data_6EMG # _model_server_result.job_id jthEHBa8b3V_Rwo_viShhg _model_server_result.datetime_utc '2025-07-19 17:22:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6emg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":310}' # _entry.id 6EMG # _exptl.entry_id 6EMG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6EMG _cell.length_a 214.259 _cell.length_b 214.259 _cell.length_c 124.785 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EMG _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,O 1 1 B,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 92 n n N1 C6 EPE sing 93 n n N1 C9 EPE sing 94 n n C2 C3 EPE sing 95 n n C2 H21 EPE sing 96 n n C2 H22 EPE sing 97 n n C3 N4 EPE sing 98 n n C3 H31 EPE sing 99 n n C3 H32 EPE sing 100 n n N4 C5 EPE sing 101 n n N4 C7 EPE sing 102 n n C5 C6 EPE sing 103 n n C5 H51 EPE sing 104 n n C5 H52 EPE sing 105 n n C6 H61 EPE sing 106 n n C6 H62 EPE sing 107 n n C7 C8 EPE sing 108 n n C7 H71 EPE sing 109 n n C7 H72 EPE sing 110 n n C8 O8 EPE sing 111 n n C8 H81 EPE sing 112 n n C8 H82 EPE sing 113 n n O8 HO8 EPE sing 114 n n C9 C10 EPE sing 115 n n C9 H91 EPE sing 116 n n C9 H92 EPE sing 117 n n C10 S EPE sing 118 n n C10 H101 EPE sing 119 n n C10 H102 EPE sing 120 n n S O1S EPE doub 121 n n S O2S EPE doub 122 n n S O3S EPE sing 123 n n O3S HOS3 EPE sing 124 n n # _atom_sites.entry_id 6EMG _atom_sites.fract_transf_matrix[1][1] 0.004667 _atom_sites.fract_transf_matrix[1][2] 0.002695 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005389 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 301 3 PO4 PO4 . D 2 PO4 A 1 302 4 PO4 PO4 . E 3 EDO A 1 303 1 EDO EDO . F 3 EDO A 1 304 2 EDO EDO . G 3 EDO A 1 305 3 EDO EDO . H 3 EDO A 1 306 4 EDO EDO . I 3 EDO A 1 307 5 EDO EDO . J 3 EDO A 1 308 6 EDO EDO . K 3 EDO A 1 309 7 EDO EDO . L 4 EPE A 1 310 1 EPE EPE . M 2 PO4 B 1 301 1 PO4 PO4 . N 2 PO4 B 1 302 2 PO4 PO4 . O 5 HOH A 1 401 188 HOH HOH . O 5 HOH A 2 402 117 HOH HOH . O 5 HOH A 3 403 189 HOH HOH . O 5 HOH A 4 404 185 HOH HOH . O 5 HOH A 5 405 81 HOH HOH . O 5 HOH A 6 406 58 HOH HOH . O 5 HOH A 7 407 126 HOH HOH . O 5 HOH A 8 408 100 HOH HOH . O 5 HOH A 9 409 94 HOH HOH . O 5 HOH A 10 410 73 HOH HOH . O 5 HOH A 11 411 36 HOH HOH . O 5 HOH A 12 412 64 HOH HOH . O 5 HOH A 13 413 40 HOH HOH . O 5 HOH A 14 414 98 HOH HOH . O 5 HOH A 15 415 2 HOH HOH . O 5 HOH A 16 416 107 HOH HOH . O 5 HOH A 17 417 171 HOH HOH . O 5 HOH A 18 418 95 HOH HOH . O 5 HOH A 19 419 65 HOH HOH . O 5 HOH A 20 420 97 HOH HOH . O 5 HOH A 21 421 184 HOH HOH . O 5 HOH A 22 422 56 HOH HOH . O 5 HOH A 23 423 164 HOH HOH . O 5 HOH A 24 424 162 HOH HOH . O 5 HOH A 25 425 89 HOH HOH . O 5 HOH A 26 426 49 HOH HOH . O 5 HOH A 27 427 3 HOH HOH . O 5 HOH A 28 428 15 HOH HOH . O 5 HOH A 29 429 115 HOH HOH . O 5 HOH A 30 430 106 HOH HOH . O 5 HOH A 31 431 63 HOH HOH . O 5 HOH A 32 432 102 HOH HOH . O 5 HOH A 33 433 110 HOH HOH . O 5 HOH A 34 434 103 HOH HOH . O 5 HOH A 35 435 121 HOH HOH . O 5 HOH A 36 436 62 HOH HOH . O 5 HOH A 37 437 109 HOH HOH . O 5 HOH A 38 438 30 HOH HOH . O 5 HOH A 39 439 124 HOH HOH . O 5 HOH A 40 440 113 HOH HOH . O 5 HOH A 41 441 186 HOH HOH . O 5 HOH A 42 442 19 HOH HOH . O 5 HOH A 43 443 46 HOH HOH . O 5 HOH A 44 444 101 HOH HOH . O 5 HOH A 45 445 82 HOH HOH . O 5 HOH A 46 446 160 HOH HOH . O 5 HOH A 47 447 161 HOH HOH . O 5 HOH A 48 448 1 HOH HOH . O 5 HOH A 49 449 80 HOH HOH . O 5 HOH A 50 450 104 HOH HOH . O 5 HOH A 51 451 91 HOH HOH . O 5 HOH A 52 452 66 HOH HOH . O 5 HOH A 53 453 127 HOH HOH . O 5 HOH A 54 454 182 HOH HOH . O 5 HOH A 55 455 4 HOH HOH . O 5 HOH A 56 456 45 HOH HOH . O 5 HOH A 57 457 75 HOH HOH . O 5 HOH A 58 458 41 HOH HOH . O 5 HOH A 59 459 85 HOH HOH . O 5 HOH A 60 460 54 HOH HOH . O 5 HOH A 61 461 84 HOH HOH . O 5 HOH A 62 462 67 HOH HOH . O 5 HOH A 63 463 112 HOH HOH . O 5 HOH A 64 464 50 HOH HOH . O 5 HOH A 65 465 187 HOH HOH . O 5 HOH A 66 466 21 HOH HOH . O 5 HOH A 67 467 79 HOH HOH . O 5 HOH A 68 468 32 HOH HOH . O 5 HOH A 69 469 9 HOH HOH . O 5 HOH A 70 470 48 HOH HOH . O 5 HOH A 71 471 7 HOH HOH . O 5 HOH A 72 472 25 HOH HOH . O 5 HOH A 73 473 156 HOH HOH . O 5 HOH A 74 474 108 HOH HOH . O 5 HOH A 75 475 111 HOH HOH . O 5 HOH A 76 476 114 HOH HOH . O 5 HOH A 77 477 105 HOH HOH . O 5 HOH A 78 478 86 HOH HOH . O 5 HOH A 79 479 20 HOH HOH . O 5 HOH A 80 480 26 HOH HOH . O 5 HOH A 81 481 155 HOH HOH . O 5 HOH A 82 482 168 HOH HOH . O 5 HOH A 83 483 179 HOH HOH . O 5 HOH A 84 484 163 HOH HOH . O 5 HOH A 85 485 43 HOH HOH . O 5 HOH A 86 486 123 HOH HOH . O 5 HOH A 87 487 76 HOH HOH . O 5 HOH A 88 488 22 HOH HOH . O 5 HOH A 89 489 28 HOH HOH . O 5 HOH A 90 490 35 HOH HOH . O 5 HOH A 91 491 93 HOH HOH . O 5 HOH A 92 492 83 HOH HOH . O 5 HOH A 93 493 17 HOH HOH . O 5 HOH A 94 494 172 HOH HOH . O 5 HOH A 95 495 14 HOH HOH . O 5 HOH A 96 496 174 HOH HOH . O 5 HOH A 97 497 60 HOH HOH . O 5 HOH A 98 498 61 HOH HOH . O 5 HOH A 99 499 173 HOH HOH . O 5 HOH A 100 500 72 HOH HOH . O 5 HOH A 101 501 170 HOH HOH . O 5 HOH A 102 502 88 HOH HOH . O 5 HOH A 103 503 96 HOH HOH . O 5 HOH A 104 504 53 HOH HOH . O 5 HOH A 105 505 151 HOH HOH . O 5 HOH A 106 506 29 HOH HOH . O 5 HOH A 107 507 166 HOH HOH . O 5 HOH A 108 508 59 HOH HOH . O 5 HOH A 109 509 27 HOH HOH . O 5 HOH A 110 510 71 HOH HOH . O 5 HOH A 111 511 152 HOH HOH . O 5 HOH A 112 512 154 HOH HOH . O 5 HOH A 113 513 159 HOH HOH . O 5 HOH A 114 514 178 HOH HOH . O 5 HOH A 115 515 176 HOH HOH . O 5 HOH A 116 516 116 HOH HOH . O 5 HOH A 117 517 47 HOH HOH . O 5 HOH A 118 518 165 HOH HOH . O 5 HOH A 119 519 167 HOH HOH . O 5 HOH A 120 520 87 HOH HOH . O 5 HOH A 121 521 149 HOH HOH . O 5 HOH A 122 522 181 HOH HOH . O 5 HOH A 123 523 150 HOH HOH . O 5 HOH A 124 524 118 HOH HOH . O 5 HOH A 125 525 52 HOH HOH . O 5 HOH A 126 526 128 HOH HOH . O 5 HOH A 127 527 68 HOH HOH . O 5 HOH A 128 528 42 HOH HOH . O 5 HOH A 129 529 153 HOH HOH . O 5 HOH A 130 530 120 HOH HOH . O 5 HOH A 131 531 122 HOH HOH . O 5 HOH A 132 532 70 HOH HOH . O 5 HOH A 133 533 157 HOH HOH . O 5 HOH A 134 534 158 HOH HOH . O 5 HOH A 135 535 175 HOH HOH . O 5 HOH A 136 536 55 HOH HOH . O 5 HOH A 137 537 125 HOH HOH . O 5 HOH A 138 538 169 HOH HOH . O 5 HOH A 139 539 177 HOH HOH . O 5 HOH A 140 540 44 HOH HOH . O 5 HOH A 141 541 51 HOH HOH . P 5 HOH B 1 401 74 HOH HOH . P 5 HOH B 2 402 39 HOH HOH . P 5 HOH B 3 403 92 HOH HOH . P 5 HOH B 4 404 78 HOH HOH . P 5 HOH B 5 405 24 HOH HOH . P 5 HOH B 6 406 135 HOH HOH . P 5 HOH B 7 407 33 HOH HOH . P 5 HOH B 8 408 38 HOH HOH . P 5 HOH B 9 409 37 HOH HOH . P 5 HOH B 10 410 31 HOH HOH . P 5 HOH B 11 411 77 HOH HOH . P 5 HOH B 12 412 69 HOH HOH . P 5 HOH B 13 413 137 HOH HOH . P 5 HOH B 14 414 23 HOH HOH . P 5 HOH B 15 415 139 HOH HOH . P 5 HOH B 16 416 13 HOH HOH . P 5 HOH B 17 417 5 HOH HOH . P 5 HOH B 18 418 142 HOH HOH . P 5 HOH B 19 419 138 HOH HOH . P 5 HOH B 20 420 16 HOH HOH . P 5 HOH B 21 421 6 HOH HOH . P 5 HOH B 22 422 10 HOH HOH . P 5 HOH B 23 423 140 HOH HOH . P 5 HOH B 24 424 143 HOH HOH . P 5 HOH B 25 425 8 HOH HOH . P 5 HOH B 26 426 148 HOH HOH . P 5 HOH B 27 427 18 HOH HOH . P 5 HOH B 28 428 134 HOH HOH . P 5 HOH B 29 429 145 HOH HOH . P 5 HOH B 30 430 34 HOH HOH . P 5 HOH B 31 431 99 HOH HOH . P 5 HOH B 32 432 180 HOH HOH . P 5 HOH B 33 433 132 HOH HOH . P 5 HOH B 34 434 136 HOH HOH . P 5 HOH B 35 435 146 HOH HOH . P 5 HOH B 36 436 131 HOH HOH . P 5 HOH B 37 437 183 HOH HOH . P 5 HOH B 38 438 133 HOH HOH . P 5 HOH B 39 439 12 HOH HOH . P 5 HOH B 40 440 11 HOH HOH . P 5 HOH B 41 441 141 HOH HOH . P 5 HOH B 42 442 90 HOH HOH . P 5 HOH B 43 443 147 HOH HOH . P 5 HOH B 44 444 130 HOH HOH . P 5 HOH B 45 445 144 HOH HOH . P 5 HOH B 46 446 129 HOH HOH . P 5 HOH B 47 447 119 HOH HOH . P 5 HOH B 48 448 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . L 4 76.615 79.671 29.413 0.56 66.98 ? N1 EPE 310 A 1 HETATM 2 C C2 EPE . . . L 4 76.492 78.352 30.051 0.56 74.22 ? C2 EPE 310 A 1 HETATM 3 C C3 EPE . . . L 4 75.737 78.398 31.377 0.56 65.35 ? C3 EPE 310 A 1 HETATM 4 N N4 EPE . . . L 4 76.301 79.388 32.263 0.56 64.16 ? N4 EPE 310 A 1 HETATM 5 C C5 EPE . . . L 4 76.648 80.659 31.669 0.56 64.81 ? C5 EPE 310 A 1 HETATM 6 C C6 EPE . . . L 4 77.358 80.534 30.329 0.56 67.29 ? C6 EPE 310 A 1 HETATM 7 C C7 EPE . . . L 4 75.974 79.363 33.676 0.56 63.02 ? C7 EPE 310 A 1 HETATM 8 C C8 EPE . . . L 4 76.926 78.51 34.506 0.56 84.75 ? C8 EPE 310 A 1 HETATM 9 O O8 EPE . . . L 4 76.591 78.667 35.868 0.56 91.33 ? O8 EPE 310 A 1 HETATM 10 C C9 EPE . . . L 4 77.431 79.507 28.196 0.56 78.78 ? C9 EPE 310 A 1 HETATM 11 C C10 EPE . . . L 4 77.155 80.636 27.206 0.56 81.69 ? C10 EPE 310 A 1 HETATM 12 S S EPE . . . L 4 77.881 80.366 25.569 0.56 102.89 ? S EPE 310 A 1 HETATM 13 O O1S EPE . . . L 4 77.255 79.199 24.956 0.56 89.61 ? O1S EPE 310 A 1 HETATM 14 O O2S EPE . . . L 4 77.618 81.533 24.726 0.56 96.05 ? O2S EPE 310 A 1 HETATM 15 O O3S EPE . . . L 4 79.32 80.145 25.686 0.56 60.62 ? O3S EPE 310 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #