data_6EO0 # _model_server_result.job_id rfGZX8xojwFu-GEv6Uv9EA _model_server_result.datetime_utc '2024-11-02 06:19:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eo0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":302}' # _entry.id 6EO0 # _exptl.entry_id 6EO0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.24 _cell.angle_gamma 90 _cell.entry_id 6EO0 _cell.length_a 64.93 _cell.length_b 113.59 _cell.length_c 72.31 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EO0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,R 1 1 B,I,J,K,S 2 1 C,L,M,N,T 3 1 D,O,P,Q,U 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 J N N ? 3 M N N ? 3 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 141 A CYS 162 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc2 A SG CYS 144 A CYS 165 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc3 A SG CYS 182 A CYS 203 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc4 A SG CYS 187 A CYS 208 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc5 B SG CYS 141 B CYS 162 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc6 B SG CYS 144 B CYS 165 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc7 B SG CYS 182 B CYS 203 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc8 B SG CYS 187 B CYS 208 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc9 C SG CYS 141 C CYS 162 1_555 L ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc10 C SG CYS 144 C CYS 165 1_555 L ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc11 C SG CYS 182 C CYS 203 1_555 L ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc12 C SG CYS 187 C CYS 208 1_555 L ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc13 D SG CYS 141 D CYS 162 1_555 O ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc14 D SG CYS 144 D CYS 165 1_555 O ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc15 D SG CYS 182 D CYS 203 1_555 O ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc16 D SG CYS 187 D CYS 208 1_555 O ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 382 n n C1 C2 EDO sing 383 n n C1 H11 EDO sing 384 n n C1 H12 EDO sing 385 n n O1 HO1 EDO sing 386 n n C2 O2 EDO sing 387 n n C2 H21 EDO sing 388 n n C2 H22 EDO sing 389 n n O2 HO2 EDO sing 390 n n # _atom_sites.entry_id 6EO0 _atom_sites.fract_transf_matrix[1][1] 0.015401 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003622 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008804 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014207 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 301 2 ZN ZN . F 3 EDO A 1 302 3 EDO EDO . G 4 BV8 A 1 303 1 BV8 5SB . H 5 BVT A 1 304 4 BVT DRG . I 2 ZN B 1 301 3 ZN ZN . J 3 EDO B 1 302 4 EDO EDO . K 5 BVT B 1 303 2 BVT DRG . L 2 ZN C 1 301 1 ZN ZN . M 3 EDO C 1 302 5 EDO EDO . N 5 BVT C 1 303 3 BVT DRG . O 2 ZN D 1 301 4 ZN ZN . P 3 EDO D 1 302 1 EDO EDO . Q 5 BVT D 1 303 1 BVT DRG . R 6 HOH A 1 401 63 HOH HOH . R 6 HOH A 2 402 26 HOH HOH . R 6 HOH A 3 403 136 HOH HOH . R 6 HOH A 4 404 161 HOH HOH . R 6 HOH A 5 405 25 HOH HOH . R 6 HOH A 6 406 71 HOH HOH . R 6 HOH A 7 407 12 HOH HOH . R 6 HOH A 8 408 159 HOH HOH . R 6 HOH A 9 409 171 HOH HOH . R 6 HOH A 10 410 176 HOH HOH . R 6 HOH A 11 411 16 HOH HOH . R 6 HOH A 12 412 14 HOH HOH . R 6 HOH A 13 413 164 HOH HOH . R 6 HOH A 14 414 79 HOH HOH . R 6 HOH A 15 415 93 HOH HOH . R 6 HOH A 16 416 100 HOH HOH . R 6 HOH A 17 417 177 HOH HOH . R 6 HOH A 18 418 157 HOH HOH . R 6 HOH A 19 419 83 HOH HOH . R 6 HOH A 20 420 38 HOH HOH . R 6 HOH A 21 421 56 HOH HOH . R 6 HOH A 22 422 57 HOH HOH . R 6 HOH A 23 423 91 HOH HOH . R 6 HOH A 24 424 156 HOH HOH . R 6 HOH A 25 425 92 HOH HOH . R 6 HOH A 26 426 97 HOH HOH . R 6 HOH A 27 427 155 HOH HOH . R 6 HOH A 28 428 147 HOH HOH . R 6 HOH A 29 429 82 HOH HOH . R 6 HOH A 30 430 39 HOH HOH . R 6 HOH A 31 431 59 HOH HOH . R 6 HOH A 32 432 182 HOH HOH . R 6 HOH A 33 433 58 HOH HOH . R 6 HOH A 34 434 33 HOH HOH . R 6 HOH A 35 435 94 HOH HOH . R 6 HOH A 36 436 90 HOH HOH . S 6 HOH B 1 401 111 HOH HOH . S 6 HOH B 2 402 32 HOH HOH . S 6 HOH B 3 403 3 HOH HOH . S 6 HOH B 4 404 104 HOH HOH . S 6 HOH B 5 405 112 HOH HOH . S 6 HOH B 6 406 115 HOH HOH . S 6 HOH B 7 407 21 HOH HOH . S 6 HOH B 8 408 11 HOH HOH . S 6 HOH B 9 409 89 HOH HOH . S 6 HOH B 10 410 114 HOH HOH . S 6 HOH B 11 411 60 HOH HOH . S 6 HOH B 12 412 28 HOH HOH . S 6 HOH B 13 413 118 HOH HOH . S 6 HOH B 14 414 116 HOH HOH . S 6 HOH B 15 415 109 HOH HOH . S 6 HOH B 16 416 49 HOH HOH . S 6 HOH B 17 417 163 HOH HOH . S 6 HOH B 18 418 108 HOH HOH . S 6 HOH B 19 419 30 HOH HOH . S 6 HOH B 20 420 110 HOH HOH . S 6 HOH B 21 421 86 HOH HOH . S 6 HOH B 22 422 107 HOH HOH . S 6 HOH B 23 423 45 HOH HOH . S 6 HOH B 24 424 8 HOH HOH . S 6 HOH B 25 425 101 HOH HOH . S 6 HOH B 26 426 179 HOH HOH . S 6 HOH B 27 427 183 HOH HOH . S 6 HOH B 28 428 175 HOH HOH . S 6 HOH B 29 429 36 HOH HOH . S 6 HOH B 30 430 102 HOH HOH . S 6 HOH B 31 431 17 HOH HOH . S 6 HOH B 32 432 113 HOH HOH . S 6 HOH B 33 433 119 HOH HOH . S 6 HOH B 34 434 81 HOH HOH . S 6 HOH B 35 435 117 HOH HOH . S 6 HOH B 36 436 181 HOH HOH . S 6 HOH B 37 437 178 HOH HOH . S 6 HOH B 38 438 180 HOH HOH . S 6 HOH B 39 439 105 HOH HOH . S 6 HOH B 40 440 99 HOH HOH . T 6 HOH C 1 401 170 HOH HOH . T 6 HOH C 2 402 125 HOH HOH . T 6 HOH C 3 403 133 HOH HOH . T 6 HOH C 4 404 166 HOH HOH . T 6 HOH C 5 405 22 HOH HOH . T 6 HOH C 6 406 191 HOH HOH . T 6 HOH C 7 407 4 HOH HOH . T 6 HOH C 8 408 154 HOH HOH . T 6 HOH C 9 409 43 HOH HOH . T 6 HOH C 10 410 134 HOH HOH . T 6 HOH C 11 411 124 HOH HOH . T 6 HOH C 12 412 128 HOH HOH . T 6 HOH C 13 413 9 HOH HOH . T 6 HOH C 14 414 127 HOH HOH . T 6 HOH C 15 415 174 HOH HOH . T 6 HOH C 16 416 132 HOH HOH . T 6 HOH C 17 417 13 HOH HOH . T 6 HOH C 18 418 126 HOH HOH . T 6 HOH C 19 419 52 HOH HOH . T 6 HOH C 20 420 35 HOH HOH . T 6 HOH C 21 421 137 HOH HOH . T 6 HOH C 22 422 189 HOH HOH . T 6 HOH C 23 423 78 HOH HOH . T 6 HOH C 24 424 131 HOH HOH . T 6 HOH C 25 425 96 HOH HOH . T 6 HOH C 26 426 122 HOH HOH . T 6 HOH C 27 427 70 HOH HOH . T 6 HOH C 28 428 162 HOH HOH . T 6 HOH C 29 429 74 HOH HOH . T 6 HOH C 30 430 69 HOH HOH . T 6 HOH C 31 431 64 HOH HOH . T 6 HOH C 32 432 73 HOH HOH . T 6 HOH C 33 433 121 HOH HOH . T 6 HOH C 34 434 95 HOH HOH . T 6 HOH C 35 435 135 HOH HOH . T 6 HOH C 36 436 76 HOH HOH . T 6 HOH C 37 437 77 HOH HOH . T 6 HOH C 38 438 129 HOH HOH . T 6 HOH C 39 439 40 HOH HOH . T 6 HOH C 40 440 98 HOH HOH . T 6 HOH C 41 441 195 HOH HOH . T 6 HOH C 42 442 187 HOH HOH . T 6 HOH C 43 443 152 HOH HOH . T 6 HOH C 44 444 151 HOH HOH . T 6 HOH C 45 445 193 HOH HOH . T 6 HOH C 46 446 188 HOH HOH . T 6 HOH C 47 447 44 HOH HOH . T 6 HOH C 48 448 120 HOH HOH . T 6 HOH C 49 449 190 HOH HOH . T 6 HOH C 50 450 158 HOH HOH . U 6 HOH D 1 401 18 HOH HOH . U 6 HOH D 2 402 6 HOH HOH . U 6 HOH D 3 403 10 HOH HOH . U 6 HOH D 4 404 55 HOH HOH . U 6 HOH D 5 405 194 HOH HOH . U 6 HOH D 6 406 23 HOH HOH . U 6 HOH D 7 407 160 HOH HOH . U 6 HOH D 8 408 19 HOH HOH . U 6 HOH D 9 409 31 HOH HOH . U 6 HOH D 10 410 140 HOH HOH . U 6 HOH D 11 411 168 HOH HOH . U 6 HOH D 12 412 173 HOH HOH . U 6 HOH D 13 413 88 HOH HOH . U 6 HOH D 14 414 53 HOH HOH . U 6 HOH D 15 415 2 HOH HOH . U 6 HOH D 16 416 150 HOH HOH . U 6 HOH D 17 417 42 HOH HOH . U 6 HOH D 18 418 141 HOH HOH . U 6 HOH D 19 419 27 HOH HOH . U 6 HOH D 20 420 15 HOH HOH . U 6 HOH D 21 421 29 HOH HOH . U 6 HOH D 22 422 144 HOH HOH . U 6 HOH D 23 423 80 HOH HOH . U 6 HOH D 24 424 145 HOH HOH . U 6 HOH D 25 425 172 HOH HOH . U 6 HOH D 26 426 65 HOH HOH . U 6 HOH D 27 427 142 HOH HOH . U 6 HOH D 28 428 146 HOH HOH . U 6 HOH D 29 429 37 HOH HOH . U 6 HOH D 30 430 48 HOH HOH . U 6 HOH D 31 431 192 HOH HOH . U 6 HOH D 32 432 46 HOH HOH . U 6 HOH D 33 433 139 HOH HOH . U 6 HOH D 34 434 130 HOH HOH . U 6 HOH D 35 435 61 HOH HOH . U 6 HOH D 36 436 72 HOH HOH . U 6 HOH D 37 437 87 HOH HOH . U 6 HOH D 38 438 34 HOH HOH . U 6 HOH D 39 439 47 HOH HOH . U 6 HOH D 40 440 66 HOH HOH . U 6 HOH D 41 441 106 HOH HOH . U 6 HOH D 42 442 85 HOH HOH . U 6 HOH D 43 443 143 HOH HOH . U 6 HOH D 44 444 51 HOH HOH . U 6 HOH D 45 445 186 HOH HOH . U 6 HOH D 46 446 41 HOH HOH . U 6 HOH D 47 447 138 HOH HOH . U 6 HOH D 48 448 75 HOH HOH . U 6 HOH D 49 449 68 HOH HOH . U 6 HOH D 50 450 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . J 3 28.819 17.966 63.928 1 76.77 ? C1 EDO 302 B 1 HETATM 2 O O1 EDO . . . J 3 27.489 17.434 63.985 1 71.25 ? O1 EDO 302 B 1 HETATM 3 C C2 EDO . . . J 3 29.128 18.91 65.094 1 77.72 ? C2 EDO 302 B 1 HETATM 4 O O2 EDO . . . J 3 29.639 20.18 64.644 1 74.77 ? O2 EDO 302 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #