data_6EUB # _model_server_result.job_id KSwvGttnkdh7vTlaglNTrQ _model_server_result.datetime_utc '2025-02-05 14:02:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eub # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6EUB # _exptl.entry_id 6EUB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EUB _cell.length_a 133.02 _cell.length_b 133.77 _cell.length_c 39.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EUB _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 13 A CYS 188 1_555 A SG CYS 41 A CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf2 A SG CYS 166 A CYS 341 1_555 A SG CYS 179 A CYS 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 6EUB _atom_sites.fract_transf_matrix[1][1] 0.007518 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007476 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025233 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1PE A 1 501 1 1PE 1PE . C 3 HOH A 1 601 36 HOH HOH . C 3 HOH A 2 602 1 HOH HOH . C 3 HOH A 3 603 16 HOH HOH . C 3 HOH A 4 604 14 HOH HOH . C 3 HOH A 5 605 23 HOH HOH . C 3 HOH A 6 606 22 HOH HOH . C 3 HOH A 7 607 4 HOH HOH . C 3 HOH A 8 608 25 HOH HOH . C 3 HOH A 9 609 17 HOH HOH . C 3 HOH A 10 610 9 HOH HOH . C 3 HOH A 11 611 7 HOH HOH . C 3 HOH A 12 612 18 HOH HOH . C 3 HOH A 13 613 19 HOH HOH . C 3 HOH A 14 614 20 HOH HOH . C 3 HOH A 15 615 6 HOH HOH . C 3 HOH A 16 616 42 HOH HOH . C 3 HOH A 17 617 13 HOH HOH . C 3 HOH A 18 618 10 HOH HOH . C 3 HOH A 19 619 28 HOH HOH . C 3 HOH A 20 620 3 HOH HOH . C 3 HOH A 21 621 2 HOH HOH . C 3 HOH A 22 622 12 HOH HOH . C 3 HOH A 23 623 31 HOH HOH . C 3 HOH A 24 624 29 HOH HOH . C 3 HOH A 25 625 5 HOH HOH . C 3 HOH A 26 626 35 HOH HOH . C 3 HOH A 27 627 26 HOH HOH . C 3 HOH A 28 628 32 HOH HOH . C 3 HOH A 29 629 30 HOH HOH . C 3 HOH A 30 630 8 HOH HOH . C 3 HOH A 31 631 27 HOH HOH . C 3 HOH A 32 632 15 HOH HOH . C 3 HOH A 33 633 38 HOH HOH . C 3 HOH A 34 634 21 HOH HOH . C 3 HOH A 35 635 39 HOH HOH . C 3 HOH A 36 636 24 HOH HOH . C 3 HOH A 37 637 33 HOH HOH . C 3 HOH A 38 638 11 HOH HOH . C 3 HOH A 39 639 40 HOH HOH . C 3 HOH A 40 640 41 HOH HOH . C 3 HOH A 41 641 34 HOH HOH . C 3 HOH A 42 642 37 HOH HOH . C 3 HOH A 43 643 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . B 2 -5.112 -54.181 -2.058 1 54.23 ? OH2 1PE 501 A 1 HETATM 2 C C12 1PE . . . B 2 -4.335 -54.272 -0.861 1 61.94 ? C12 1PE 501 A 1 HETATM 3 C C22 1PE . . . B 2 -4.796 -53.108 0.04 1 67.91 ? C22 1PE 501 A 1 HETATM 4 O OH3 1PE . . . B 2 -5.136 -52.016 -0.827 1 76.38 ? OH3 1PE 501 A 1 HETATM 5 C C13 1PE . . . B 2 -4.604 -49.804 -1.72 1 73.63 ? C13 1PE 501 A 1 HETATM 6 C C23 1PE . . . B 2 -4.392 -50.824 -0.547 1 72.06 ? C23 1PE 501 A 1 HETATM 7 O OH4 1PE . . . B 2 -5.256 -48.598 -1.255 1 77.82 ? OH4 1PE 501 A 1 HETATM 8 C C14 1PE . . . B 2 -6.219 -47.676 -3.317 1 73.42 ? C14 1PE 501 A 1 HETATM 9 C C24 1PE . . . B 2 -5.172 -47.504 -2.185 1 75.52 ? C24 1PE 501 A 1 HETATM 10 O OH5 1PE . . . B 2 -7.165 -46.6 -3.279 1 71.82 ? OH5 1PE 501 A 1 HETATM 11 C C15 1PE . . . B 2 -9.449 -45.809 -3.673 1 61.14 ? C15 1PE 501 A 1 HETATM 12 C C25 1PE . . . B 2 -8.406 -46.924 -3.937 1 64.37 ? C25 1PE 501 A 1 HETATM 13 O OH6 1PE . . . B 2 -10.706 -46.217 -4.196 1 58.08 ? OH6 1PE 501 A 1 HETATM 14 C C16 1PE . . . B 2 -12.287 -44.748 -3.137 1 57.28 ? C16 1PE 501 A 1 HETATM 15 C C26 1PE . . . B 2 -11.746 -46.175 -3.21 1 55.76 ? C26 1PE 501 A 1 HETATM 16 O OH7 1PE . . . B 2 -13.623 -44.813 -3.562 1 60.17 ? OH7 1PE 501 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 16 #