data_6EXS # _model_server_result.job_id FZyBbbxGECuTaBtUfwGF2g _model_server_result.datetime_utc '2024-12-24 00:54:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6exs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6EXS # _exptl.entry_id 6EXS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.75 _cell.angle_gamma 90 _cell.entry_id 6EXS _cell.length_a 60.04 _cell.length_b 55.576 _cell.length_c 100.866 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EXS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 279 n n C10 C9 OLC doub 280 n n C10 C11 OLC sing 281 n n C9 C8 OLC sing 282 n n C17 C16 OLC sing 283 z n C11 C12 OLC sing 284 n n C8 C7 OLC sing 285 n n C24 C22 OLC sing 286 n n C24 O25 OLC sing 287 n n C16 C15 OLC sing 288 n n C12 C13 OLC sing 289 n n C7 C6 OLC sing 290 n n C15 C14 OLC sing 291 n n C13 C14 OLC sing 292 n n C6 C5 OLC sing 293 n n C5 C4 OLC sing 294 n n C4 C3 OLC sing 295 n n C3 C2 OLC sing 296 n n C2 C1 OLC sing 297 n n C21 C22 OLC sing 298 n n C21 O20 OLC sing 299 n n C1 O19 OLC doub 300 n n C1 O20 OLC sing 301 n n C22 O23 OLC sing 302 n n C18 H18 OLC sing 303 n n C18 H18A OLC sing 304 n n C18 H18B OLC sing 305 n n C10 H10 OLC sing 306 n n C9 H9 OLC sing 307 n n C17 H17 OLC sing 308 n n C17 H17A OLC sing 309 n n C11 H11 OLC sing 310 n n C11 H11A OLC sing 311 n n C8 H8 OLC sing 312 n n C8 H8A OLC sing 313 n n C24 H24 OLC sing 314 n n C24 H24A OLC sing 315 n n C16 H16 OLC sing 316 n n C16 H16A OLC sing 317 n n C12 H12 OLC sing 318 n n C12 H12A OLC sing 319 n n C7 H7 OLC sing 320 n n C7 H7A OLC sing 321 n n C15 H15 OLC sing 322 n n C15 H15A OLC sing 323 n n C13 H13 OLC sing 324 n n C13 H13A OLC sing 325 n n C6 H6 OLC sing 326 n n C6 H6A OLC sing 327 n n C14 H14 OLC sing 328 n n C14 H14A OLC sing 329 n n C5 H5 OLC sing 330 n n C5 H5A OLC sing 331 n n C4 H4 OLC sing 332 n n C4 H4A OLC sing 333 n n C3 H3 OLC sing 334 n n C3 H3A OLC sing 335 n n C2 H2 OLC sing 336 n n C2 H2A OLC sing 337 n n C21 H21 OLC sing 338 n n C21 H21A OLC sing 339 n n C22 H22 OLC sing 340 n n O25 HO25 OLC sing 341 n n O23 HO23 OLC sing 342 n n # _atom_sites.entry_id 6EXS _atom_sites.fract_transf_matrix[1][1] 0.016656 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004385 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017993 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010252 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLC A 1 501 1 OLC OLC . C 2 OLC A 1 502 2 OLC OLC . D 2 OLC A 1 503 3 OLC OLC . E 2 OLC A 1 504 5 OLC OLC . F 2 OLC A 1 505 6 OLC OLC . G 2 OLC A 1 506 7 OLC OLC . H 2 OLC A 1 507 8 OLC OLC . I 2 OLC A 1 508 9 OLC OLC . J 2 OLC A 1 509 10 OLC OLC . K 2 OLC A 1 510 11 OLC OLC . L 2 OLC A 1 511 12 OLC OLC . M 2 OLC A 1 512 13 OLC OLC . N 2 OLC A 1 513 14 OLC OLC . O 3 C3H A 1 514 1 C3H C3H . P 4 HOH A 1 601 129 HOH HOH . P 4 HOH A 2 602 107 HOH HOH . P 4 HOH A 3 603 18 HOH HOH . P 4 HOH A 4 604 6 HOH HOH . P 4 HOH A 5 605 100 HOH HOH . P 4 HOH A 6 606 99 HOH HOH . P 4 HOH A 7 607 39 HOH HOH . P 4 HOH A 8 608 3 HOH HOH . P 4 HOH A 9 609 120 HOH HOH . P 4 HOH A 10 610 106 HOH HOH . P 4 HOH A 11 611 119 HOH HOH . P 4 HOH A 12 612 115 HOH HOH . P 4 HOH A 13 613 105 HOH HOH . P 4 HOH A 14 614 50 HOH HOH . P 4 HOH A 15 615 128 HOH HOH . P 4 HOH A 16 616 103 HOH HOH . P 4 HOH A 17 617 32 HOH HOH . P 4 HOH A 18 618 2 HOH HOH . P 4 HOH A 19 619 10 HOH HOH . P 4 HOH A 20 620 97 HOH HOH . P 4 HOH A 21 621 72 HOH HOH . P 4 HOH A 22 622 16 HOH HOH . P 4 HOH A 23 623 1 HOH HOH . P 4 HOH A 24 624 94 HOH HOH . P 4 HOH A 25 625 95 HOH HOH . P 4 HOH A 26 626 9 HOH HOH . P 4 HOH A 27 627 12 HOH HOH . P 4 HOH A 28 628 45 HOH HOH . P 4 HOH A 29 629 33 HOH HOH . P 4 HOH A 30 630 52 HOH HOH . P 4 HOH A 31 631 13 HOH HOH . P 4 HOH A 32 632 34 HOH HOH . P 4 HOH A 33 633 108 HOH HOH . P 4 HOH A 34 634 71 HOH HOH . P 4 HOH A 35 635 122 HOH HOH . P 4 HOH A 36 636 130 HOH HOH . P 4 HOH A 37 637 15 HOH HOH . P 4 HOH A 38 638 125 HOH HOH . P 4 HOH A 39 639 5 HOH HOH . P 4 HOH A 40 640 7 HOH HOH . P 4 HOH A 41 641 42 HOH HOH . P 4 HOH A 42 642 78 HOH HOH . P 4 HOH A 43 643 17 HOH HOH . P 4 HOH A 44 644 98 HOH HOH . P 4 HOH A 45 645 35 HOH HOH . P 4 HOH A 46 646 114 HOH HOH . P 4 HOH A 47 647 127 HOH HOH . P 4 HOH A 48 648 79 HOH HOH . P 4 HOH A 49 649 109 HOH HOH . P 4 HOH A 50 650 123 HOH HOH . P 4 HOH A 51 651 92 HOH HOH . P 4 HOH A 52 652 27 HOH HOH . P 4 HOH A 53 653 102 HOH HOH . P 4 HOH A 54 654 118 HOH HOH . P 4 HOH A 55 655 124 HOH HOH . P 4 HOH A 56 656 101 HOH HOH . P 4 HOH A 57 657 58 HOH HOH . P 4 HOH A 58 658 44 HOH HOH . P 4 HOH A 59 659 14 HOH HOH . P 4 HOH A 60 660 116 HOH HOH . P 4 HOH A 61 661 74 HOH HOH . P 4 HOH A 62 662 36 HOH HOH . P 4 HOH A 63 663 46 HOH HOH . P 4 HOH A 64 664 126 HOH HOH . P 4 HOH A 65 665 112 HOH HOH . P 4 HOH A 66 666 111 HOH HOH . P 4 HOH A 67 667 89 HOH HOH . P 4 HOH A 68 668 121 HOH HOH . P 4 HOH A 69 669 54 HOH HOH . P 4 HOH A 70 670 48 HOH HOH . P 4 HOH A 71 671 47 HOH HOH . P 4 HOH A 72 672 55 HOH HOH . P 4 HOH A 73 673 113 HOH HOH . P 4 HOH A 74 674 23 HOH HOH . P 4 HOH A 75 675 117 HOH HOH . P 4 HOH A 76 676 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . B 2 24.371 4.018 45.872 1 48.17 ? C18 OLC 501 A 1 HETATM 2 C C10 OLC . . . B 2 24.18 13.333 47.33 1 64.8 ? C10 OLC 501 A 1 HETATM 3 C C9 OLC . . . B 2 24.777 14.458 46.939 1 66.27 ? C9 OLC 501 A 1 HETATM 4 C C17 OLC . . . B 2 24.522 5.185 44.921 1 48.88 ? C17 OLC 501 A 1 HETATM 5 C C11 OLC . . . B 2 24.815 12.042 47.795 1 63.15 ? C11 OLC 501 A 1 HETATM 6 C C8 OLC . . . B 2 26.255 14.739 46.834 1 67.48 ? C8 OLC 501 A 1 HETATM 7 C C24 OLC . . . B 2 34.657 21.98 49.648 1 80.32 ? C24 OLC 501 A 1 HETATM 8 C C16 OLC . . . B 2 25.332 6.342 45.476 1 49.62 ? C16 OLC 501 A 1 HETATM 9 C C12 OLC . . . B 2 24.197 10.794 47.147 1 60.82 ? C12 OLC 501 A 1 HETATM 10 C C7 OLC . . . B 2 26.827 15.603 47.964 1 69.46 ? C7 OLC 501 A 1 HETATM 11 C C15 OLC . . . B 2 24.524 7.416 46.189 1 52.35 ? C15 OLC 501 A 1 HETATM 12 C C13 OLC . . . B 2 24.688 9.475 47.725 1 57.51 ? C13 OLC 501 A 1 HETATM 13 C C6 OLC . . . B 2 26.512 17.1 47.9 1 71.13 ? C6 OLC 501 A 1 HETATM 14 C C14 OLC . . . B 2 25.377 8.568 46.712 1 55.32 ? C14 OLC 501 A 1 HETATM 15 C C5 OLC . . . B 2 27.349 17.939 46.93 1 70.45 ? C5 OLC 501 A 1 HETATM 16 C C4 OLC . . . B 2 28.811 18.201 47.305 1 69.41 ? C4 OLC 501 A 1 HETATM 17 C C3 OLC . . . B 2 29.038 19.204 48.428 1 69.51 ? C3 OLC 501 A 1 HETATM 18 C C2 OLC . . . B 2 30.362 19.964 48.313 1 69.3 ? C2 OLC 501 A 1 HETATM 19 C C21 OLC . . . B 2 33.925 19.602 49.142 1 73.78 ? C21 OLC 501 A 1 HETATM 20 C C1 OLC . . . B 2 31.565 19.28 48.902 1 67.68 ? C1 OLC 501 A 1 HETATM 21 C C22 OLC . . . B 2 34.831 20.507 49.954 1 77.32 ? C22 OLC 501 A 1 HETATM 22 O O19 OLC . . . B 2 31.627 18.113 49.179 1 64.93 ? O19 OLC 501 A 1 HETATM 23 O O25 OLC . . . B 2 35.08 22.294 48.327 1 82.62 ? O25 OLC 501 A 1 HETATM 24 O O23 OLC . . . B 2 34.657 20.271 51.352 1 79.16 ? O23 OLC 501 A 1 HETATM 25 O O20 OLC . . . B 2 32.58 20.142 49.059 1 70.9 ? O20 OLC 501 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 25 #