data_6ESD
#
_model_server_result.job_id            pfu9-1Wa9WpxPH3DqI-c7w 
_model_server_result.datetime_utc      '2025-06-20 17:26:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6esd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    6ESD 
#
_exptl.entry_id    6ESD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6ESD 
_cell.length_a            151.61 
_cell.length_b            172.6 
_cell.length_c            94.67 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ESD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     6ESD 
_atom_sites.fract_transf_matrix[1][1]    0.006596 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005794 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010563 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD B 1 501 1 FAD FAD . 
D 3 CL B 1 502 2 CL CL . 
E 2 FAD A 1 501 2 FAD FAD . 
F 3 CL A 1 502 1 CL CL . 
G 4 HOH B 1 601 21 HOH HOH . 
G 4 HOH B 2 602 33 HOH HOH . 
G 4 HOH B 3 603 47 HOH HOH . 
G 4 HOH B 4 604 55 HOH HOH . 
G 4 HOH B 5 605 57 HOH HOH . 
G 4 HOH B 6 606 27 HOH HOH . 
G 4 HOH B 7 607 18 HOH HOH . 
G 4 HOH B 8 608 30 HOH HOH . 
G 4 HOH B 9 609 17 HOH HOH . 
G 4 HOH B 10 610 54 HOH HOH . 
G 4 HOH B 11 611 24 HOH HOH . 
G 4 HOH B 12 612 58 HOH HOH . 
G 4 HOH B 13 613 7 HOH HOH . 
G 4 HOH B 14 614 5 HOH HOH . 
G 4 HOH B 15 615 16 HOH HOH . 
G 4 HOH B 16 616 51 HOH HOH . 
G 4 HOH B 17 617 37 HOH HOH . 
G 4 HOH B 18 618 9 HOH HOH . 
G 4 HOH B 19 619 38 HOH HOH . 
G 4 HOH B 20 620 6 HOH HOH . 
G 4 HOH B 21 621 53 HOH HOH . 
G 4 HOH B 22 622 43 HOH HOH . 
G 4 HOH B 23 623 50 HOH HOH . 
H 4 HOH A 1 601 14 HOH HOH . 
H 4 HOH A 2 602 35 HOH HOH . 
H 4 HOH A 3 603 36 HOH HOH . 
H 4 HOH A 4 604 45 HOH HOH . 
H 4 HOH A 5 605 26 HOH HOH . 
H 4 HOH A 6 606 8 HOH HOH . 
H 4 HOH A 7 607 56 HOH HOH . 
H 4 HOH A 8 608 2 HOH HOH . 
H 4 HOH A 9 609 22 HOH HOH . 
H 4 HOH A 10 610 4 HOH HOH . 
H 4 HOH A 11 611 3 HOH HOH . 
H 4 HOH A 12 612 48 HOH HOH . 
H 4 HOH A 13 613 32 HOH HOH . 
H 4 HOH A 14 614 13 HOH HOH . 
H 4 HOH A 15 615 34 HOH HOH . 
H 4 HOH A 16 616 25 HOH HOH . 
H 4 HOH A 17 617 1 HOH HOH . 
H 4 HOH A 18 618 41 HOH HOH . 
H 4 HOH A 19 619 39 HOH HOH . 
H 4 HOH A 20 620 11 HOH HOH . 
H 4 HOH A 21 621 29 HOH HOH . 
H 4 HOH A 22 622 19 HOH HOH . 
H 4 HOH A 23 623 12 HOH HOH . 
H 4 HOH A 24 624 10 HOH HOH . 
H 4 HOH A 25 625 49 HOH HOH . 
H 4 HOH A 26 626 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . E 2 35.081 60.394 19.066 1 38.66 ? PA FAD 501 A 1 
HETATM 2 O O1A FAD . . . E 2 35.745 61.299 18.075 1 39.23 ? O1A FAD 501 A 1 
HETATM 3 O O2A FAD . . . E 2 35.277 58.908 18.825 1 35.16 ? O2A FAD 501 A 1 
HETATM 4 O O5B FAD . . . E 2 33.558 60.771 19.169 1 39.89 ? O5B FAD 501 A 1 
HETATM 5 C C5B FAD . . . E 2 33.262 62.135 18.955 1 40.3 ? C5B FAD 501 A 1 
HETATM 6 C C4B FAD . . . E 2 31.859 62.171 18.492 1 42.55 ? C4B FAD 501 A 1 
HETATM 7 O O4B FAD . . . E 2 31.396 63.587 18.513 1 45.41 ? O4B FAD 501 A 1 
HETATM 8 C C3B FAD . . . E 2 31.739 61.693 17.097 1 45.01 ? C3B FAD 501 A 1 
HETATM 9 O O3B FAD . . . E 2 30.767 60.622 17.057 1 48.2 ? O3B FAD 501 A 1 
HETATM 10 C C2B FAD . . . E 2 31.264 62.823 16.266 1 44.85 ? C2B FAD 501 A 1 
HETATM 11 O O2B FAD . . . E 2 30.287 62.381 15.293 1 47.56 ? O2B FAD 501 A 1 
HETATM 12 C C1B FAD . . . E 2 30.619 63.707 17.238 1 46.49 ? C1B FAD 501 A 1 
HETATM 13 N N9A FAD . . . E 2 30.542 65.062 16.899 1 44.57 ? N9A FAD 501 A 1 
HETATM 14 C C8A FAD . . . E 2 31.395 65.894 16.632 1 44.52 ? C8A FAD 501 A 1 
HETATM 15 N N7A FAD . . . E 2 31.107 66.926 16.436 1 43.97 ? N7A FAD 501 A 1 
HETATM 16 C C5A FAD . . . E 2 29.963 67.302 16.484 1 37.73 ? C5A FAD 501 A 1 
HETATM 17 C C6A FAD . . . E 2 28.869 68.44 16.355 1 38.42 ? C6A FAD 501 A 1 
HETATM 18 N N6A FAD . . . E 2 29.163 69.773 16.015 1 44.1 ? N6A FAD 501 A 1 
HETATM 19 N N1A FAD . . . E 2 27.517 68.06 16.588 1 47.18 ? N1A FAD 501 A 1 
HETATM 20 C C2A FAD . . . E 2 27.292 66.891 16.862 1 47.21 ? C2A FAD 501 A 1 
HETATM 21 N N3A FAD . . . E 2 28.033 65.977 16.986 1 45.19 ? N3A FAD 501 A 1 
HETATM 22 C C4A FAD . . . E 2 29.215 65.924 16.876 1 39.34 ? C4A FAD 501 A 1 
HETATM 23 N N1 FAD . . . E 2 42.262 53.817 19.933 1 44.97 ? N1 FAD 501 A 1 
HETATM 24 C C2 FAD . . . E 2 42.756 52.706 20.754 1 40.9 ? C2 FAD 501 A 1 
HETATM 25 O O2 FAD . . . E 2 42.629 52.797 21.931 1 44.86 ? O2 FAD 501 A 1 
HETATM 26 N N3 FAD . . . E 2 43.368 51.588 20.154 1 44.57 ? N3 FAD 501 A 1 
HETATM 27 C C4 FAD . . . E 2 43.475 51.508 18.794 1 43.05 ? C4 FAD 501 A 1 
HETATM 28 O O4 FAD . . . E 2 43.853 50.467 18.309 1 43 ? O4 FAD 501 A 1 
HETATM 29 C C4X FAD . . . E 2 43.025 52.619 17.951 1 42.72 ? C4X FAD 501 A 1 
HETATM 30 N N5 FAD . . . E 2 43.104 52.603 16.631 1 45.6 ? N5 FAD 501 A 1 
HETATM 31 C C5X FAD . . . E 2 42.547 53.756 15.872 1 47.58 ? C5X FAD 501 A 1 
HETATM 32 C C6 FAD . . . E 2 42.627 53.753 14.476 1 48.81 ? C6 FAD 501 A 1 
HETATM 33 C C7 FAD . . . E 2 42.106 54.826 13.736 1 48.04 ? C7 FAD 501 A 1 
HETATM 34 C C7M FAD . . . E 2 42.213 54.794 12.215 1 45.7 ? C7M FAD 501 A 1 
HETATM 35 C C8 FAD . . . E 2 41.502 55.902 14.395 1 49.41 ? C8 FAD 501 A 1 
HETATM 36 C C8M FAD . . . E 2 40.921 57.092 13.615 1 49.15 ? C8M FAD 501 A 1 
HETATM 37 C C9 FAD . . . E 2 41.413 55.921 15.787 1 45.33 ? C9 FAD 501 A 1 
HETATM 38 C C9A FAD . . . E 2 41.932 54.844 16.529 1 49.16 ? C9A FAD 501 A 1 
HETATM 39 N N10 FAD . . . E 2 41.841 54.857 17.952 1 50.08 ? N10 FAD 501 A 1 
HETATM 40 C C10 FAD . . . E 2 42.378 53.777 18.649 1 45.15 ? C10 FAD 501 A 1 
HETATM 41 C C1' FAD . . . E 2 41.24 55.987 18.743 1 44.27 ? C1' FAD 501 A 1 
HETATM 42 C C2' FAD . . . E 2 39.833 55.808 19.293 1 47.73 ? C2' FAD 501 A 1 
HETATM 43 O O2' FAD . . . E 2 38.982 55.57 18.212 1 47.24 ? O2' FAD 501 A 1 
HETATM 44 C C3' FAD . . . E 2 39.521 57.148 19.999 1 46.87 ? C3' FAD 501 A 1 
HETATM 45 O O3' FAD . . . E 2 40.539 57.486 20.904 1 41.65 ? O3' FAD 501 A 1 
HETATM 46 C C4' FAD . . . E 2 38.227 57.192 20.764 1 41.46 ? C4' FAD 501 A 1 
HETATM 47 O O4' FAD . . . E 2 37.221 56.454 20.11 1 39.55 ? O4' FAD 501 A 1 
HETATM 48 C C5' FAD . . . E 2 37.789 58.649 20.909 1 41.8 ? C5' FAD 501 A 1 
HETATM 49 O O5' FAD . . . E 2 36.543 58.649 21.627 1 46.25 ? O5' FAD 501 A 1 
HETATM 50 P P FAD . . . E 2 35.8 60.04 21.825 1 44.65 ? P FAD 501 A 1 
HETATM 51 O O1P FAD . . . E 2 36.675 60.917 22.695 1 44.39 ? O1P FAD 501 A 1 
HETATM 52 O O2P FAD . . . E 2 34.387 59.828 22.308 1 42.36 ? O2P FAD 501 A 1 
HETATM 53 O O3P FAD . . . E 2 35.722 60.844 20.446 1 50.17 ? O3P FAD 501 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#