data_6EKI
#
_model_server_result.job_id            artH3dm1qtG_tJkvqTiYfg 
_model_server_result.datetime_utc      '2025-08-30 17:00:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6eki 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":301}' 
#
_entry.id    6EKI 
#
_exptl.entry_id    6EKI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         88.38 
_cell.angle_beta          82.84 
_cell.angle_gamma         84.22 
_cell.entry_id            6EKI 
_cell.length_a            46.317 
_cell.length_b            71.276 
_cell.length_c            103.344 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6EKI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
D,J,P 1 1 
A,G,M 1 2 
A,G,M 2 1 
D,J,P 2 3 
B,F,H,L,N,R 3 1 
C,E,I,K,O,Q 4 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 1_565 x,y+1,z 1 0 0 0 1 0 0 0 1 7.178136 70.913627 0 
3 'crystal symmetry operation' 1_545 x,y-1,z 1 0 0 0 1 0 0 0 1 -7.178136 -70.913627 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 27 A CYS 54 1_555 A SG CYS 179 A CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
disulf ? disulf2 B SG CYS 27 B CYS 54 1_555 B SG CYS 179 B CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf3 C SG CYS 27 C CYS 54 1_555 C SG CYS 179 C CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
disulf ? disulf4 D SG CYS 27 D CYS 54 1_555 D SG CYS 179 D CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf5 E SG CYS 27 E CYS 54 1_555 E SG CYS 179 E CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
disulf ? disulf6 F SG CYS 27 F CYS 54 1_555 F SG CYS 179 F CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
metalc ? metalc1 A NE2 HIS 90 A HIS 117 1_555 G ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
metalc ? metalc2 A NE2 HIS 92 A HIS 119 1_555 G ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc3 A ND1 HIS 109 A HIS 136 1_555 G ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc4 B NE2 HIS 90 B HIS 117 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc5 B NE2 HIS 92 B HIS 119 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc6 B ND1 HIS 109 B HIS 136 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc7 C NE2 HIS 90 C HIS 117 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc8 C NE2 HIS 92 C HIS 119 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc9 C ND1 HIS 109 C HIS 136 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? 
metalc ? metalc10 D NE2 HIS 90 D HIS 117 1_555 J ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc11 D NE2 HIS 92 D HIS 119 1_555 J ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc12 D ND1 HIS 109 D HIS 136 1_555 J ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc13 E NE2 HIS 90 E HIS 117 1_555 K ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.86 ? 
metalc ? metalc14 E NE2 HIS 92 E HIS 119 1_555 K ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc15 E ND1 HIS 109 E HIS 136 1_555 K ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? 
metalc ? metalc16 F NE2 HIS 90 F HIS 117 1_555 L ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
metalc ? metalc17 F NE2 HIS 92 F HIS 119 1_555 L ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc18 F ND1 HIS 109 F HIS 136 1_555 L ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6EKI 
_atom_sites.fract_transf_matrix[1][1]    0.02159 
_atom_sites.fract_transf_matrix[1][2]    -0.002186 
_atom_sites.fract_transf_matrix[1][3]    -0.002677 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014102 
_atom_sites.fract_transf_matrix[2][3]    -0.000226 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009754 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 ZN A 1 301 301 ZN ZN . 
H 2 ZN B 1 301 301 ZN ZN . 
I 2 ZN C 1 301 301 ZN ZN . 
J 2 ZN D 1 301 301 ZN ZN . 
K 2 ZN E 1 301 301 ZN ZN . 
L 2 ZN F 1 301 301 ZN ZN . 
M 3 HOH A 1 401 67 HOH HOH . 
M 3 HOH A 2 402 10 HOH HOH . 
M 3 HOH A 3 403 4 HOH HOH . 
M 3 HOH A 4 404 40 HOH HOH . 
M 3 HOH A 5 405 48 HOH HOH . 
M 3 HOH A 6 406 49 HOH HOH . 
M 3 HOH A 7 407 37 HOH HOH . 
M 3 HOH A 8 408 2 HOH HOH . 
M 3 HOH A 9 409 15 HOH HOH . 
M 3 HOH A 10 410 59 HOH HOH . 
M 3 HOH A 11 411 75 HOH HOH . 
N 3 HOH B 1 401 25 HOH HOH . 
N 3 HOH B 2 402 41 HOH HOH . 
N 3 HOH B 3 403 23 HOH HOH . 
N 3 HOH B 4 404 45 HOH HOH . 
N 3 HOH B 5 405 3 HOH HOH . 
N 3 HOH B 6 406 50 HOH HOH . 
N 3 HOH B 7 407 1 HOH HOH . 
N 3 HOH B 8 408 6 HOH HOH . 
N 3 HOH B 9 409 8 HOH HOH . 
N 3 HOH B 10 410 18 HOH HOH . 
N 3 HOH B 11 411 9 HOH HOH . 
N 3 HOH B 12 412 11 HOH HOH . 
N 3 HOH B 13 413 64 HOH HOH . 
N 3 HOH B 14 414 76 HOH HOH . 
O 3 HOH C 1 401 5 HOH HOH . 
O 3 HOH C 2 402 68 HOH HOH . 
O 3 HOH C 3 403 42 HOH HOH . 
O 3 HOH C 4 404 24 HOH HOH . 
O 3 HOH C 5 405 13 HOH HOH . 
O 3 HOH C 6 406 56 HOH HOH . 
O 3 HOH C 7 407 51 HOH HOH . 
O 3 HOH C 8 408 21 HOH HOH . 
O 3 HOH C 9 409 60 HOH HOH . 
O 3 HOH C 10 410 65 HOH HOH . 
O 3 HOH C 11 411 71 HOH HOH . 
P 3 HOH D 1 401 63 HOH HOH . 
P 3 HOH D 2 402 70 HOH HOH . 
P 3 HOH D 3 403 12 HOH HOH . 
P 3 HOH D 4 404 54 HOH HOH . 
P 3 HOH D 5 405 47 HOH HOH . 
P 3 HOH D 6 406 39 HOH HOH . 
P 3 HOH D 7 407 55 HOH HOH . 
P 3 HOH D 8 408 7 HOH HOH . 
P 3 HOH D 9 409 19 HOH HOH . 
P 3 HOH D 10 410 20 HOH HOH . 
P 3 HOH D 11 411 27 HOH HOH . 
P 3 HOH D 12 412 26 HOH HOH . 
P 3 HOH D 13 413 30 HOH HOH . 
P 3 HOH D 14 414 69 HOH HOH . 
P 3 HOH D 15 415 29 HOH HOH . 
P 3 HOH D 16 416 72 HOH HOH . 
Q 3 HOH E 1 401 33 HOH HOH . 
Q 3 HOH E 2 402 17 HOH HOH . 
Q 3 HOH E 3 403 52 HOH HOH . 
Q 3 HOH E 4 404 43 HOH HOH . 
Q 3 HOH E 5 405 57 HOH HOH . 
Q 3 HOH E 6 406 61 HOH HOH . 
Q 3 HOH E 7 407 16 HOH HOH . 
Q 3 HOH E 8 408 14 HOH HOH . 
Q 3 HOH E 9 409 66 HOH HOH . 
Q 3 HOH E 10 410 34 HOH HOH . 
Q 3 HOH E 11 411 36 HOH HOH . 
Q 3 HOH E 12 412 73 HOH HOH . 
R 3 HOH F 1 401 44 HOH HOH . 
R 3 HOH F 2 402 46 HOH HOH . 
R 3 HOH F 3 403 22 HOH HOH . 
R 3 HOH F 4 404 32 HOH HOH . 
R 3 HOH F 5 405 58 HOH HOH . 
R 3 HOH F 6 406 62 HOH HOH . 
R 3 HOH F 7 407 53 HOH HOH . 
R 3 HOH F 8 408 28 HOH HOH . 
R 3 HOH F 9 409 77 HOH HOH . 
R 3 HOH F 10 410 38 HOH HOH . 
R 3 HOH F 11 411 35 HOH HOH . 
R 3 HOH F 12 412 74 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         L 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               40.917 
_atom_site.Cartn_y               26.233 
_atom_site.Cartn_z               46.33 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        45.44 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          F 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           333 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#