data_6ETJ # _model_server_result.job_id IFbCe7W95xxI9Wy6zA_wiw _model_server_result.datetime_utc '2024-11-26 06:48:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6etj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 6ETJ # _exptl.entry_id 6ETJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 6-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6ETJ _cell.length_a 103.774 _cell.length_b 103.774 _cell.length_c 259.563 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ETJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_554 x,x-y,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 -43.2605 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 253 A ARG 252 1_555 A N NEP 254 A NEP 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C NEP 254 A NEP 253 1_555 A N GLY 255 A GLY 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id F6P _chem_comp.mon_nstd_flag n _chem_comp.name 6-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms ? # _pdbx_chem_comp_identifier.comp_id F6P _pdbx_chem_comp_identifier.identifier b-D-Fruf6PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 6ETJ _atom_sites.fract_transf_matrix[1][1] 0.009636 _atom_sites.fract_transf_matrix[1][2] 0.005564 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011127 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 601 1 DMS DMS . C 3 F6P A 1 602 1 F6P F6P . D 4 BWW A 1 603 1 BWW 241 . E 5 ADP A 1 604 1 ADP ADP . F 6 HOH A 1 701 5 HOH HOH . F 6 HOH A 2 702 73 HOH HOH . F 6 HOH A 3 703 68 HOH HOH . F 6 HOH A 4 704 50 HOH HOH . F 6 HOH A 5 705 101 HOH HOH . F 6 HOH A 6 706 3 HOH HOH . F 6 HOH A 7 707 49 HOH HOH . F 6 HOH A 8 708 13 HOH HOH . F 6 HOH A 9 709 93 HOH HOH . F 6 HOH A 10 710 83 HOH HOH . F 6 HOH A 11 711 55 HOH HOH . F 6 HOH A 12 712 72 HOH HOH . F 6 HOH A 13 713 36 HOH HOH . F 6 HOH A 14 714 61 HOH HOH . F 6 HOH A 15 715 60 HOH HOH . F 6 HOH A 16 716 30 HOH HOH . F 6 HOH A 17 717 26 HOH HOH . F 6 HOH A 18 718 17 HOH HOH . F 6 HOH A 19 719 71 HOH HOH . F 6 HOH A 20 720 64 HOH HOH . F 6 HOH A 21 721 88 HOH HOH . F 6 HOH A 22 722 43 HOH HOH . F 6 HOH A 23 723 44 HOH HOH . F 6 HOH A 24 724 6 HOH HOH . F 6 HOH A 25 725 48 HOH HOH . F 6 HOH A 26 726 19 HOH HOH . F 6 HOH A 27 727 102 HOH HOH . F 6 HOH A 28 728 27 HOH HOH . F 6 HOH A 29 729 40 HOH HOH . F 6 HOH A 30 730 2 HOH HOH . F 6 HOH A 31 731 65 HOH HOH . F 6 HOH A 32 732 9 HOH HOH . F 6 HOH A 33 733 87 HOH HOH . F 6 HOH A 34 734 41 HOH HOH . F 6 HOH A 35 735 98 HOH HOH . F 6 HOH A 36 736 25 HOH HOH . F 6 HOH A 37 737 45 HOH HOH . F 6 HOH A 38 738 29 HOH HOH . F 6 HOH A 39 739 46 HOH HOH . F 6 HOH A 40 740 70 HOH HOH . F 6 HOH A 41 741 74 HOH HOH . F 6 HOH A 42 742 23 HOH HOH . F 6 HOH A 43 743 35 HOH HOH . F 6 HOH A 44 744 24 HOH HOH . F 6 HOH A 45 745 4 HOH HOH . F 6 HOH A 46 746 47 HOH HOH . F 6 HOH A 47 747 18 HOH HOH . F 6 HOH A 48 748 75 HOH HOH . F 6 HOH A 49 749 67 HOH HOH . F 6 HOH A 50 750 33 HOH HOH . F 6 HOH A 51 751 63 HOH HOH . F 6 HOH A 52 752 34 HOH HOH . F 6 HOH A 53 753 62 HOH HOH . F 6 HOH A 54 754 42 HOH HOH . F 6 HOH A 55 755 31 HOH HOH . F 6 HOH A 56 756 81 HOH HOH . F 6 HOH A 57 757 14 HOH HOH . F 6 HOH A 58 758 79 HOH HOH . F 6 HOH A 59 759 38 HOH HOH . F 6 HOH A 60 760 10 HOH HOH . F 6 HOH A 61 761 99 HOH HOH . F 6 HOH A 62 762 37 HOH HOH . F 6 HOH A 63 763 11 HOH HOH . F 6 HOH A 64 764 21 HOH HOH . F 6 HOH A 65 765 1 HOH HOH . F 6 HOH A 66 766 12 HOH HOH . F 6 HOH A 67 767 22 HOH HOH . F 6 HOH A 68 768 76 HOH HOH . F 6 HOH A 69 769 15 HOH HOH . F 6 HOH A 70 770 16 HOH HOH . F 6 HOH A 71 771 8 HOH HOH . F 6 HOH A 72 772 80 HOH HOH . F 6 HOH A 73 773 32 HOH HOH . F 6 HOH A 74 774 7 HOH HOH . F 6 HOH A 75 775 82 HOH HOH . F 6 HOH A 76 776 84 HOH HOH . F 6 HOH A 77 777 28 HOH HOH . F 6 HOH A 78 778 56 HOH HOH . F 6 HOH A 79 779 53 HOH HOH . F 6 HOH A 80 780 77 HOH HOH . F 6 HOH A 81 781 78 HOH HOH . F 6 HOH A 82 782 66 HOH HOH . F 6 HOH A 83 783 97 HOH HOH . F 6 HOH A 84 784 100 HOH HOH . F 6 HOH A 85 785 59 HOH HOH . F 6 HOH A 86 786 20 HOH HOH . F 6 HOH A 87 787 92 HOH HOH . F 6 HOH A 88 788 51 HOH HOH . F 6 HOH A 89 789 58 HOH HOH . F 6 HOH A 90 790 85 HOH HOH . F 6 HOH A 91 791 69 HOH HOH . F 6 HOH A 92 792 89 HOH HOH . F 6 HOH A 93 793 96 HOH HOH . F 6 HOH A 94 794 90 HOH HOH . F 6 HOH A 95 795 54 HOH HOH . F 6 HOH A 96 796 39 HOH HOH . F 6 HOH A 97 797 86 HOH HOH . F 6 HOH A 98 798 57 HOH HOH . F 6 HOH A 99 799 95 HOH HOH . F 6 HOH A 100 800 94 HOH HOH . F 6 HOH A 101 801 52 HOH HOH . F 6 HOH A 102 802 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 F6P . . . C 3 7.432 21.293 -13.631 1 40.57 ? O1 F6P 602 A 1 HETATM 2 C C1 F6P . . . C 3 8.458 21.77 -14.485 1 33.18 ? C1 F6P 602 A 1 HETATM 3 C C2 F6P . . . C 3 9.728 20.966 -14.228 1 33.36 ? C2 F6P 602 A 1 HETATM 4 O O2 F6P . . . C 3 10.681 21.682 -15.019 1 37.46 ? O2 F6P 602 A 1 HETATM 5 C C3 F6P . . . C 3 9.604 19.483 -14.563 1 31 ? C3 F6P 602 A 1 HETATM 6 O O3 F6P . . . C 3 9.759 19.287 -15.955 1 34.73 ? O3 F6P 602 A 1 HETATM 7 C C4 F6P . . . C 3 10.703 18.859 -13.75 1 31.76 ? C4 F6P 602 A 1 HETATM 8 O O4 F6P . . . C 3 10.52 17.463 -13.468 1 32.63 ? O4 F6P 602 A 1 HETATM 9 C C5 F6P . . . C 3 10.572 19.66 -12.468 1 31.99 ? C5 F6P 602 A 1 HETATM 10 O O5 F6P . . . C 3 10.187 20.966 -12.881 1 31.26 ? O5 F6P 602 A 1 HETATM 11 C C6 F6P . . . C 3 11.836 19.712 -11.606 1 32.67 ? C6 F6P 602 A 1 HETATM 12 O O6 F6P . . . C 3 11.418 20.082 -10.297 1 33.12 ? O6 F6P 602 A 1 HETATM 13 P P F6P . . . C 3 11.691 19.173 -8.993 1 36.1 ? P F6P 602 A 1 HETATM 14 O O1P F6P . . . C 3 10.745 18.032 -9.246 1 33.46 ? O1P F6P 602 A 1 HETATM 15 O O2P F6P . . . C 3 11.371 20.121 -7.851 1 33 ? O2P F6P 602 A 1 HETATM 16 O O3P F6P . . . C 3 13.165 18.797 -8.994 1 32.37 ? O3P F6P 602 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 16 #