 89 HOH HOH . W 5 HOH A 26 326 171 HOH HOH . W 5 HOH A 27 327 100 HOH HOH . W 5 HOH A 28 328 53 HOH HOH . W 5 HOH A 29 329 147 HOH HOH . W 5 HOH A 30 330 134 HOH HOH . W 5 HOH A 31 331 191 HOH HOH . W 5 HOH A 32 332 110 HOH HOH . W 5 HOH A 33 333 157 HOH HOH . W 5 HOH A 34 334 88 HOH HOH . W 5 HOH A 35 335 36 HOH HOH . W 5 HOH A 36 336 10 HOH HOH . W 5 HOH A 37 337 123 HOH HOH . W 5 HOH A 38 338 81 HOH HOH . W 5 HOH A 39 339 80 HOH HOH . W 5 HOH A 40 340 43 HOH HOH . W 5 HOH A 41 341 194 HOH HOH . W 5 HOH A 42 342 145 HOH HOH . W 5 HOH A 43 343 202 HOH HOH . W 5 HOH A 44 344 179 HOH HOH . W 5 HOH A 45 345 212 HOH HOH . W 5 HOH A 46 346 133 HOH HOH . W 5 HOH A 47 347 177 HOH HOH . W 5 HOH A 48 348 63 HOH HOH . W 5 HOH A 49 349 144 HOH HOH . W 5 HOH A 50 350 82 HOH HOH . W 5 HOH A 51 351 206 HOH HOH . W 5 HOH A 52 352 79 HOH HOH . W 5 HOH A 53 353 195 HOH HOH . W 5 HOH A 54 354 109 HOH HOH . W 5 HOH A 55 355 118 HOH HOH . W 5 HOH A 56 356 200 HOH HOH . W 5 HOH A 57 357 60 HOH HOH . W 5 HOH A 58 358 208 HOH HOH . W 5 HOH A 59 359 136 HOH HOH . W 5 HOH A 60 360 209 HOH HOH . W 5 HOH A 61 361 215 HOH HOH . X 5 HOH B 1 301 153 HOH HOH . X 5 HOH B 2 302 193 HOH HOH . X 5 HOH B 3 303 9 HOH HOH . X 5 HOH B 4 304 129 HOH HOH . X 5 HOH B 5 305 24 HOH HOH . X 5 HOH B 6 306 68 HOH HOH . X 5 HOH B 7 307 29 HOH HOH . X 5 HOH B 8 308 114 HOH HOH . X 5 HOH B 9 309 127 HOH HOH . X 5 HOH B 10 310 120 HOH HOH . X 5 HOH B 11 311 2 HOH HOH . X 5 HOH B 12 312 8 HOH HOH . X 5 HOH B 13 313 46 HOH HOH . X 5 HOH B 14 314 6 HOH HOH . X 5 HOH B 15 315 59 HOH HOH . X 5 HOH B 16 316 16 HOH HOH . X 5 HOH B 17 317 51 HOH HOH . X 5 HOH B 18 318 148 HOH HOH . X 5 HOH B 19 319 213 HOH HOH . X 5 HOH B 20 320 35 HOH HOH . X 5 HOH B 21 321 58 HOH HOH . X 5 HOH B 22 322 106 HOH HOH . X 5 HOH B 23 323 107 HOH HOH . X 5 HOH B 24 324 163 HOH HOH . X 5 HOH B 25 325 69 HOH HOH . X 5 HOH B 26 326 138 HOH HOH . X 5 HOH B 27 327 1 HOH HOH . X 5 HOH B 28 328 111 HOH HOH . X 5 HOH B 29 329 20 HOH HOH . X 5 HOH B 30 330 172 HOH HOH . X 5 HOH B 31 331 102 HOH HOH . X 5 HOH B 32 332 93 HOH HOH . X 5 HOH B 33 333 37 HOH HOH . X 5 HOH B 34 334 165 HOH HOH . X 5 HOH B 35 335 30 HOH HOH . X 5 HOH B 36 336 121 HOH HOH . X 5 HOH B 37 337 117 HOH HOH . X 5 HOH B 38 338 131 HOH HOH . X 5 HOH B 39 339 196 HOH HOH . X 5 HOH B 40 340 204 HOH HOH . X 5 HOH B 41 341 182 HOH HOH . X 5 HOH B 42 342 139 HOH HOH . X 5 HOH B 43 343 154 HOH HOH . X 5 HOH B 44 344 86 HOH HOH . X 5 HOH B 45 345 25 HOH HOH . X 5 HOH B 46 346 207 HOH HOH . X 5 HOH B 47 347 128 HOH HOH . X 5 HOH B 48 348 220 HOH HOH . X 5 HOH B 49 349 140 HOH HOH . X 5 HOH B 50 350 198 HOH HOH . Y 5 HOH C 1 301 50 HOH HOH . Y 5 HOH C 2 302 32 HOH HOH . Y 5 HOH C 3 303 169 HOH HOH . Y 5 HOH C 4 304 104 HOH HOH . Y 5 HOH C 5 305 57 HOH HOH . Y 5 HOH C 6 306 67 HOH HOH . Y 5 HOH C 7 307 141 HOH HOH . Y 5 HOH C 8 308 160 HOH HOH . Y 5 HOH C 9 309 3 HOH HOH . Y 5 HOH C 10 310 112 HOH HOH . Y 5 HOH C 11 311 161 HOH HOH . Y 5 HOH C 12 312 34 HOH HOH . Y 5 HOH C 13 313 13 HOH HOH . Y 5 HOH C 14 314 19 HOH HOH . Y 5 HOH C 15 315 85 HOH HOH . Y 5 HOH C 16 316 17 HOH HOH . Y 5 HOH C 17 317 52 HOH HOH . Y 5 HOH C 18 318 22 HOH HOH . Y 5 HOH C 19 319 155 HOH HOH . Y 5 HOH C 20 320 95 HOH HOH . Y 5 HOH C 21 321 7 HOH HOH . Y 5 HOH C 22 322 56 HOH HOH . Y 5 HOH C 23 323 87 HOH HOH . Y 5 HOH C 24 324 152 HOH HOH . Y 5 HOH C 25 325 174 HOH HOH . Y 5 HOH C 26 326 159 HOH HOH . Y 5 HOH C 27 327 76 HOH HOH . Y 5 HOH C 28 328 11 HOH HOH . Y 5 HOH C 29 329 66 HOH HOH . Y 5 HOH C 30 330 180 HOH HOH . Y 5 HOH C 31 331 135 HOH HOH . Y 5 HOH C 32 332 55 HOH HOH . Y 5 HOH C 33 333 62 HOH HOH . Y 5 HOH C 34 334 192 HOH HOH . Y 5 HOH C 35 335 132 HOH HOH . Y 5 HOH C 36 336 105 HOH HOH . Y 5 HOH C 37 337 96 HOH HOH . Y 5 HOH C 38 338 97 HOH HOH . Y 5 HOH C 39 339 27 HOH HOH . Y 5 HOH C 40 340 214 HOH HOH . Y 5 HOH C 41 341 108 HOH HOH . Y 5 HOH C 42 342 41 HOH HOH . Y 5 HOH C 43 343 181 HOH HOH . Y 5 HOH C 44 344 203 HOH HOH . Y 5 HOH C 45 345 205 HOH HOH . Y 5 HOH C 46 346 78 HOH HOH . Y 5 HOH C 47 347 77 HOH HOH . Y 5 HOH C 48 348 75 HOH HOH . Y 5 HOH C 49 349 210 HOH HOH . Y 5 HOH C 50 350 188 HOH HOH . Y 5 HOH C 51 351 199 HOH HOH . Y 5 HOH C 52 352 190 HOH HOH . Y 5 HOH C 53 353 74 HOH HOH . Y 5 HOH C 54 354 216 HOH HOH . Z 5 HOH D 1 301 151 HOH HOH . Z 5 HOH D 2 302 119 HOH HOH . Z 5 HOH D 3 303 197 HOH HOH . Z 5 HOH D 4 304 184 HOH HOH . Z 5 HOH D 5 305 217 HOH HOH . Z 5 HOH D 6 306 185 HOH HOH . Z 5 HOH D 7 307 54 HOH HOH . Z 5 HOH D 8 308 45 HOH HOH . Z 5 HOH D 9 309 116 HOH HOH . Z 5 HOH D 10 310 91 HOH HOH . Z 5 HOH D 11 311 178 HOH HOH . Z 5 HOH D 12 312 137 HOH HOH . Z 5 HOH D 13 313 42 HOH HOH . Z 5 HOH D 14 314 218 HOH HOH . Z 5 HOH D 15 315 101 HOH HOH . Z 5 HOH D 16 316 162 HOH HOH . Z 5 HOH D 17 317 189 HOH HOH . Z 5 HOH D 18 318 18 HOH HOH . Z 5 HOH D 19 319 4 HOH HOH . Z 5 HOH D 20 320 186 HOH HOH . Z 5 HOH D 21 321 124 HOH HOH . Z 5 HOH D 22 322 92 HOH HOH . Z 5 HOH D 23 323 187 HOH HOH . Z 5 HOH D 24 324 72 HOH HOH . Z 5 HOH D 25 325 168 HOH HOH . Z 5 HOH D 26 326 90 HOH HOH . Z 5 HOH D 27 327 98 HOH HOH . Z 5 HOH D 28 328 156 HOH HOH . Z 5 HOH D 29 329 15 HOH HOH . Z 5 HOH D 30 330 201 HOH HOH . Z 5 HOH D 31 331 5 HOH HOH . Z 5 HOH D 32 332 176 HOH HOH . Z 5 HOH D 33 333 70 HOH HOH . Z 5 HOH D 34 334 21 HOH HOH . Z 5 HOH D 35 335 64 HOH HOH . Z 5 HOH D 36 336 158 HOH HOH . Z 5 HOH D 37 337 47 HOH HOH . Z 5 HOH D 38 338 40 HOH HOH . Z 5 HOH D 39 339 14 HOH HOH . Z 5 HOH D 40 340 173 HOH HOH . Z 5 HOH D 41 341 170 HOH HOH . Z 5 HOH D 42 342 49 HOH HOH . Z 5 HOH D 43 343 94 HOH HOH . Z 5 HOH D 44 344 39 HOH HOH . Z 5 HOH D 45 345 167 HOH HOH . Z 5 HOH D 46 346 125 HOH HOH . Z 5 HOH D 47 347 150 HOH HOH . Z 5 HOH D 48 348 166 HOH HOH . Z 5 HOH D 49 349 142 HOH HOH . Z 5 HOH D 50 350 211 HOH HOH . Z 5 HOH D 51 351 61 HOH HOH . Z 5 HOH D 52 352 183 HOH HOH . Z 5 HOH D 53 353 130 HOH HOH . Z 5 HOH D 54 354 175 HOH HOH . Z 5 HOH D 55 355 219 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . U 3 15.072 -22.683 10.379 1 79.45 ? C1 EDO 204 D 1 HETATM 2 O O1 EDO . . . U 3 14.292 -23.875 10.557 1 75.23 ? O1 EDO 204 D 1 HETATM 3 C C2 EDO . . . U 3 14.164 -21.529 9.962 1 81.13 ? C2 EDO 204 D 1 HETATM 4 O O2 EDO . . . U 3 14.934 -20.348 9.688 1 79.73 ? O2 EDO 204 D 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #