data_6EUP # _model_server_result.job_id agexkWdVTpfzlqc3wKIzTA _model_server_result.datetime_utc '2025-03-02 23:49:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6eup # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":208}' # _entry.id 6EUP # _exptl.entry_id 6EUP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.13 _cell.angle_gamma 90 _cell.entry_id 6EUP _cell.length_a 68.919 _cell.length_b 39.75 _cell.length_c 255.63 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EUP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 S N N ? 5 T N N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 209 n n O1 H1 P6G sing 210 n n C2 C3 P6G sing 211 n n C2 H21 P6G sing 212 n n C2 H22 P6G sing 213 n n C3 O4 P6G sing 214 n n C3 H31 P6G sing 215 n n C3 H32 P6G sing 216 n n O4 C5 P6G sing 217 n n C5 C6 P6G sing 218 n n C5 H51 P6G sing 219 n n C5 H52 P6G sing 220 n n C6 O7 P6G sing 221 n n C6 H61 P6G sing 222 n n C6 H62 P6G sing 223 n n O7 C8 P6G sing 224 n n C8 C9 P6G sing 225 n n C8 H81 P6G sing 226 n n C8 H82 P6G sing 227 n n C9 O10 P6G sing 228 n n C9 H91 P6G sing 229 n n C9 H92 P6G sing 230 n n O10 C11 P6G sing 231 n n C11 C12 P6G sing 232 n n C11 H111 P6G sing 233 n n C11 H112 P6G sing 234 n n C12 O13 P6G sing 235 n n C12 H121 P6G sing 236 n n C12 H122 P6G sing 237 n n O13 C14 P6G sing 238 n n C14 C15 P6G sing 239 n n C14 H141 P6G sing 240 n n C14 H142 P6G sing 241 n n C15 O16 P6G sing 242 n n C15 H151 P6G sing 243 n n C15 H152 P6G sing 244 n n O16 C17 P6G sing 245 n n C17 C18 P6G sing 246 n n C17 H171 P6G sing 247 n n C17 H172 P6G sing 248 n n C18 O19 P6G sing 249 n n C18 H181 P6G sing 250 n n C18 H182 P6G sing 251 n n O19 H19 P6G sing 252 n n # _atom_sites.entry_id 6EUP _atom_sites.fract_transf_matrix[1][1] 0.01451 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001303 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003928 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CL A 1 201 1 CL CL . E 3 EDO A 1 202 3 EDO EDO . F 3 EDO A 1 203 5 EDO EDO . G 3 EDO A 1 204 6 EDO EDO . H 3 EDO A 1 205 8 EDO EDO . I 3 EDO A 1 206 12 EDO EDO . J 3 EDO A 1 207 14 EDO EDO . K 4 MPD A 1 208 3 MPD MPD . L 4 MPD A 1 209 4 MPD MPD . M 3 EDO B 1 201 2 EDO EDO . N 3 EDO B 1 202 4 EDO EDO . O 3 EDO B 1 203 7 EDO EDO . P 3 EDO B 1 204 11 EDO EDO . Q 3 EDO B 1 205 13 EDO EDO . R 4 MPD B 1 206 2 MPD MPD . S 5 P6G B 1 207 1 P6G P6G . T 5 P6G B 1 208 2 P6G P6G . U 6 PO4 B 1 209 1 PO4 PO4 . V 6 PO4 B 1 210 3 PO4 PO4 . W 3 EDO C 1 201 1 EDO EDO . X 3 EDO C 1 202 9 EDO EDO . Y 3 EDO C 1 203 10 EDO EDO . Z 3 EDO C 1 204 15 EDO EDO . AA 3 EDO C 1 205 16 EDO EDO . BA 3 EDO C 1 206 17 EDO EDO . CA 3 EDO C 1 207 18 EDO EDO . DA 4 MPD C 1 208 1 MPD MPD . EA 4 MPD C 1 209 5 MPD MPD . FA 6 PO4 C 1 210 2 PO4 PO4 . GA 7 HOH A 1 301 21 HOH HOH . GA 7 HOH A 2 302 13 HOH HOH . GA 7 HOH A 3 303 40 HOH HOH . GA 7 HOH A 4 304 4 HOH HOH . GA 7 HOH A 5 305 23 HOH HOH . GA 7 HOH A 6 306 15 HOH HOH . GA 7 HOH A 7 307 26 HOH HOH . GA 7 HOH A 8 308 24 HOH HOH . GA 7 HOH A 9 309 36 HOH HOH . GA 7 HOH A 10 310 35 HOH HOH . GA 7 HOH A 11 311 12 HOH HOH . GA 7 HOH A 12 312 9 HOH HOH . GA 7 HOH A 13 313 25 HOH HOH . GA 7 HOH A 14 314 39 HOH HOH . GA 7 HOH A 15 315 42 HOH HOH . GA 7 HOH A 16 316 5 HOH HOH . GA 7 HOH A 17 317 22 HOH HOH . GA 7 HOH A 18 318 51 HOH HOH . GA 7 HOH A 19 319 52 HOH HOH . GA 7 HOH A 20 320 47 HOH HOH . GA 7 HOH A 21 321 19 HOH HOH . GA 7 HOH A 22 322 17 HOH HOH . HA 7 HOH B 1 301 11 HOH HOH . HA 7 HOH B 2 302 30 HOH HOH . HA 7 HOH B 3 303 29 HOH HOH . HA 7 HOH B 4 304 2 HOH HOH . HA 7 HOH B 5 305 41 HOH HOH . HA 7 HOH B 6 306 49 HOH HOH . HA 7 HOH B 7 307 3 HOH HOH . HA 7 HOH B 8 308 44 HOH HOH . HA 7 HOH B 9 309 10 HOH HOH . HA 7 HOH B 10 310 27 HOH HOH . HA 7 HOH B 11 311 14 HOH HOH . HA 7 HOH B 12 312 50 HOH HOH . HA 7 HOH B 13 313 32 HOH HOH . HA 7 HOH B 14 314 20 HOH HOH . HA 7 HOH B 15 315 16 HOH HOH . HA 7 HOH B 16 316 38 HOH HOH . IA 7 HOH C 1 301 1 HOH HOH . IA 7 HOH C 2 302 43 HOH HOH . IA 7 HOH C 3 303 54 HOH HOH . IA 7 HOH C 4 304 6 HOH HOH . IA 7 HOH C 5 305 37 HOH HOH . IA 7 HOH C 6 306 53 HOH HOH . IA 7 HOH C 7 307 31 HOH HOH . IA 7 HOH C 8 308 48 HOH HOH . IA 7 HOH C 9 309 34 HOH HOH . IA 7 HOH C 10 310 28 HOH HOH . IA 7 HOH C 11 311 7 HOH HOH . IA 7 HOH C 12 312 46 HOH HOH . IA 7 HOH C 13 313 18 HOH HOH . IA 7 HOH C 14 314 33 HOH HOH . IA 7 HOH C 15 315 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . T 5 10.669 12.176 25.624 1 101.24 ? O1 P6G 208 B 1 HETATM 2 C C2 P6G . . . T 5 11.084 10.832 25.603 1 100.01 ? C2 P6G 208 B 1 HETATM 3 C C3 P6G . . . T 5 11.685 10.485 24.237 1 98.65 ? C3 P6G 208 B 1 HETATM 4 O O4 P6G . . . T 5 11.009 11.194 23.229 1 98.61 ? O4 P6G 208 B 1 HETATM 5 C C5 P6G . . . T 5 10.274 10.404 22.333 1 98.84 ? C5 P6G 208 B 1 HETATM 6 C C6 P6G . . . T 5 9.489 11.314 21.387 1 99.59 ? C6 P6G 208 B 1 HETATM 7 O O7 P6G . . . T 5 8.14 11.314 21.771 1 100.86 ? O7 P6G 208 B 1 HETATM 8 C C8 P6G . . . T 5 7.221 10.994 20.758 1 101.21 ? C8 P6G 208 B 1 HETATM 9 C C9 P6G . . . T 5 6.323 9.846 21.243 1 100.85 ? C9 P6G 208 B 1 HETATM 10 O O10 P6G . . . T 5 5.089 9.869 20.575 1 100.52 ? O10 P6G 208 B 1 HETATM 11 C C11 P6G . . . T 5 4.851 8.828 19.664 1 97.55 ? C11 P6G 208 B 1 HETATM 12 C C12 P6G . . . T 5 4.128 9.394 18.436 1 94.17 ? C12 P6G 208 B 1 HETATM 13 O O13 P6G . . . T 5 5.059 9.998 17.575 1 89.75 ? O13 P6G 208 B 1 HETATM 14 C C14 P6G . . . T 5 5.113 9.499 16.263 1 83.87 ? C14 P6G 208 B 1 HETATM 15 C C15 P6G . . . T 5 6.53 9.761 15.734 1 79.26 ? C15 P6G 208 B 1 HETATM 16 O O16 P6G . . . T 5 6.995 8.685 14.956 1 73.38 ? O16 P6G 208 B 1 HETATM 17 C C17 P6G . . . T 5 7.4 9.044 13.657 1 73.81 ? C17 P6G 208 B 1 HETATM 18 C C18 P6G . . . T 5 6.25 8.873 12.644 1 73.38 ? C18 P6G 208 B 1 HETATM 19 O O19 P6G . . . T 5 6.781 8.878 11.344 1 72.49 ? O19 P6G 208 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 443 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #