data_6EP1 # _model_server_result.job_id ozpSx664wz4QfZ-bWFSSXA _model_server_result.datetime_utc '2024-10-18 17:17:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ep1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6EP1 # _exptl.entry_id 6EP1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 413.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-(4-nitrophenylazo)-3-iodosalicylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EP1 _cell.length_a 42.9 _cell.length_b 85.27 _cell.length_c 64.59 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EP1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 42.9 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C13 H8 I N3 O5' _chem_comp.formula_weight 413.124 _chem_comp.id BQB _chem_comp.mon_nstd_flag . _chem_comp.name '5-(4-nitrophenylazo)-3-iodosalicylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAP CAL BQB sing 70 n n OAS CAQ BQB doub 71 n n CAQ OAR BQB sing 72 n n CAQ CAM BQB sing 73 n n IAO CAK BQB sing 74 n n CAL CAM BQB doub 75 n y CAL CAK BQB sing 76 n y CAM CAN BQB sing 77 n y CAK CAJ BQB doub 78 n y CAN CAI BQB doub 79 n y CAJ CAI BQB sing 80 n y CAI NAH BQB sing 81 n n NAH NAG BQB doub 82 n n NAG CAF BQB sing 83 n n CAF CAE BQB doub 84 n y CAF CAA BQB sing 85 n y CAE CAD BQB sing 86 n y CAA CAB BQB doub 87 n y CAD CAC BQB doub 88 n y CAB CAC BQB sing 89 n y CAC NAT BQB sing 90 n n NAT OAU BQB doub 91 n n NAT OAV BQB sing 92 n n CAA H1 BQB sing 93 n n CAB H2 BQB sing 94 n n CAD H3 BQB sing 95 n n CAE H4 BQB sing 96 n n CAJ H5 BQB sing 97 n n CAN H6 BQB sing 98 n n OAP H9 BQB sing 99 n n OAR H10 BQB sing 100 n n # _atom_sites.entry_id 6EP1 _atom_sites.fract_transf_matrix[1][1] 0.02331 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015482 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BQB A 1 201 1 BQB DRG . D 2 BQB B 1 201 2 BQB DRG . E 3 HOH A 1 301 220 HOH HOH . E 3 HOH A 2 302 137 HOH HOH . E 3 HOH A 3 303 256 HOH HOH . E 3 HOH A 4 304 222 HOH HOH . E 3 HOH A 5 305 47 HOH HOH . E 3 HOH A 6 306 83 HOH HOH . E 3 HOH A 7 307 50 HOH HOH . E 3 HOH A 8 308 35 HOH HOH . E 3 HOH A 9 309 88 HOH HOH . E 3 HOH A 10 310 86 HOH HOH . E 3 HOH A 11 311 44 HOH HOH . E 3 HOH A 12 312 153 HOH HOH . E 3 HOH A 13 313 198 HOH HOH . E 3 HOH A 14 314 13 HOH HOH . E 3 HOH A 15 315 281 HOH HOH . E 3 HOH A 16 316 7 HOH HOH . E 3 HOH A 17 317 250 HOH HOH . E 3 HOH A 18 318 55 HOH HOH . E 3 HOH A 19 319 25 HOH HOH . E 3 HOH A 20 320 29 HOH HOH . E 3 HOH A 21 321 203 HOH HOH . E 3 HOH A 22 322 20 HOH HOH . E 3 HOH A 23 323 4 HOH HOH . E 3 HOH A 24 324 96 HOH HOH . E 3 HOH A 25 325 57 HOH HOH . E 3 HOH A 26 326 51 HOH HOH . E 3 HOH A 27 327 5 HOH HOH . E 3 HOH A 28 328 195 HOH HOH . E 3 HOH A 29 329 46 HOH HOH . E 3 HOH A 30 330 15 HOH HOH . E 3 HOH A 31 331 69 HOH HOH . E 3 HOH A 32 332 24 HOH HOH . E 3 HOH A 33 333 258 HOH HOH . E 3 HOH A 34 334 115 HOH HOH . E 3 HOH A 35 335 1 HOH HOH . E 3 HOH A 36 336 43 HOH HOH . E 3 HOH A 37 337 31 HOH HOH . E 3 HOH A 38 338 16 HOH HOH . E 3 HOH A 39 339 65 HOH HOH . E 3 HOH A 40 340 202 HOH HOH . E 3 HOH A 41 341 18 HOH HOH . E 3 HOH A 42 342 6 HOH HOH . E 3 HOH A 43 343 199 HOH HOH . E 3 HOH A 44 344 23 HOH HOH . E 3 HOH A 45 345 19 HOH HOH . E 3 HOH A 46 346 58 HOH HOH . E 3 HOH A 47 347 213 HOH HOH . E 3 HOH A 48 348 221 HOH HOH . E 3 HOH A 49 349 103 HOH HOH . E 3 HOH A 50 350 146 HOH HOH . E 3 HOH A 51 351 276 HOH HOH . E 3 HOH A 52 352 89 HOH HOH . E 3 HOH A 53 353 62 HOH HOH . E 3 HOH A 54 354 42 HOH HOH . E 3 HOH A 55 355 59 HOH HOH . E 3 HOH A 56 356 219 HOH HOH . E 3 HOH A 57 357 259 HOH HOH . E 3 HOH A 58 358 189 HOH HOH . E 3 HOH A 59 359 90 HOH HOH . E 3 HOH A 60 360 141 HOH HOH . E 3 HOH A 61 361 154 HOH HOH . E 3 HOH A 62 362 131 HOH HOH . E 3 HOH A 63 363 41 HOH HOH . E 3 HOH A 64 364 212 HOH HOH . E 3 HOH A 65 365 78 HOH HOH . E 3 HOH A 66 366 124 HOH HOH . E 3 HOH A 67 367 132 HOH HOH . E 3 HOH A 68 368 186 HOH HOH . E 3 HOH A 69 369 142 HOH HOH . E 3 HOH A 70 370 98 HOH HOH . E 3 HOH A 71 371 197 HOH HOH . E 3 HOH A 72 372 99 HOH HOH . E 3 HOH A 73 373 204 HOH HOH . E 3 HOH A 74 374 49 HOH HOH . E 3 HOH A 75 375 282 HOH HOH . E 3 HOH A 76 376 145 HOH HOH . E 3 HOH A 77 377 240 HOH HOH . E 3 HOH A 78 378 149 HOH HOH . E 3 HOH A 79 379 246 HOH HOH . E 3 HOH A 80 380 79 HOH HOH . E 3 HOH A 81 381 75 HOH HOH . F 3 HOH B 1 301 39 HOH HOH . F 3 HOH B 2 302 84 HOH HOH . F 3 HOH B 3 303 123 HOH HOH . F 3 HOH B 4 304 92 HOH HOH . F 3 HOH B 5 305 38 HOH HOH . F 3 HOH B 6 306 207 HOH HOH . F 3 HOH B 7 307 296 HOH HOH . F 3 HOH B 8 308 9 HOH HOH . F 3 HOH B 9 309 106 HOH HOH . F 3 HOH B 10 310 144 HOH HOH . F 3 HOH B 11 311 168 HOH HOH . F 3 HOH B 12 312 10 HOH HOH . F 3 HOH B 13 313 33 HOH HOH . F 3 HOH B 14 314 3 HOH HOH . F 3 HOH B 15 315 185 HOH HOH . F 3 HOH B 16 316 8 HOH HOH . F 3 HOH B 17 317 80 HOH HOH . F 3 HOH B 18 318 26 HOH HOH . F 3 HOH B 19 319 17 HOH HOH . F 3 HOH B 20 320 104 HOH HOH . F 3 HOH B 21 321 52 HOH HOH . F 3 HOH B 22 322 74 HOH HOH . F 3 HOH B 23 323 72 HOH HOH . F 3 HOH B 24 324 63 HOH HOH . F 3 HOH B 25 325 30 HOH HOH . F 3 HOH B 26 326 54 HOH HOH . F 3 HOH B 27 327 110 HOH HOH . F 3 HOH B 28 328 21 HOH HOH . F 3 HOH B 29 329 37 HOH HOH . F 3 HOH B 30 330 2 HOH HOH . F 3 HOH B 31 331 36 HOH HOH . F 3 HOH B 32 332 82 HOH HOH . F 3 HOH B 33 333 11 HOH HOH . F 3 HOH B 34 334 95 HOH HOH . F 3 HOH B 35 335 160 HOH HOH . F 3 HOH B 36 336 205 HOH HOH . F 3 HOH B 37 337 66 HOH HOH . F 3 HOH B 38 338 27 HOH HOH . F 3 HOH B 39 339 48 HOH HOH . F 3 HOH B 40 340 76 HOH HOH . F 3 HOH B 41 341 85 HOH HOH . F 3 HOH B 42 342 81 HOH HOH . F 3 HOH B 43 343 126 HOH HOH . F 3 HOH B 44 344 193 HOH HOH . F 3 HOH B 45 345 87 HOH HOH . F 3 HOH B 46 346 112 HOH HOH . F 3 HOH B 47 347 138 HOH HOH . F 3 HOH B 48 348 40 HOH HOH . F 3 HOH B 49 349 71 HOH HOH . F 3 HOH B 50 350 226 HOH HOH . F 3 HOH B 51 351 140 HOH HOH . F 3 HOH B 52 352 270 HOH HOH . F 3 HOH B 53 353 60 HOH HOH . F 3 HOH B 54 354 139 HOH HOH . F 3 HOH B 55 355 105 HOH HOH . F 3 HOH B 56 356 190 HOH HOH . F 3 HOH B 57 357 109 HOH HOH . F 3 HOH B 58 358 73 HOH HOH . F 3 HOH B 59 359 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA BQB . . . C 2 22.183 1.997 74.45 0.35 29.18 ? CAA BQB 201 A 1 HETATM 2 C CAB BQB . . . C 2 22.12 1.693 75.786 0.35 29.82 ? CAB BQB 201 A 1 HETATM 3 C CAC BQB . . . C 2 21.719 0.364 76.205 0.35 30.26 ? CAC BQB 201 A 1 HETATM 4 C CAD BQB . . . C 2 21.389 -0.634 75.236 0.35 29.73 ? CAD BQB 201 A 1 HETATM 5 C CAE BQB . . . C 2 21.456 -0.332 73.896 0.35 28.87 ? CAE BQB 201 A 1 HETATM 6 C CAF BQB . . . C 2 21.846 0.968 73.475 0.35 29.39 ? CAF BQB 201 A 1 HETATM 7 C CAI BQB . . . C 2 21.594 0.021 69.89 0.35 29.19 ? CAI BQB 201 A 1 HETATM 8 C CAJ BQB . . . C 2 20.63 -0.72 69.275 0.35 28.03 ? CAJ BQB 201 A 1 HETATM 9 C CAK BQB . . . C 2 20.552 -0.753 67.863 0.35 27.22 ? CAK BQB 201 A 1 HETATM 10 C CAL BQB . . . C 2 21.448 -0.044 67.103 0.35 28.84 ? CAL BQB 201 A 1 HETATM 11 C CAM BQB . . . C 2 22.416 0.697 67.716 0.35 29.31 ? CAM BQB 201 A 1 HETATM 12 C CAN BQB . . . C 2 22.496 0.73 69.144 0.35 29.29 ? CAN BQB 201 A 1 HETATM 13 C CAQ BQB . . . C 2 23.428 1.495 66.87 0.35 30.83 ? CAQ BQB 201 A 1 HETATM 14 I IAO BQB . . . C 2 19.071 -1.883 66.968 0.35 25.88 ? IAO BQB 201 A 1 HETATM 15 N NAG BQB . . . C 2 21.892 1.197 72.098 0.35 29.95 ? NAG BQB 201 A 1 HETATM 16 N NAH BQB . . . C 2 21.633 0.013 71.286 0.35 29.33 ? NAH BQB 201 A 1 HETATM 17 N NAT BQB . . . C 2 21.632 0.004 77.636 0.35 30.42 ? NAT BQB 201 A 1 HETATM 18 O OAP BQB . . . C 2 21.353 -0.087 65.62 0.35 30.16 ? OAP BQB 201 A 1 HETATM 19 O OAR BQB . . . C 2 24.539 1.996 67.446 0.35 30.55 ? OAR BQB 201 A 1 HETATM 20 O OAS BQB . . . C 2 23.219 1.679 65.646 0.35 31.74 ? OAS BQB 201 A 1 HETATM 21 O OAU BQB . . . C 2 20.415 -0.539 78.126 0.35 28.86 ? OAU BQB 201 A 1 HETATM 22 O OAV BQB . . . C 2 22.721 0.185 78.476 0.35 30.85 ? OAV BQB 201 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #