data_6ETI # _model_server_result.job_id 8gatg9vMUIxuaL1ltCJ87w _model_server_result.datetime_utc '2024-11-21 22:46:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eti # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1101}' # _entry.id 6ETI # _exptl.entry_id 6ETI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 523.664 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '~{tert}-butyl 3-[(2~{S},5~{S},8~{S})-14-cyclopentyloxy-2-(2-methylpropyl)-4,7-bis(oxidanylidene)-3,6,17-triazatetracyclo[8.7.0.0^{3,8}.0^{11,16}]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ETI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ETI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n G NAG 1 G 1 NAG A 1001 NAG 4 n G NAG 2 G 2 NAG A 1002 NAG 4 n H NAG 1 H 1 NAG B 1001 NAG 4 n H NAG 2 H 2 NAG B 1002 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 592 A CYS 592 1_555 A SG CYS 608 A CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 603 A CYS 603 1_555 B SG CYS 603 B CYS 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf3 B SG CYS 592 B CYS 592 1_555 B SG CYS 608 B CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 C SG CYS 23 C CYS 23 1_555 C SG CYS 88 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf5 D SG CYS 22 D CYS 22 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 E SG CYS 23 E CYS 23 1_555 E SG CYS 88 E CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf7 F SG CYS 22 F CYS 22 1_555 F SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? covale ? covale1 A ND2 ASN 596 A ASN 596 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? covale ? covale2 B ND2 ASN 596 B ASN 596 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale3 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale4 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? # _chem_comp.formula 'C30 H41 N3 O5' _chem_comp.formula_weight 523.664 _chem_comp.id BWQ _chem_comp.mon_nstd_flag . _chem_comp.name '~{tert}-butyl 3-[(2~{S},5~{S},8~{S})-14-cyclopentyloxy-2-(2-methylpropyl)-4,7-bis(oxidanylidene)-3,6,17-triazatetracyclo[8.7.0.0^{3,8}.0^{11,16}]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C14 BWQ sing 70 n n C15 C16 BWQ sing 71 n n C14 C13 BWQ sing 72 n n C16 C12 BWQ sing 73 n n C13 C12 BWQ sing 74 n n C12 O11 BWQ sing 75 n n O11 C10 BWQ sing 76 n n C10 C09 BWQ doub 77 n y C10 C17 BWQ sing 78 n y C09 C08 BWQ sing 79 n y C17 C18 BWQ doub 80 n y C08 N07 BWQ sing 81 n y C08 C19 BWQ doub 82 n y C18 C19 BWQ sing 83 n y N07 C06 BWQ sing 84 n y C19 C20 BWQ sing 85 n y C01 C02 BWQ sing 86 n n C02 C03 BWQ sing 87 n n C02 C04 BWQ sing 88 n n C06 C20 BWQ doub 89 n y C06 C05 BWQ sing 90 n n C20 C21 BWQ sing 91 n n C05 C04 BWQ sing 92 n n C05 N38 BWQ sing 93 n n C21 C22 BWQ sing 94 n n N38 C22 BWQ sing 95 n n N38 C36 BWQ sing 96 n n C22 C23 BWQ sing 97 n n O37 C36 BWQ doub 98 n n C36 C26 BWQ sing 99 n n C23 O24 BWQ doub 100 n n C23 N25 BWQ sing 101 n n C26 N25 BWQ sing 102 n n C26 C27 BWQ sing 103 n n C27 C28 BWQ sing 104 n n C28 C29 BWQ sing 105 n n C35 C32 BWQ sing 106 n n O31 C29 BWQ sing 107 n n O31 C32 BWQ sing 108 n n C33 C32 BWQ sing 109 n n C29 O30 BWQ doub 110 n n C32 C34 BWQ sing 111 n n C01 H1 BWQ sing 112 n n C01 H2 BWQ sing 113 n n C01 H3 BWQ sing 114 n n C02 H4 BWQ sing 115 n n C03 H5 BWQ sing 116 n n C03 H6 BWQ sing 117 n n C03 H7 BWQ sing 118 n n C04 H8 BWQ sing 119 n n C04 H9 BWQ sing 120 n n C05 H10 BWQ sing 121 n n C09 H11 BWQ sing 122 n n C12 H12 BWQ sing 123 n n C13 H13 BWQ sing 124 n n C13 H14 BWQ sing 125 n n C14 H15 BWQ sing 126 n n C14 H16 BWQ sing 127 n n C15 H17 BWQ sing 128 n n C15 H18 BWQ sing 129 n n C16 H19 BWQ sing 130 n n C16 H20 BWQ sing 131 n n C17 H21 BWQ sing 132 n n C18 H22 BWQ sing 133 n n C21 H23 BWQ sing 134 n n C21 H24 BWQ sing 135 n n C22 H25 BWQ sing 136 n n C26 H26 BWQ sing 137 n n C27 H27 BWQ sing 138 n n C27 H28 BWQ sing 139 n n C28 H29 BWQ sing 140 n n C28 H30 BWQ sing 141 n n C33 H31 BWQ sing 142 n n C33 H32 BWQ sing 143 n n C33 H33 BWQ sing 144 n n C34 H34 BWQ sing 145 n n C34 H35 BWQ sing 146 n n C34 H36 BWQ sing 147 n n C35 H37 BWQ sing 148 n n C35 H38 BWQ sing 149 n n C35 H39 BWQ sing 150 n n N07 H40 BWQ sing 151 n n N25 H41 BWQ sing 152 n n # _atom_sites.entry_id 6ETI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 BWQ A 1 1101 1 BWQ MZ . J 5 BWQ B 1 1101 1 BWQ MZ . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 BWQ . . . J 5 168.127 154.36 164.168 1 52.28 ? C01 BWQ 1101 B 1 HETATM 2 C C02 BWQ . . . J 5 168.488 155.864 164.273 1 52.28 ? C02 BWQ 1101 B 1 HETATM 3 C C03 BWQ . . . J 5 169.966 156.031 164.537 1 52.28 ? C03 BWQ 1101 B 1 HETATM 4 C C04 BWQ . . . J 5 167.777 156.457 165.52 1 52.28 ? C04 BWQ 1101 B 1 HETATM 5 C C05 BWQ . . . J 5 167.912 157.991 165.495 1 52.28 ? C05 BWQ 1101 B 1 HETATM 6 C C06 BWQ . . . J 5 166.953 158.539 164.491 1 52.28 ? C06 BWQ 1101 B 1 HETATM 7 C C08 BWQ . . . J 5 166.073 159.244 162.499 1 52.28 ? C08 BWQ 1101 B 1 HETATM 8 C C09 BWQ . . . J 5 165.921 159.547 161.187 1 52.28 ? C09 BWQ 1101 B 1 HETATM 9 C C10 BWQ . . . J 5 164.756 160.063 160.704 1 52.28 ? C10 BWQ 1101 B 1 HETATM 10 C C12 BWQ . . . J 5 163.559 159.83 158.725 1 52.28 ? C12 BWQ 1101 B 1 HETATM 11 C C13 BWQ . . . J 5 164.013 158.554 158.059 1 52.28 ? C13 BWQ 1101 B 1 HETATM 12 C C14 BWQ . . . J 5 163.248 158.509 156.728 1 52.28 ? C14 BWQ 1101 B 1 HETATM 13 C C15 BWQ . . . J 5 163.035 159.995 156.359 1 52.28 ? C15 BWQ 1101 B 1 HETATM 14 C C16 BWQ . . . J 5 163.128 160.796 157.678 1 52.28 ? C16 BWQ 1101 B 1 HETATM 15 C C17 BWQ . . . J 5 163.682 160.294 161.568 1 52.28 ? C17 BWQ 1101 B 1 HETATM 16 C C18 BWQ . . . J 5 163.802 159.981 162.969 1 52.28 ? C18 BWQ 1101 B 1 HETATM 17 C C19 BWQ . . . J 5 165.028 159.441 163.444 1 52.28 ? C19 BWQ 1101 B 1 HETATM 18 C C20 BWQ . . . J 5 165.657 158.956 164.787 1 52.28 ? C20 BWQ 1101 B 1 HETATM 19 C C21 BWQ . . . J 5 165.205 158.856 166.256 1 52.28 ? C21 BWQ 1101 B 1 HETATM 20 C C22 BWQ . . . J 5 166.418 159.39 167.015 1 52.28 ? C22 BWQ 1101 B 1 HETATM 21 C C23 BWQ . . . J 5 166.157 159.428 168.508 1 52.28 ? C23 BWQ 1101 B 1 HETATM 22 C C26 BWQ . . . J 5 168.522 158.945 169.196 1 52.28 ? C26 BWQ 1101 B 1 HETATM 23 C C27 BWQ . . . J 5 168.484 157.641 170.035 1 52.28 ? C27 BWQ 1101 B 1 HETATM 24 C C28 BWQ . . . J 5 169.893 157.009 170.16 1 52.28 ? C28 BWQ 1101 B 1 HETATM 25 C C29 BWQ . . . J 5 169.889 156.093 171.414 1 52.28 ? C29 BWQ 1101 B 1 HETATM 26 C C32 BWQ . . . J 5 170.496 153.704 171.701 1 52.28 ? C32 BWQ 1101 B 1 HETATM 27 C C33 BWQ . . . J 5 171.947 154.116 171.401 1 52.28 ? C33 BWQ 1101 B 1 HETATM 28 C C34 BWQ . . . J 5 170.333 153.411 173.203 1 52.28 ? C34 BWQ 1101 B 1 HETATM 29 C C35 BWQ . . . J 5 170.174 152.414 170.943 1 52.28 ? C35 BWQ 1101 B 1 HETATM 30 C C36 BWQ . . . J 5 168.698 158.601 167.721 1 52.28 ? C36 BWQ 1101 B 1 HETATM 31 N N07 BWQ . . . J 5 167.051 158.751 163.225 1 52.28 ? N07 BWQ 1101 B 1 HETATM 32 N N25 BWQ . . . J 5 167.288 159.64 169.412 1 52.28 ? N25 BWQ 1101 B 1 HETATM 33 N N38 BWQ . . . J 5 167.562 158.519 166.82 1 52.28 ? N38 BWQ 1101 B 1 HETATM 34 O O11 BWQ . . . J 5 164.713 160.374 159.318 1 52.28 ? O11 BWQ 1101 B 1 HETATM 35 O O24 BWQ . . . J 5 164.869 159.254 169.001 1 52.28 ? O24 BWQ 1101 B 1 HETATM 36 O O30 BWQ . . . J 5 170.103 156.581 172.466 1 52.28 ? O30 BWQ 1101 B 1 HETATM 37 O O31 BWQ . . . J 5 169.568 154.711 171.264 1 52.28 ? O31 BWQ 1101 B 1 HETATM 38 O O37 BWQ . . . J 5 169.966 158.358 167.197 1 52.28 ? O37 BWQ 1101 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 38 #