data_6EL5 # _model_server_result.job_id Pd3lHk-8_IDipcOpgjtEaQ _model_server_result.datetime_utc '2024-11-23 14:42:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6el5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6EL5 # _exptl.entry_id 6EL5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 433.864 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-(2-CHLORO-3,4,5-TRIMETHOXY-BENZYL)-2-FLUORO-9-PENT-4-YLNYL-9H-PURIN-6-YLAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EL5 _cell.length_a 66.841 _cell.length_b 91.516 _cell.length_c 98.381 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EL5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H21 Cl F N5 O3' _chem_comp.formula_weight 433.864 _chem_comp.id PU1 _chem_comp.mon_nstd_flag . _chem_comp.name 8-(2-CHLORO-3,4,5-TRIMETHOXY-BENZYL)-2-FLUORO-9-PENT-4-YLNYL-9H-PURIN-6-YLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C13 PU1 sing 264 n n C13 C15 PU1 doub 265 n y C13 C12 PU1 sing 266 n y C15 O3 PU1 sing 267 n n C15 C17 PU1 sing 268 n y O3 C20 PU1 sing 269 n n C20 H201 PU1 sing 270 n n C20 H202 PU1 sing 271 n n C20 H203 PU1 sing 272 n n C17 O2 PU1 sing 273 n n C17 C16 PU1 doub 274 n y O2 C19 PU1 sing 275 n n C19 H191 PU1 sing 276 n n C19 H192 PU1 sing 277 n n C19 H193 PU1 sing 278 n n C16 O1 PU1 sing 279 n n C16 C14 PU1 sing 280 n y O1 C18 PU1 sing 281 n n C18 H181 PU1 sing 282 n n C18 H182 PU1 sing 283 n n C18 H183 PU1 sing 284 n n C14 C12 PU1 doub 285 n y C14 H14 PU1 sing 286 n n C12 C6 PU1 sing 287 n n C6 C5 PU1 sing 288 n n C6 H6C1 PU1 sing 289 n n C6 H6C2 PU1 sing 290 n n C5 N3 PU1 doub 291 n y C5 N4 PU1 sing 292 n y N3 C2 PU1 sing 293 n y C2 C3 PU1 doub 294 n y C2 C1 PU1 sing 295 n y C3 N5 PU1 sing 296 n n C3 N2 PU1 sing 297 n y N5 H5N1 PU1 sing 298 n n N5 H5N2 PU1 sing 299 n n C1 N1 PU1 doub 300 n y C1 N4 PU1 sing 301 n y N1 C4 PU1 sing 302 n y C4 N2 PU1 doub 303 n y C4 F PU1 sing 304 n n N4 C7 PU1 sing 305 n n C7 C8 PU1 sing 306 n n C7 H7C1 PU1 sing 307 n n C7 H7C2 PU1 sing 308 n n C8 C9 PU1 sing 309 n n C8 H8C1 PU1 sing 310 n n C8 H8C2 PU1 sing 311 n n C9 C10 PU1 sing 312 n n C9 H9C1 PU1 sing 313 n n C9 H9C2 PU1 sing 314 n n C10 C11 PU1 trip 315 n n C11 H11 PU1 sing 316 n n # _atom_sites.entry_id 6EL5 _atom_sites.fract_transf_matrix[1][1] 0.014961 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010927 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010165 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PU1 A 1 301 1 PU1 INH . C 3 HOH A 1 401 50 HOH HOH . C 3 HOH A 2 402 43 HOH HOH . C 3 HOH A 3 403 30 HOH HOH . C 3 HOH A 4 404 54 HOH HOH . C 3 HOH A 5 405 12 HOH HOH . C 3 HOH A 6 406 66 HOH HOH . C 3 HOH A 7 407 143 HOH HOH . C 3 HOH A 8 408 41 HOH HOH . C 3 HOH A 9 409 76 HOH HOH . C 3 HOH A 10 410 39 HOH HOH . C 3 HOH A 11 411 53 HOH HOH . C 3 HOH A 12 412 118 HOH HOH . C 3 HOH A 13 413 27 HOH HOH . C 3 HOH A 14 414 10 HOH HOH . C 3 HOH A 15 415 34 HOH HOH . C 3 HOH A 16 416 45 HOH HOH . C 3 HOH A 17 417 19 HOH HOH . C 3 HOH A 18 418 20 HOH HOH . C 3 HOH A 19 419 15 HOH HOH . C 3 HOH A 20 420 183 HOH HOH . C 3 HOH A 21 421 104 HOH HOH . C 3 HOH A 22 422 46 HOH HOH . C 3 HOH A 23 423 72 HOH HOH . C 3 HOH A 24 424 18 HOH HOH . C 3 HOH A 25 425 49 HOH HOH . C 3 HOH A 26 426 1 HOH HOH . C 3 HOH A 27 427 129 HOH HOH . C 3 HOH A 28 428 64 HOH HOH . C 3 HOH A 29 429 9 HOH HOH . C 3 HOH A 30 430 131 HOH HOH . C 3 HOH A 31 431 35 HOH HOH . C 3 HOH A 32 432 8 HOH HOH . C 3 HOH A 33 433 83 HOH HOH . C 3 HOH A 34 434 47 HOH HOH . C 3 HOH A 35 435 82 HOH HOH . C 3 HOH A 36 436 38 HOH HOH . C 3 HOH A 37 437 148 HOH HOH . C 3 HOH A 38 438 164 HOH HOH . C 3 HOH A 39 439 21 HOH HOH . C 3 HOH A 40 440 84 HOH HOH . C 3 HOH A 41 441 99 HOH HOH . C 3 HOH A 42 442 77 HOH HOH . C 3 HOH A 43 443 26 HOH HOH . C 3 HOH A 44 444 142 HOH HOH . C 3 HOH A 45 445 108 HOH HOH . C 3 HOH A 46 446 3 HOH HOH . C 3 HOH A 47 447 171 HOH HOH . C 3 HOH A 48 448 152 HOH HOH . C 3 HOH A 49 449 133 HOH HOH . C 3 HOH A 50 450 119 HOH HOH . C 3 HOH A 51 451 80 HOH HOH . C 3 HOH A 52 452 139 HOH HOH . C 3 HOH A 53 453 136 HOH HOH . C 3 HOH A 54 454 174 HOH HOH . C 3 HOH A 55 455 117 HOH HOH . C 3 HOH A 56 456 70 HOH HOH . C 3 HOH A 57 457 40 HOH HOH . C 3 HOH A 58 458 109 HOH HOH . C 3 HOH A 59 459 122 HOH HOH . C 3 HOH A 60 460 51 HOH HOH . C 3 HOH A 61 461 120 HOH HOH . C 3 HOH A 62 462 23 HOH HOH . C 3 HOH A 63 463 67 HOH HOH . C 3 HOH A 64 464 17 HOH HOH . C 3 HOH A 65 465 149 HOH HOH . C 3 HOH A 66 466 31 HOH HOH . C 3 HOH A 67 467 116 HOH HOH . C 3 HOH A 68 468 79 HOH HOH . C 3 HOH A 69 469 91 HOH HOH . C 3 HOH A 70 470 73 HOH HOH . C 3 HOH A 71 471 25 HOH HOH . C 3 HOH A 72 472 11 HOH HOH . C 3 HOH A 73 473 58 HOH HOH . C 3 HOH A 74 474 22 HOH HOH . C 3 HOH A 75 475 13 HOH HOH . C 3 HOH A 76 476 6 HOH HOH . C 3 HOH A 77 477 32 HOH HOH . C 3 HOH A 78 478 36 HOH HOH . C 3 HOH A 79 479 56 HOH HOH . C 3 HOH A 80 480 2 HOH HOH . C 3 HOH A 81 481 97 HOH HOH . C 3 HOH A 82 482 78 HOH HOH . C 3 HOH A 83 483 167 HOH HOH . C 3 HOH A 84 484 44 HOH HOH . C 3 HOH A 85 485 165 HOH HOH . C 3 HOH A 86 486 163 HOH HOH . C 3 HOH A 87 487 159 HOH HOH . C 3 HOH A 88 488 145 HOH HOH . C 3 HOH A 89 489 105 HOH HOH . C 3 HOH A 90 490 173 HOH HOH . C 3 HOH A 91 491 61 HOH HOH . C 3 HOH A 92 492 128 HOH HOH . C 3 HOH A 93 493 59 HOH HOH . C 3 HOH A 94 494 5 HOH HOH . C 3 HOH A 95 495 121 HOH HOH . C 3 HOH A 96 496 151 HOH HOH . C 3 HOH A 97 497 172 HOH HOH . C 3 HOH A 98 498 48 HOH HOH . C 3 HOH A 99 499 162 HOH HOH . C 3 HOH A 100 500 60 HOH HOH . C 3 HOH A 101 501 75 HOH HOH . C 3 HOH A 102 502 28 HOH HOH . C 3 HOH A 103 503 103 HOH HOH . C 3 HOH A 104 504 29 HOH HOH . C 3 HOH A 105 505 4 HOH HOH . C 3 HOH A 106 506 88 HOH HOH . C 3 HOH A 107 507 52 HOH HOH . C 3 HOH A 108 508 113 HOH HOH . C 3 HOH A 109 509 96 HOH HOH . C 3 HOH A 110 510 110 HOH HOH . C 3 HOH A 111 511 138 HOH HOH . C 3 HOH A 112 512 37 HOH HOH . C 3 HOH A 113 513 98 HOH HOH . C 3 HOH A 114 514 132 HOH HOH . C 3 HOH A 115 515 71 HOH HOH . C 3 HOH A 116 516 85 HOH HOH . C 3 HOH A 117 517 130 HOH HOH . C 3 HOH A 118 518 81 HOH HOH . C 3 HOH A 119 519 16 HOH HOH . C 3 HOH A 120 520 100 HOH HOH . C 3 HOH A 121 521 169 HOH HOH . C 3 HOH A 122 522 112 HOH HOH . C 3 HOH A 123 523 160 HOH HOH . C 3 HOH A 124 524 93 HOH HOH . C 3 HOH A 125 525 124 HOH HOH . C 3 HOH A 126 526 155 HOH HOH . C 3 HOH A 127 527 33 HOH HOH . C 3 HOH A 128 528 7 HOH HOH . C 3 HOH A 129 529 127 HOH HOH . C 3 HOH A 130 530 69 HOH HOH . C 3 HOH A 131 531 89 HOH HOH . C 3 HOH A 132 532 170 HOH HOH . C 3 HOH A 133 533 74 HOH HOH . C 3 HOH A 134 534 57 HOH HOH . C 3 HOH A 135 535 86 HOH HOH . C 3 HOH A 136 536 90 HOH HOH . C 3 HOH A 137 537 111 HOH HOH . C 3 HOH A 138 538 55 HOH HOH . C 3 HOH A 139 539 65 HOH HOH . C 3 HOH A 140 540 150 HOH HOH . C 3 HOH A 141 541 126 HOH HOH . C 3 HOH A 142 542 154 HOH HOH . C 3 HOH A 143 543 188 HOH HOH . C 3 HOH A 144 544 95 HOH HOH . C 3 HOH A 145 545 94 HOH HOH . C 3 HOH A 146 546 42 HOH HOH . C 3 HOH A 147 547 134 HOH HOH . C 3 HOH A 148 548 114 HOH HOH . C 3 HOH A 149 549 153 HOH HOH . C 3 HOH A 150 550 24 HOH HOH . C 3 HOH A 151 551 146 HOH HOH . C 3 HOH A 152 552 135 HOH HOH . C 3 HOH A 153 553 14 HOH HOH . C 3 HOH A 154 554 101 HOH HOH . C 3 HOH A 155 555 168 HOH HOH . C 3 HOH A 156 556 141 HOH HOH . C 3 HOH A 157 557 92 HOH HOH . C 3 HOH A 158 558 102 HOH HOH . C 3 HOH A 159 559 144 HOH HOH . C 3 HOH A 160 560 115 HOH HOH . C 3 HOH A 161 561 87 HOH HOH . C 3 HOH A 162 562 68 HOH HOH . C 3 HOH A 163 563 62 HOH HOH . C 3 HOH A 164 564 107 HOH HOH . C 3 HOH A 165 565 166 HOH HOH . C 3 HOH A 166 566 125 HOH HOH . C 3 HOH A 167 567 63 HOH HOH . C 3 HOH A 168 568 157 HOH HOH . C 3 HOH A 169 569 137 HOH HOH . C 3 HOH A 170 570 180 HOH HOH . C 3 HOH A 171 571 161 HOH HOH . C 3 HOH A 172 572 106 HOH HOH . C 3 HOH A 173 573 175 HOH HOH . C 3 HOH A 174 574 147 HOH HOH . C 3 HOH A 175 575 156 HOH HOH . C 3 HOH A 176 576 179 HOH HOH . C 3 HOH A 177 577 176 HOH HOH . C 3 HOH A 178 578 185 HOH HOH . C 3 HOH A 179 579 123 HOH HOH . C 3 HOH A 180 580 182 HOH HOH . C 3 HOH A 181 581 181 HOH HOH . C 3 HOH A 182 582 140 HOH HOH . C 3 HOH A 183 583 184 HOH HOH . C 3 HOH A 184 584 187 HOH HOH . C 3 HOH A 185 585 186 HOH HOH . C 3 HOH A 186 586 158 HOH HOH . C 3 HOH A 187 587 178 HOH HOH . C 3 HOH A 188 588 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL PU1 . . . B 2 2.239 31.781 24.812 1 31.27 ? CL PU1 301 A 1 HETATM 2 C C13 PU1 . . . B 2 3.778 32.597 24.889 1 33.53 ? C13 PU1 301 A 1 HETATM 3 C C15 PU1 . . . B 2 4.899 31.951 24.332 1 37.07 ? C15 PU1 301 A 1 HETATM 4 O O3 PU1 . . . B 2 4.738 30.856 23.523 1 39.79 ? O3 PU1 301 A 1 HETATM 5 C C20 PU1 . . . B 2 4.874 29.538 24 1 40.53 ? C20 PU1 301 A 1 HETATM 6 C C17 PU1 . . . B 2 6.151 32.579 24.359 1 39.62 ? C17 PU1 301 A 1 HETATM 7 O O2 PU1 . . . B 2 7.263 31.961 23.848 1 45.9 ? O2 PU1 301 A 1 HETATM 8 C C19 PU1 . . . B 2 7.494 31.883 22.434 1 47.85 ? C19 PU1 301 A 1 HETATM 9 C C16 PU1 . . . B 2 6.311 33.785 25.045 1 34.98 ? C16 PU1 301 A 1 HETATM 10 O O1 PU1 . . . B 2 7.57 34.315 25.128 1 34.41 ? O1 PU1 301 A 1 HETATM 11 C C18 PU1 . . . B 2 7.796 35.449 25.982 1 31.6 ? C18 PU1 301 A 1 HETATM 12 C C14 PU1 . . . B 2 5.196 34.413 25.619 1 30.1 ? C14 PU1 301 A 1 HETATM 13 C C12 PU1 . . . B 2 3.934 33.831 25.554 1 28.35 ? C12 PU1 301 A 1 HETATM 14 C C6 PU1 . . . B 2 2.805 34.573 26.249 1 26.97 ? C6 PU1 301 A 1 HETATM 15 C C5 PU1 . . . B 2 1.668 34.876 25.298 1 29.02 ? C5 PU1 301 A 1 HETATM 16 N N3 PU1 . . . B 2 0.45 34.499 25.527 1 25.77 ? N3 PU1 301 A 1 HETATM 17 C C2 PU1 . . . B 2 -0.326 34.851 24.494 1 26.74 ? C2 PU1 301 A 1 HETATM 18 C C3 PU1 . . . B 2 -1.68 34.686 24.192 1 27.05 ? C3 PU1 301 A 1 HETATM 19 N N5 PU1 . . . B 2 -2.532 34.106 25.111 1 24.42 ? N5 PU1 301 A 1 HETATM 20 C C1 PU1 . . . B 2 0.498 35.524 23.586 1 30.62 ? C1 PU1 301 A 1 HETATM 21 N N1 PU1 . . . B 2 -0.011 35.971 22.459 1 31.33 ? N1 PU1 301 A 1 HETATM 22 C C4 PU1 . . . B 2 -1.261 35.739 22.17 1 29.68 ? C4 PU1 301 A 1 HETATM 23 N N2 PU1 . . . B 2 -2.111 35.144 23.01 1 29.87 ? N2 PU1 301 A 1 HETATM 24 N N4 PU1 . . . B 2 1.75 35.552 24.115 1 29.09 ? N4 PU1 301 A 1 HETATM 25 C C7 PU1 . . . B 2 2.914 36.209 23.486 1 31.42 ? C7 PU1 301 A 1 HETATM 26 C C8 PU1 . . . B 2 2.875 37.733 23.681 1 35.42 ? C8 PU1 301 A 1 HETATM 27 C C9 PU1 . . . B 2 2.962 38.133 25.154 1 43.16 ? C9 PU1 301 A 1 HETATM 28 C C10 PU1 . . . B 2 4.335 38.065 25.712 1 51.2 ? C10 PU1 301 A 1 HETATM 29 C C11 PU1 . . . B 2 5.41 38.033 26.2 1 51.1 ? C11 PU1 301 A 1 HETATM 30 F F PU1 . . . B 2 -1.656 36.195 20.981 1 30.56 ? F PU1 301 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 420 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 30 #