data_6ESJ # _model_server_result.job_id hpalKItuDkqNhOysWVvJAA _model_server_result.datetime_utc '2024-11-05 11:27:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6esj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":612}' # _entry.id 6ESJ # _exptl.entry_id 6ESJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 5 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ESJ _cell.length_a 75.04 _cell.length_b 79.22 _cell.length_c 228.35 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ESJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G,H,I,J,V 1 1 B,E,F,K,L,M,N,O,P,Q,R,S,T,U,W 1 2 B,E,F,K,L,M,N,O,P,Q,R,S,T,U,W 2 1 A,C,D,G,H,I,J,V 2 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_544 -x,y-1/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 -39.61 -114.175 3 'crystal symmetry operation' 3_554 -x,y+1/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 39.61 -114.175 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 P N N ? 5 Q N N ? 5 R N N ? 5 S N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG A 621 NAG 2 n C NAG 2 C 2 NAG A 622 NAG 2 n D NAG 1 D 1 NAG A 671 NAG 2 n D NAG 2 D 2 NAG A 672 NAG 2 n E NAG 1 E 1 NAG B 631 NAG 2 n E NAG 2 E 2 NAG B 632 NAG 2 n F NAG 1 F 1 NAG B 661 NAG 2 n F NAG 2 F 2 NAG B 662 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 65 A CYS 65 1_555 A SG CYS 92 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 252 A CYS 252 1_555 A SG CYS 263 A CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 A SG CYS 400 A CYS 400 1_555 A SG CYS 519 A CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 65 B CYS 65 1_555 B SG CYS 92 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf5 B SG CYS 252 B CYS 252 1_555 B SG CYS 263 B CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 B SG CYS 400 B CYS 400 1_555 B SG CYS 519 B CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A ND2 ASN 17 A ASN 17 1_555 G C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale2 A ND2 ASN 106 A ASN 106 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale3 A ND2 ASN 241 A ASN 241 1_555 H C1 NAG . A NAG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale4 A ND2 ASN 341 A ASN 341 1_555 I C1 NAG . A NAG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale5 A ND2 ASN 481 A ASN 481 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale6 B ND2 ASN 17 B ASN 17 1_555 K C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale7 B ND2 ASN 57 B ASN 57 1_555 L C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? covale ? covale8 B ND2 ASN 241 B ASN 241 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale9 B ND2 ASN 256 B ASN 256 1_555 M C1 NAG . B NAG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale10 B ND2 ASN 341 B ASN 341 1_555 N C1 NAG . B NAG 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale11 B ND2 ASN 455 B ASN 455 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale12 B ND2 ASN 481 B ASN 481 1_555 O C1 NAG . B NAG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.478 ? covale ? covale13 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale14 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale15 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.462 ? covale ? covale16 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6ESJ _atom_sites.fract_transf_matrix[1][1] 0.013326 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012623 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004379 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 NAG A 1 601 601 NAG NAG . H 3 NAG A 1 604 631 NAG NAG . I 3 NAG A 1 605 651 NAG NAG . J 4 PRM A 1 608 540 PRM PRM . K 3 NAG B 1 601 601 NAG NAG . L 3 NAG B 1 602 611 NAG NAG . M 3 NAG B 1 605 641 NAG NAG . N 3 NAG B 1 606 651 NAG NAG . O 3 NAG B 1 609 671 NAG NAG . P 5 CL B 1 610 1546 CL CL . Q 5 CL B 1 611 1547 CL CL . R 5 CL B 1 612 1549 CL CL . S 5 CL B 1 613 1550 CL CL . T 6 GLY B 1 614 1642 GLY GLY . U 4 PRM B 1 615 540 PRM PRM . V 7 HOH A 1 701 47 HOH HOH . V 7 HOH A 2 702 10 HOH HOH . V 7 HOH A 3 703 97 HOH HOH . V 7 HOH A 4 704 140 HOH HOH . V 7 HOH A 5 705 60 HOH HOH . V 7 HOH A 6 706 143 HOH HOH . V 7 HOH A 7 707 116 HOH HOH . V 7 HOH A 8 708 99 HOH HOH . V 7 HOH A 9 709 4 HOH HOH . V 7 HOH A 10 710 52 HOH HOH . V 7 HOH A 11 711 59 HOH HOH . V 7 HOH A 12 712 131 HOH HOH . V 7 HOH A 13 713 94 HOH HOH . V 7 HOH A 14 714 103 HOH HOH . V 7 HOH A 15 715 13 HOH HOH . V 7 HOH A 16 716 27 HOH HOH . V 7 HOH A 17 717 51 HOH HOH . V 7 HOH A 18 718 28 HOH HOH . V 7 HOH A 19 719 7 HOH HOH . V 7 HOH A 20 720 120 HOH HOH . V 7 HOH A 21 721 42 HOH HOH . V 7 HOH A 22 722 24 HOH HOH . V 7 HOH A 23 723 110 HOH HOH . V 7 HOH A 24 724 118 HOH HOH . V 7 HOH A 25 725 134 HOH HOH . V 7 HOH A 26 726 83 HOH HOH . V 7 HOH A 27 727 23 HOH HOH . V 7 HOH A 28 728 104 HOH HOH . V 7 HOH A 29 729 22 HOH HOH . V 7 HOH A 30 730 65 HOH HOH . V 7 HOH A 31 731 106 HOH HOH . V 7 HOH A 32 732 144 HOH HOH . V 7 HOH A 33 733 2 HOH HOH . V 7 HOH A 34 734 20 HOH HOH . V 7 HOH A 35 735 141 HOH HOH . V 7 HOH A 36 736 31 HOH HOH . V 7 HOH A 37 737 136 HOH HOH . V 7 HOH A 38 738 142 HOH HOH . V 7 HOH A 39 739 91 HOH HOH . V 7 HOH A 40 740 123 HOH HOH . V 7 HOH A 41 741 86 HOH HOH . V 7 HOH A 42 742 122 HOH HOH . V 7 HOH A 43 743 138 HOH HOH . V 7 HOH A 44 744 137 HOH HOH . V 7 HOH A 45 745 114 HOH HOH . V 7 HOH A 46 746 129 HOH HOH . V 7 HOH A 47 747 75 HOH HOH . V 7 HOH A 48 748 117 HOH HOH . V 7 HOH A 49 749 80 HOH HOH . V 7 HOH A 50 750 133 HOH HOH . V 7 HOH A 51 751 96 HOH HOH . V 7 HOH A 52 752 130 HOH HOH . V 7 HOH A 53 753 115 HOH HOH . V 7 HOH A 54 754 92 HOH HOH . V 7 HOH A 55 755 139 HOH HOH . W 7 HOH B 1 701 126 HOH HOH . W 7 HOH B 2 702 82 HOH HOH . W 7 HOH B 3 703 44 HOH HOH . W 7 HOH B 4 704 100 HOH HOH . W 7 HOH B 5 705 54 HOH HOH . W 7 HOH B 6 706 63 HOH HOH . W 7 HOH B 7 707 72 HOH HOH . W 7 HOH B 8 708 32 HOH HOH . W 7 HOH B 9 709 66 HOH HOH . W 7 HOH B 10 710 36 HOH HOH . W 7 HOH B 11 711 48 HOH HOH . W 7 HOH B 12 712 40 HOH HOH . W 7 HOH B 13 713 89 HOH HOH . W 7 HOH B 14 714 43 HOH HOH . W 7 HOH B 15 715 69 HOH HOH . W 7 HOH B 16 716 14 HOH HOH . W 7 HOH B 17 717 105 HOH HOH . W 7 HOH B 18 718 6 HOH HOH . W 7 HOH B 19 719 112 HOH HOH . W 7 HOH B 20 720 108 HOH HOH . W 7 HOH B 21 721 119 HOH HOH . W 7 HOH B 22 722 50 HOH HOH . W 7 HOH B 23 723 29 HOH HOH . W 7 HOH B 24 724 74 HOH HOH . W 7 HOH B 25 725 37 HOH HOH . W 7 HOH B 26 726 113 HOH HOH . W 7 HOH B 27 727 41 HOH HOH . W 7 HOH B 28 728 12 HOH HOH . W 7 HOH B 29 729 26 HOH HOH . W 7 HOH B 30 730 68 HOH HOH . W 7 HOH B 31 731 19 HOH HOH . W 7 HOH B 32 732 3 HOH HOH . W 7 HOH B 33 733 102 HOH HOH . W 7 HOH B 34 734 38 HOH HOH . W 7 HOH B 35 735 61 HOH HOH . W 7 HOH B 36 736 9 HOH HOH . W 7 HOH B 37 737 101 HOH HOH . W 7 HOH B 38 738 145 HOH HOH . W 7 HOH B 39 739 33 HOH HOH . W 7 HOH B 40 740 55 HOH HOH . W 7 HOH B 41 741 58 HOH HOH . W 7 HOH B 42 742 39 HOH HOH . W 7 HOH B 43 743 5 HOH HOH . W 7 HOH B 44 744 49 HOH HOH . W 7 HOH B 45 745 90 HOH HOH . W 7 HOH B 46 746 87 HOH HOH . W 7 HOH B 47 747 98 HOH HOH . W 7 HOH B 48 748 85 HOH HOH . W 7 HOH B 49 749 18 HOH HOH . W 7 HOH B 50 750 57 HOH HOH . W 7 HOH B 51 751 79 HOH HOH . W 7 HOH B 52 752 125 HOH HOH . W 7 HOH B 53 753 62 HOH HOH . W 7 HOH B 54 754 34 HOH HOH . W 7 HOH B 55 755 15 HOH HOH . W 7 HOH B 56 756 81 HOH HOH . W 7 HOH B 57 757 76 HOH HOH . W 7 HOH B 58 758 8 HOH HOH . W 7 HOH B 59 759 70 HOH HOH . W 7 HOH B 60 760 95 HOH HOH . W 7 HOH B 61 761 109 HOH HOH . W 7 HOH B 62 762 127 HOH HOH . W 7 HOH B 63 763 135 HOH HOH . W 7 HOH B 64 764 16 HOH HOH . W 7 HOH B 65 765 45 HOH HOH . W 7 HOH B 66 766 21 HOH HOH . W 7 HOH B 67 767 78 HOH HOH . W 7 HOH B 68 768 67 HOH HOH . W 7 HOH B 69 769 124 HOH HOH . W 7 HOH B 70 770 88 HOH HOH . W 7 HOH B 71 771 132 HOH HOH . W 7 HOH B 72 772 73 HOH HOH . W 7 HOH B 73 773 53 HOH HOH . W 7 HOH B 74 774 111 HOH HOH . W 7 HOH B 75 775 64 HOH HOH . W 7 HOH B 76 776 1 HOH HOH . W 7 HOH B 77 777 56 HOH HOH . W 7 HOH B 78 778 121 HOH HOH . W 7 HOH B 79 779 128 HOH HOH . W 7 HOH B 80 780 11 HOH HOH . W 7 HOH B 81 781 71 HOH HOH . W 7 HOH B 82 782 35 HOH HOH . W 7 HOH B 83 783 84 HOH HOH . W 7 HOH B 84 784 107 HOH HOH . W 7 HOH B 85 785 77 HOH HOH . W 7 HOH B 86 786 46 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id R _atom_site.label_entity_id 5 _atom_site.Cartn_x -39.636 _atom_site.Cartn_y 11.417 _atom_site.Cartn_z -52.678 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 149.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 612 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #