data_6EMN
#
_model_server_result.job_id            wTseNl2ITX2BjfZpK0D1og 
_model_server_result.datetime_utc      '2024-10-28 02:32:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6emn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    6EMN 
#
_exptl.entry_id    6EMN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6EMN 
_cell.length_a            40.28 
_cell.length_b            55.2 
_cell.length_c            126.33 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6EMN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O TYR 44 A TYR 44 1_555 C MG MG . A MG 302 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
metalc ? metalc2 A OG SER 228 A SER 228 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc3 C MG MG . A MG 302 1_555 D O1 EDO . A EDO 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? 
metalc ? metalc4 C MG MG . A MG 302 1_555 F O HOH . A HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? 
metalc ? metalc5 C MG MG . A MG 302 1_555 F O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? 
metalc ? metalc6 C MG MG . A MG 302 1_555 F O HOH . A HOH 543 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 75 n n 
C1 C2 EDO sing 76 n n 
C1 H11 EDO sing 77 n n 
C1 H12 EDO sing 78 n n 
O1 HO1 EDO sing 79 n n 
C2 O2 EDO sing 80 n n 
C2 H21 EDO sing 81 n n 
C2 H22 EDO sing 82 n n 
O2 HO2 EDO sing 83 n n 
#
_atom_sites.entry_id                     6EMN 
_atom_sites.fract_transf_matrix[1][1]    0.024826 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018116 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007916 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 78T A 1 301 1 78T PST . 
C 3 MG A 1 302 1 MG MG . 
D 4 EDO A 1 303 1 EDO EDO . 
E 4 EDO A 1 304 2 EDO EDO . 
F 5 HOH A 1 401 131 HOH HOH . 
F 5 HOH A 2 402 135 HOH HOH . 
F 5 HOH A 3 403 201 HOH HOH . 
F 5 HOH A 4 404 193 HOH HOH . 
F 5 HOH A 5 405 103 HOH HOH . 
F 5 HOH A 6 406 20 HOH HOH . 
F 5 HOH A 7 407 60 HOH HOH . 
F 5 HOH A 8 408 10 HOH HOH . 
F 5 HOH A 9 409 115 HOH HOH . 
F 5 HOH A 10 410 59 HOH HOH . 
F 5 HOH A 11 411 24 HOH HOH . 
F 5 HOH A 12 412 9 HOH HOH . 
F 5 HOH A 13 413 62 HOH HOH . 
F 5 HOH A 14 414 96 HOH HOH . 
F 5 HOH A 15 415 26 HOH HOH . 
F 5 HOH A 16 416 69 HOH HOH . 
F 5 HOH A 17 417 107 HOH HOH . 
F 5 HOH A 18 418 7 HOH HOH . 
F 5 HOH A 19 419 63 HOH HOH . 
F 5 HOH A 20 420 40 HOH HOH . 
F 5 HOH A 21 421 3 HOH HOH . 
F 5 HOH A 22 422 175 HOH HOH . 
F 5 HOH A 23 423 21 HOH HOH . 
F 5 HOH A 24 424 125 HOH HOH . 
F 5 HOH A 25 425 13 HOH HOH . 
F 5 HOH A 26 426 36 HOH HOH . 
F 5 HOH A 27 427 182 HOH HOH . 
F 5 HOH A 28 428 109 HOH HOH . 
F 5 HOH A 29 429 51 HOH HOH . 
F 5 HOH A 30 430 197 HOH HOH . 
F 5 HOH A 31 431 138 HOH HOH . 
F 5 HOH A 32 432 12 HOH HOH . 
F 5 HOH A 33 433 88 HOH HOH . 
F 5 HOH A 34 434 82 HOH HOH . 
F 5 HOH A 35 435 134 HOH HOH . 
F 5 HOH A 36 436 80 HOH HOH . 
F 5 HOH A 37 437 81 HOH HOH . 
F 5 HOH A 38 438 140 HOH HOH . 
F 5 HOH A 39 439 223 HOH HOH . 
F 5 HOH A 40 440 79 HOH HOH . 
F 5 HOH A 41 441 98 HOH HOH . 
F 5 HOH A 42 442 75 HOH HOH . 
F 5 HOH A 43 443 162 HOH HOH . 
F 5 HOH A 44 444 28 HOH HOH . 
F 5 HOH A 45 445 168 HOH HOH . 
F 5 HOH A 46 446 66 HOH HOH . 
F 5 HOH A 47 447 30 HOH HOH . 
F 5 HOH A 48 448 46 HOH HOH . 
F 5 HOH A 49 449 147 HOH HOH . 
F 5 HOH A 50 450 47 HOH HOH . 
F 5 HOH A 51 451 37 HOH HOH . 
F 5 HOH A 52 452 150 HOH HOH . 
F 5 HOH A 53 453 99 HOH HOH . 
F 5 HOH A 54 454 68 HOH HOH . 
F 5 HOH A 55 455 86 HOH HOH . 
F 5 HOH A 56 456 25 HOH HOH . 
F 5 HOH A 57 457 226 HOH HOH . 
F 5 HOH A 58 458 104 HOH HOH . 
F 5 HOH A 59 459 67 HOH HOH . 
F 5 HOH A 60 460 27 HOH HOH . 
F 5 HOH A 61 461 186 HOH HOH . 
F 5 HOH A 62 462 160 HOH HOH . 
F 5 HOH A 63 463 123 HOH HOH . 
F 5 HOH A 64 464 94 HOH HOH . 
F 5 HOH A 65 465 130 HOH HOH . 
F 5 HOH A 66 466 93 HOH HOH . 
F 5 HOH A 67 467 129 HOH HOH . 
F 5 HOH A 68 468 133 HOH HOH . 
F 5 HOH A 69 469 124 HOH HOH . 
F 5 HOH A 70 470 23 HOH HOH . 
F 5 HOH A 71 471 158 HOH HOH . 
F 5 HOH A 72 472 194 HOH HOH . 
F 5 HOH A 73 473 42 HOH HOH . 
F 5 HOH A 74 474 52 HOH HOH . 
F 5 HOH A 75 475 156 HOH HOH . 
F 5 HOH A 76 476 143 HOH HOH . 
F 5 HOH A 77 477 222 HOH HOH . 
F 5 HOH A 78 478 49 HOH HOH . 
F 5 HOH A 79 479 34 HOH HOH . 
F 5 HOH A 80 480 234 HOH HOH . 
F 5 HOH A 81 481 89 HOH HOH . 
F 5 HOH A 82 482 171 HOH HOH . 
F 5 HOH A 83 483 114 HOH HOH . 
F 5 HOH A 84 484 95 HOH HOH . 
F 5 HOH A 85 485 71 HOH HOH . 
F 5 HOH A 86 486 72 HOH HOH . 
F 5 HOH A 87 487 228 HOH HOH . 
F 5 HOH A 88 488 31 HOH HOH . 
F 5 HOH A 89 489 183 HOH HOH . 
F 5 HOH A 90 490 132 HOH HOH . 
F 5 HOH A 91 491 77 HOH HOH . 
F 5 HOH A 92 492 173 HOH HOH . 
F 5 HOH A 93 493 149 HOH HOH . 
F 5 HOH A 94 494 153 HOH HOH . 
F 5 HOH A 95 495 142 HOH HOH . 
F 5 HOH A 96 496 122 HOH HOH . 
F 5 HOH A 97 497 57 HOH HOH . 
F 5 HOH A 98 498 198 HOH HOH . 
F 5 HOH A 99 499 189 HOH HOH . 
F 5 HOH A 100 500 90 HOH HOH . 
F 5 HOH A 101 501 111 HOH HOH . 
F 5 HOH A 102 502 33 HOH HOH . 
F 5 HOH A 103 503 108 HOH HOH . 
F 5 HOH A 104 504 92 HOH HOH . 
F 5 HOH A 105 505 32 HOH HOH . 
F 5 HOH A 106 506 176 HOH HOH . 
F 5 HOH A 107 507 11 HOH HOH . 
F 5 HOH A 108 508 200 HOH HOH . 
F 5 HOH A 109 509 74 HOH HOH . 
F 5 HOH A 110 510 83 HOH HOH . 
F 5 HOH A 111 511 4 HOH HOH . 
F 5 HOH A 112 512 87 HOH HOH . 
F 5 HOH A 113 513 155 HOH HOH . 
F 5 HOH A 114 514 22 HOH HOH . 
F 5 HOH A 115 515 119 HOH HOH . 
F 5 HOH A 116 516 121 HOH HOH . 
F 5 HOH A 117 517 136 HOH HOH . 
F 5 HOH A 118 518 235 HOH HOH . 
F 5 HOH A 119 519 163 HOH HOH . 
F 5 HOH A 120 520 5 HOH HOH . 
F 5 HOH A 121 521 64 HOH HOH . 
F 5 HOH A 122 522 106 HOH HOH . 
F 5 HOH A 123 523 39 HOH HOH . 
F 5 HOH A 124 524 43 HOH HOH . 
F 5 HOH A 125 525 56 HOH HOH . 
F 5 HOH A 126 526 113 HOH HOH . 
F 5 HOH A 127 527 41 HOH HOH . 
F 5 HOH A 128 528 70 HOH HOH . 
F 5 HOH A 129 529 101 HOH HOH . 
F 5 HOH A 130 530 76 HOH HOH . 
F 5 HOH A 131 531 53 HOH HOH . 
F 5 HOH A 132 532 196 HOH HOH . 
F 5 HOH A 133 533 29 HOH HOH . 
F 5 HOH A 134 534 61 HOH HOH . 
F 5 HOH A 135 535 35 HOH HOH . 
F 5 HOH A 136 536 187 HOH HOH . 
F 5 HOH A 137 537 188 HOH HOH . 
F 5 HOH A 138 538 6 HOH HOH . 
F 5 HOH A 139 539 15 HOH HOH . 
F 5 HOH A 140 540 199 HOH HOH . 
F 5 HOH A 141 541 203 HOH HOH . 
F 5 HOH A 142 542 17 HOH HOH . 
F 5 HOH A 143 543 14 HOH HOH . 
F 5 HOH A 144 544 8 HOH HOH . 
F 5 HOH A 145 545 116 HOH HOH . 
F 5 HOH A 146 546 128 HOH HOH . 
F 5 HOH A 147 547 159 HOH HOH . 
F 5 HOH A 148 548 38 HOH HOH . 
F 5 HOH A 149 549 112 HOH HOH . 
F 5 HOH A 150 550 65 HOH HOH . 
F 5 HOH A 151 551 16 HOH HOH . 
F 5 HOH A 152 552 239 HOH HOH . 
F 5 HOH A 153 553 73 HOH HOH . 
F 5 HOH A 154 554 50 HOH HOH . 
F 5 HOH A 155 555 85 HOH HOH . 
F 5 HOH A 156 556 181 HOH HOH . 
F 5 HOH A 157 557 18 HOH HOH . 
F 5 HOH A 158 558 236 HOH HOH . 
F 5 HOH A 159 559 144 HOH HOH . 
F 5 HOH A 160 560 55 HOH HOH . 
F 5 HOH A 161 561 172 HOH HOH . 
F 5 HOH A 162 562 237 HOH HOH . 
F 5 HOH A 163 563 118 HOH HOH . 
F 5 HOH A 164 564 169 HOH HOH . 
F 5 HOH A 165 565 148 HOH HOH . 
F 5 HOH A 166 566 44 HOH HOH . 
F 5 HOH A 167 567 152 HOH HOH . 
F 5 HOH A 168 568 19 HOH HOH . 
F 5 HOH A 169 569 110 HOH HOH . 
F 5 HOH A 170 570 45 HOH HOH . 
F 5 HOH A 171 571 78 HOH HOH . 
F 5 HOH A 172 572 117 HOH HOH . 
F 5 HOH A 173 573 180 HOH HOH . 
F 5 HOH A 174 574 219 HOH HOH . 
F 5 HOH A 175 575 127 HOH HOH . 
F 5 HOH A 176 576 165 HOH HOH . 
F 5 HOH A 177 577 207 HOH HOH . 
F 5 HOH A 178 578 2 HOH HOH . 
F 5 HOH A 179 579 238 HOH HOH . 
F 5 HOH A 180 580 231 HOH HOH . 
F 5 HOH A 181 581 97 HOH HOH . 
F 5 HOH A 182 582 212 HOH HOH . 
F 5 HOH A 183 583 185 HOH HOH . 
F 5 HOH A 184 584 58 HOH HOH . 
F 5 HOH A 185 585 227 HOH HOH . 
F 5 HOH A 186 586 151 HOH HOH . 
F 5 HOH A 187 587 126 HOH HOH . 
F 5 HOH A 188 588 215 HOH HOH . 
F 5 HOH A 189 589 48 HOH HOH . 
F 5 HOH A 190 590 100 HOH HOH . 
F 5 HOH A 191 591 167 HOH HOH . 
F 5 HOH A 192 592 191 HOH HOH . 
F 5 HOH A 193 593 166 HOH HOH . 
F 5 HOH A 194 594 139 HOH HOH . 
F 5 HOH A 195 595 102 HOH HOH . 
F 5 HOH A 196 596 221 HOH HOH . 
F 5 HOH A 197 597 157 HOH HOH . 
F 5 HOH A 198 598 184 HOH HOH . 
F 5 HOH A 199 599 205 HOH HOH . 
F 5 HOH A 200 600 204 HOH HOH . 
F 5 HOH A 201 601 230 HOH HOH . 
F 5 HOH A 202 602 170 HOH HOH . 
F 5 HOH A 203 603 213 HOH HOH . 
F 5 HOH A 204 604 54 HOH HOH . 
F 5 HOH A 205 605 229 HOH HOH . 
F 5 HOH A 206 606 91 HOH HOH . 
F 5 HOH A 207 607 178 HOH HOH . 
F 5 HOH A 208 608 209 HOH HOH . 
F 5 HOH A 209 609 84 HOH HOH . 
F 5 HOH A 210 610 120 HOH HOH . 
F 5 HOH A 211 611 218 HOH HOH . 
F 5 HOH A 212 612 208 HOH HOH . 
F 5 HOH A 213 613 137 HOH HOH . 
F 5 HOH A 214 614 164 HOH HOH . 
F 5 HOH A 215 615 174 HOH HOH . 
F 5 HOH A 216 616 145 HOH HOH . 
F 5 HOH A 217 617 177 HOH HOH . 
F 5 HOH A 218 618 154 HOH HOH . 
F 5 HOH A 219 619 233 HOH HOH . 
F 5 HOH A 220 620 206 HOH HOH . 
F 5 HOH A 221 621 217 HOH HOH . 
F 5 HOH A 222 622 240 HOH HOH . 
F 5 HOH A 223 623 105 HOH HOH . 
F 5 HOH A 224 624 141 HOH HOH . 
F 5 HOH A 225 625 216 HOH HOH . 
F 5 HOH A 226 626 202 HOH HOH . 
F 5 HOH A 227 627 192 HOH HOH . 
F 5 HOH A 228 628 232 HOH HOH . 
F 5 HOH A 229 629 210 HOH HOH . 
F 5 HOH A 230 630 190 HOH HOH . 
F 5 HOH A 231 631 161 HOH HOH . 
F 5 HOH A 232 632 179 HOH HOH . 
F 5 HOH A 233 633 225 HOH HOH . 
F 5 HOH A 234 634 224 HOH HOH . 
F 5 HOH A 235 635 214 HOH HOH . 
F 5 HOH A 236 636 211 HOH HOH . 
F 5 HOH A 237 637 220 HOH HOH . 
F 5 HOH A 238 638 195 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 -20.176 -11.036 1.568 1 19.27 ? C1 EDO 303 A 1 
HETATM 2 O O1 EDO . . . D 4 -20.405 -10.943 2.987 1 20.27 ? O1 EDO 303 A 1 
HETATM 3 C C2 EDO . . . D 4 -19.516 -12.377 1.21 1 16.75 ? C2 EDO 303 A 1 
HETATM 4 O O2 EDO . . . D 4 -18.284 -12.512 1.905 1 17.52 ? O2 EDO 303 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#